RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 RAPSNQ13702 412 aa13.8□□□□□ -0.2
NIF3L1-205ENST00000409588 VWA2Q5GFL6 755 aa13.8□□□□□ -0.2
NIF3L1-205ENST00000409588 RBM20Q5T481 1227 aaKnown RBP13.8□□□□□ -0.2
NIF3L1-205ENST00000409588 B3GNTL1Q67FW5 361 aaPredicted RBP13.8□□□□□ -0.2
NIF3L1-205ENST00000409588 ISLR2Q6UXK2 745 aa13.8□□□□□ -0.2
NIF3L1-205ENST00000409588 METTL27Q8N6F8 245 aaPredicted RBP13.8□□□□□ -0.2
NIF3L1-205ENST00000409588 AMER3Q8N944 861 aa13.8□□□□□ -0.2
NIF3L1-205ENST00000409588 Q8NA96 180 aa13.8□□□□□ -0.2
NIF3L1-205ENST00000409588 FBXO36Q8NEA4 188 aa13.8□□□□□ -0.2
NIF3L1-205ENST00000409588 SLC13A3Q8WWT9 602 aa13.8□□□□□ -0.2
NIF3L1-205ENST00000409588 METTL21AQ8WXB1 218 aa13.8□□□□□ -0.2
NIF3L1-205ENST00000409588 CDKL2Q92772 493 aa13.8□□□□□ -0.2
NIF3L1-205ENST00000409588 KRT12Q99456 494 aa13.8□□□□□ -0.2
NIF3L1-205ENST00000409588 PHACTR1Q9C0D0 580 aa13.8□□□□□ -0.2
NIF3L1-205ENST00000409588 ILKAPQ9H0C8 392 aaPredicted RBP13.8□□□□□ -0.2
NIF3L1-205ENST00000409588 ATG10Q9H0Y0 220 aa13.8□□□□□ -0.2
NIF3L1-205ENST00000409588 PLAC1Q9HBJ0 212 aa13.8□□□□□ -0.2
NIF3L1-205ENST00000409588 ABCF3Q9NUQ8 709 aa13.8□□□□□ -0.2
NIF3L1-205ENST00000409588 CUEDC1Q9NWM3 386 aaPredicted RBP13.8□□□□□ -0.2
NIF3L1-205ENST00000409588 CCDC88CQ9P219 2028 aa13.8□□□□□ -0.2
NIF3L1-205ENST00000409588 LOC102723996A0A087X1L8 192 aa13.79□□□□□ -0.2
NIF3L1-205ENST00000409588 NSG1A0A0A6YYJ2 146 aa13.79□□□□□ -0.2
NIF3L1-205ENST00000409588 TP73O15350 636 aa13.79□□□□□ -0.2
NIF3L1-205ENST00000409588 SLC35G6P0C7Q6 338 aa13.79□□□□□ -0.2
NIF3L1-205ENST00000409588 HERC3Q15034 1050 aa13.79□□□□□ -0.2
NIF3L1-205ENST00000409588 PHKG1Q16816 387 aa13.79□□□□□ -0.2
NIF3L1-205ENST00000409588 CRB2Q5IJ48 1285 aa13.79□□□□□ -0.2
NIF3L1-205ENST00000409588 HP1BP3Q5SSJ5 553 aaPredicted RBP13.79□□□□□ -0.2
NIF3L1-205ENST00000409588 FHL5Q5TD97 284 aa13.79□□□□□ -0.2
NIF3L1-205ENST00000409588 TMEM214Q6NUQ4 689 aaKnown RBP13.79□□□□□ -0.2
NIF3L1-205ENST00000409588 TRMT10BQ6PF06 316 aaKnown RBP13.79□□□□□ -0.2
NIF3L1-205ENST00000409588 TMEM205Q6UW68 189 aa13.79□□□□□ -0.2
NIF3L1-205ENST00000409588 SHISA6Q6ZSJ9 500 aa13.79□□□□□ -0.2
NIF3L1-205ENST00000409588 ZC3HC1Q86WB0 502 aaKnown RBP13.79□□□□□ -0.2
NIF3L1-205ENST00000409588 MFSD9Q8NBP5 474 aa13.79□□□□□ -0.2
NIF3L1-205ENST00000409588 SPATA4Q8NEY3 305 aa13.79□□□□□ -0.2
NIF3L1-205ENST00000409588 PYROXD1Q8WU10 500 aa13.79□□□□□ -0.2
NIF3L1-205ENST00000409588 THOC3Q96J01 351 aaKnown RBP13.79□□□□□ -0.2
NIF3L1-205ENST00000409588 WDR77Q9BQA1 342 aaPredicted RBP13.79□□□□□ -0.2
NIF3L1-205ENST00000409588 CAPS2Q9BXY5 557 aa13.79□□□□□ -0.2
NIF3L1-205ENST00000409588 ANKHQ9HCJ1 492 aa13.79□□□□□ -0.2
NIF3L1-205ENST00000409588 AGPAT4Q9NRZ5 378 aa13.79□□□□□ -0.2
NIF3L1-205ENST00000409588 RIC8BQ9NVN3 520 aa13.79□□□□□ -0.2
NIF3L1-205ENST00000409588 C19orf25Q9UFG5 118 aaPredicted RBP13.79□□□□□ -0.2
NIF3L1-205ENST00000409588 SNX24Q9Y343 169 aa13.79□□□□□ -0.2
NIF3L1-205ENST00000409588 HEATR5BQ9P2D3 2071 aa13.78□□□□□ -0.2
NIF3L1-205ENST00000409588 NBASA2RRP1 2371 aa13.78□□□□□ -0.2
NIF3L1-205ENST00000409588 A0A0A6YYC8 382 aaPredicted RBP13.78□□□□□ -0.2
NIF3L1-205ENST00000409588 URADA6NGE7 173 aa13.78□□□□□ -0.2
NIF3L1-205ENST00000409588 I3L1I5 382 aaPredicted RBP13.78□□□□□ -0.2
NIF3L1-205ENST00000409588 BMP10O95393 424 aa13.78□□□□□ -0.2
NIF3L1-205ENST00000409588 SERPINA7P05543 415 aa13.78□□□□□ -0.2
NIF3L1-205ENST00000409588 F7P08709 466 aaPredicted RBP13.78□□□□□ -0.2
NIF3L1-205ENST00000409588 ZNF37AP17032 561 aaPredicted RBP13.78□□□□□ -0.2
NIF3L1-205ENST00000409588 CASQ1P31415 396 aa13.78□□□□□ -0.2
NIF3L1-205ENST00000409588 BCL6P41182 706 aa13.78□□□□□ -0.2
NIF3L1-205ENST00000409588 RPL21P46778 160 aaKnown RBP13.78□□□□□ -0.2
NIF3L1-205ENST00000409588 SLC12A2P55011 1212 aa13.78□□□□□ -0.2
NIF3L1-205ENST00000409588 ETF1P62495 437 aaKnown RBP13.78□□□□□ -0.2
NIF3L1-205ENST00000409588 POU4F1Q01851 419 aa13.78□□□□□ -0.2
NIF3L1-205ENST00000409588 MFAP5Q13361 173 aa13.78□□□□□ -0.2
NIF3L1-205ENST00000409588 CSHL1Q14406 222 aa13.78□□□□□ -0.2
NIF3L1-205ENST00000409588 TLR1Q15399 786 aa13.78□□□□□ -0.2
NIF3L1-205ENST00000409588 CDKL4Q5MAI5 379 aa13.78□□□□□ -0.2
NIF3L1-205ENST00000409588 RPUSD3Q6P087 351 aaKnown RBP13.78□□□□□ -0.2
NIF3L1-205ENST00000409588 VN1R4Q7Z5H5 301 aa13.78□□□□□ -0.2
NIF3L1-205ENST00000409588 ASPGQ86U10 573 aa13.78□□□□□ -0.2
NIF3L1-205ENST00000409588 PARP9Q8IXQ6 854 aa13.78□□□□□ -0.2
NIF3L1-205ENST00000409588 ZBED8Q8IZ13 594 aa13.78□□□□□ -0.2
NIF3L1-205ENST00000409588 DNAJB14Q8TBM8 379 aa13.78□□□□□ -0.2
NIF3L1-205ENST00000409588 TSPAN17Q96FV3 270 aa13.78□□□□□ -0.2
NIF3L1-205ENST00000409588 BARD1Q99728 777 aaKnown RBP13.78□□□□□ -0.2
NIF3L1-205ENST00000409588 TRIM51Q9BSJ1 452 aa13.78□□□□□ -0.2
NIF3L1-205ENST00000409588 TUBB6Q9BUF5 446 aa13.78□□□□□ -0.2
NIF3L1-205ENST00000409588 TRIM31Q9BZY9 425 aa13.78□□□□□ -0.2
NIF3L1-205ENST00000409588 ZNF700Q9H0M5 742 aa13.78□□□□□ -0.2
NIF3L1-205ENST00000409588 RHOJQ9H4E5 214 aa13.78□□□□□ -0.2
NIF3L1-205ENST00000409588 TXNDC16Q9P2K2 825 aa13.78□□□□□ -0.2
NIF3L1-205ENST00000409588 PYCARDQ9ULZ3 195 aa13.78□□□□□ -0.2
NIF3L1-205ENST00000409588 UTP11Q9Y3A2 253 aaKnown RBP13.78□□□□□ -0.2
NIF3L1-205ENST00000409588 COPG1Q9Y678 874 aaKnown RBP13.78□□□□□ -0.2
NIF3L1-205ENST00000409588 KCNE2Q9Y6J6 123 aa13.78□□□□□ -0.2
NIF3L1-205ENST00000409588 IGHV1-45A0A0A0MS14 117 aa13.77□□□□□ -0.21
NIF3L1-205ENST00000409588 TRBC2A0A5B9 178 aa13.77□□□□□ -0.21
NIF3L1-205ENST00000409588 CDK2AP1O14519 115 aa13.77□□□□□ -0.21
NIF3L1-205ENST00000409588 WFS1O76024 890 aa13.77□□□□□ -0.21
NIF3L1-205ENST00000409588 AHRP35869 848 aa13.77□□□□□ -0.21
NIF3L1-205ENST00000409588 TSFMP43897 325 aaKnown RBP13.77□□□□□ -0.21
NIF3L1-205ENST00000409588 AGTR2P50052 363 aa13.77□□□□□ -0.21
NIF3L1-205ENST00000409588 FOXL2P58012 376 aa13.77□□□□□ -0.21
NIF3L1-205ENST00000409588 SBSNQ6UWP8 590 aa13.77□□□□□ -0.21
NIF3L1-205ENST00000409588 ADAMTSL2Q86TH1 951 aa13.77□□□□□ -0.21
NIF3L1-205ENST00000409588 PLD3Q8IV08 490 aa13.77□□□□□ -0.21
NIF3L1-205ENST00000409588 ANKMY2Q8IV38 441 aa13.77□□□□□ -0.21
NIF3L1-205ENST00000409588 RP1L1Q8IWN7 2480 aaPredicted RBP13.77□□□□□ -0.21
NIF3L1-205ENST00000409588 TNRC6AQ8NDV7 1962 aaKnown RBP13.77□□□□□ -0.21
NIF3L1-205ENST00000409588 TRPV3Q8NET8 790 aa13.77□□□□□ -0.21
NIF3L1-205ENST00000409588 OR51Q1Q8NH59 317 aa13.77□□□□□ -0.21
NIF3L1-205ENST00000409588 HAS2Q92819 552 aa13.77□□□□□ -0.21
NIF3L1-205ENST00000409588 SNRNP40Q96DI7 357 aaKnown RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms