RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 CAPGP40121 348 aa16.27■□□□□ 0.2
PCDHA13-202ENST00000409494 GALNT1Q10472 559 aaPredicted RBP16.27■□□□□ 0.2
PCDHA13-202ENST00000409494 NDUFAF6Q330K2 333 aa16.27■□□□□ 0.2
PCDHA13-202ENST00000409494 NPWQ8N729 165 aa16.27■□□□□ 0.2
PCDHA13-202ENST00000409494 SLC46A2Q9BY10 475 aa16.27■□□□□ 0.2
PCDHA13-202ENST00000409494 PRAMEF26H0Y7S4 382 aa16.27■□□□□ 0.19
PCDHA13-202ENST00000409494 NTHL1P78549 312 aa16.27■□□□□ 0.19
PCDHA13-202ENST00000409494 SNTA1Q13424 505 aa16.27■□□□□ 0.19
PCDHA13-202ENST00000409494 ZCCHC12Q6PEW1 402 aa16.27■□□□□ 0.19
PCDHA13-202ENST00000409494 DPPA4Q7L190 304 aa16.27■□□□□ 0.19
PCDHA13-202ENST00000409494 PHTF2Q8N3S3 785 aa16.27■□□□□ 0.19
PCDHA13-202ENST00000409494 PACRGLQ8N7B6 248 aa16.27■□□□□ 0.19
PCDHA13-202ENST00000409494 FATE1Q969F0 183 aa16.27■□□□□ 0.19
PCDHA13-202ENST00000409494 PCDHAC1Q9H158 963 aa16.27■□□□□ 0.19
PCDHA13-202ENST00000409494 ZBP1Q9H171 429 aa16.27■□□□□ 0.19
PCDHA13-202ENST00000409494 PREBQ9HCU5 417 aa16.27■□□□□ 0.19
PCDHA13-202ENST00000409494 U3KQV3 271 aa16.27■□□□□ 0.19
PCDHA13-202ENST00000409494 IGLON5A6NGN9 336 aa16.27■□□□□ 0.19
PCDHA13-202ENST00000409494 PGDP52209 483 aa16.27■□□□□ 0.19
PCDHA13-202ENST00000409494 COX10Q12887 443 aa16.27■□□□□ 0.19
PCDHA13-202ENST00000409494 CEP78Q5JTW2 689 aa16.27■□□□□ 0.19
PCDHA13-202ENST00000409494 PLXDC1Q8IUK5 500 aa16.27■□□□□ 0.19
PCDHA13-202ENST00000409494 TTC9BQ8N6N2 239 aa16.27■□□□□ 0.19
PCDHA13-202ENST00000409494 HDHD2Q9H0R4 259 aa16.27■□□□□ 0.19
PCDHA13-202ENST00000409494 GPR34Q9UPC5 381 aa16.27■□□□□ 0.19
PCDHA13-202ENST00000409494 PCDHB3Q9Y5E6 796 aa16.27■□□□□ 0.19
PCDHA13-202ENST00000409494 MAGEB3O15480 346 aa16.26■□□□□ 0.19
PCDHA13-202ENST00000409494 MT-ND1P03886 318 aa16.26■□□□□ 0.19
PCDHA13-202ENST00000409494 CDH1P12830 882 aa16.26■□□□□ 0.19
PCDHA13-202ENST00000409494 GKP32189 559 aa16.26■□□□□ 0.19
PCDHA13-202ENST00000409494 PCLAFQ15004 111 aa16.26■□□□□ 0.19
PCDHA13-202ENST00000409494 SMU1Q2TAY7 513 aa16.26■□□□□ 0.19
PCDHA13-202ENST00000409494 TCEAL5Q5H9L2 206 aa16.26■□□□□ 0.19
PCDHA13-202ENST00000409494 NPAS3Q8IXF0 933 aa16.26■□□□□ 0.19
PCDHA13-202ENST00000409494 OR4C6Q8NH72 309 aa16.26■□□□□ 0.19
PCDHA13-202ENST00000409494 KLHL6Q8WZ60 621 aa16.26■□□□□ 0.19
PCDHA13-202ENST00000409494 CRISPLD1Q9H336 500 aa16.26■□□□□ 0.19
PCDHA13-202ENST00000409494 TMEM45AQ9NWC5 275 aa16.26■□□□□ 0.19
PCDHA13-202ENST00000409494 IL17CQ9P0M4 197 aa16.26■□□□□ 0.19
PCDHA13-202ENST00000409494 ITGB1BP2Q9UKP3 347 aa16.26■□□□□ 0.19
PCDHA13-202ENST00000409494 PDE4DIPQ5VU43 2346 aa16.26■□□□□ 0.19
PCDHA13-202ENST00000409494 BCKDKO14874 412 aa16.26■□□□□ 0.19
PCDHA13-202ENST00000409494 SCAMP1O15126 338 aa16.26■□□□□ 0.19
PCDHA13-202ENST00000409494 NADKO95544 446 aaPredicted RBP16.26■□□□□ 0.19
PCDHA13-202ENST00000409494 TNFRSF4P43489 277 aa16.26■□□□□ 0.19
PCDHA13-202ENST00000409494 ASPGQ86U10 573 aa16.26■□□□□ 0.19
PCDHA13-202ENST00000409494 PLA2G15Q8NCC3 412 aa16.26■□□□□ 0.19
PCDHA13-202ENST00000409494 WDR12Q9GZL7 423 aaKnown RBP16.26■□□□□ 0.19
PCDHA13-202ENST00000409494 BTBD3Q9Y2F9 522 aa16.26■□□□□ 0.19
PCDHA13-202ENST00000409494 PRAMEF12O95522 483 aa16.26■□□□□ 0.19
PCDHA13-202ENST00000409494 CEBPBP17676 345 aa16.26■□□□□ 0.19
PCDHA13-202ENST00000409494 PON2Q15165 354 aa16.26■□□□□ 0.19
PCDHA13-202ENST00000409494 TCTE1Q5JU00 501 aa16.26■□□□□ 0.19
PCDHA13-202ENST00000409494 FAM91A1Q658Y4 838 aa16.26■□□□□ 0.19
PCDHA13-202ENST00000409494 NRROSQ86YC3 692 aa16.26■□□□□ 0.19
PCDHA13-202ENST00000409494 SLC39A13Q96H72 371 aa16.26■□□□□ 0.19
PCDHA13-202ENST00000409494 ABCB10Q9NRK6 738 aa16.26■□□□□ 0.19
PCDHA13-202ENST00000409494 DKK3Q9UBP4 350 aa16.26■□□□□ 0.19
PCDHA13-202ENST00000409494 PHIPQ8WWQ0 1821 aa16.26■□□□□ 0.19
PCDHA13-202ENST00000409494 TRIM3O75382 744 aaPredicted RBP16.25■□□□□ 0.19
PCDHA13-202ENST00000409494 PGRP06401 933 aa16.25■□□□□ 0.19
PCDHA13-202ENST00000409494 DBTP11182 482 aaKnown RBP16.25■□□□□ 0.19
PCDHA13-202ENST00000409494 JUPP14923 745 aa16.25■□□□□ 0.19
PCDHA13-202ENST00000409494 KCNC1P48547 511 aa16.25■□□□□ 0.19
PCDHA13-202ENST00000409494 CRTC1Q6UUV9 634 aa16.25■□□□□ 0.19
PCDHA13-202ENST00000409494 OR4K14Q8NGD5 310 aa16.25■□□□□ 0.19
PCDHA13-202ENST00000409494 SHKBP1Q8TBC3 707 aa16.25■□□□□ 0.19
PCDHA13-202ENST00000409494 KCNC2Q96PR1 638 aa16.25■□□□□ 0.19
PCDHA13-202ENST00000409494 REEP4Q9H6H4 257 aa16.25■□□□□ 0.19
PCDHA13-202ENST00000409494 C14orf105Q9NVL8 296 aa16.25■□□□□ 0.19
PCDHA13-202ENST00000409494 MARK1Q9P0L2 795 aa16.25■□□□□ 0.19
PCDHA13-202ENST00000409494 ZDHHC2Q9UIJ5 367 aa16.25■□□□□ 0.19
PCDHA13-202ENST00000409494 BPIP17213 487 aa16.25■□□□□ 0.19
PCDHA13-202ENST00000409494 RPTNQ6XPR3 784 aa16.25■□□□□ 0.19
PCDHA13-202ENST00000409494 TREML1Q86YW5 311 aa16.25■□□□□ 0.19
PCDHA13-202ENST00000409494 SPATA9Q9BWV2 254 aa16.25■□□□□ 0.19
PCDHA13-202ENST00000409494 PITHD1Q9GZP4 211 aaPredicted RBP16.25■□□□□ 0.19
PCDHA13-202ENST00000409494 JMJD7P0C870 316 aa16.25■□□□□ 0.19
PCDHA13-202ENST00000409494 RAB28P51157 221 aa16.25■□□□□ 0.19
PCDHA13-202ENST00000409494 RPS13P62277 151 aaKnown RBP16.25■□□□□ 0.19
PCDHA13-202ENST00000409494 LRRC26Q2I0M4 334 aa16.25■□□□□ 0.19
PCDHA13-202ENST00000409494 ARMCX6Q7L4S7 300 aa16.25■□□□□ 0.19
PCDHA13-202ENST00000409494 ZNF554Q86TJ5 538 aa16.25■□□□□ 0.19
PCDHA13-202ENST00000409494 MFSD6LQ8IWD5 586 aa16.25■□□□□ 0.19
PCDHA13-202ENST00000409494 PSMA8Q8TAA3 256 aa16.25■□□□□ 0.19
PCDHA13-202ENST00000409494 EZH1Q92800 747 aaPredicted RBP16.25■□□□□ 0.19
PCDHA13-202ENST00000409494 FZD4Q9ULV1 537 aa16.25■□□□□ 0.19
PCDHA13-202ENST00000409494 TMX2-CTNND1H3BSU7 103 aa16.25■□□□□ 0.19
PCDHA13-202ENST00000409494 MID1O15344 667 aa16.25■□□□□ 0.19
PCDHA13-202ENST00000409494 FADS2O95864 444 aaKnown RBP16.25■□□□□ 0.19
PCDHA13-202ENST00000409494 DRD2P14416 443 aa16.25■□□□□ 0.19
PCDHA13-202ENST00000409494 RBBP4Q09028 425 aa16.25■□□□□ 0.19
PCDHA13-202ENST00000409494 KLHL26Q53HC5 615 aa16.25■□□□□ 0.19
PCDHA13-202ENST00000409494 PEG10Q86TG7 708 aaKnown RBP16.25■□□□□ 0.19
PCDHA13-202ENST00000409494 AMIGO1Q86WK6 493 aa16.25■□□□□ 0.19
PCDHA13-202ENST00000409494 OR5P2Q8WZ92 322 aa16.25■□□□□ 0.19
PCDHA13-202ENST00000409494 SLC7A6OSQ96CW6 309 aaPredicted RBP16.25■□□□□ 0.19
PCDHA13-202ENST00000409494 MRPL38Q96DV4 380 aaKnown RBP16.25■□□□□ 0.19
PCDHA13-202ENST00000409494 CDK15Q96Q40 435 aa16.25■□□□□ 0.19
PCDHA13-202ENST00000409494 CD320Q9NPF0 282 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms