RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 NOXRED1Q6NXP6 359 aa8.06□□□□□ -1.12
SNX13-201ENST00000409076 BORAQ6PGQ7 559 aa8.06□□□□□ -1.12
SNX13-201ENST00000409076 FAM131AQ6UXB0 335 aa8.06□□□□□ -1.12
SNX13-201ENST00000409076 CD300LGQ6UXG3 332 aa8.06□□□□□ -1.12
SNX13-201ENST00000409076 USP50Q70EL3 339 aaPredicted RBP8.06□□□□□ -1.12
SNX13-201ENST00000409076 RNF130Q86XS8 419 aa8.06□□□□□ -1.12
SNX13-201ENST00000409076 ANKRD13BQ86YJ7 626 aa8.06□□□□□ -1.12
SNX13-201ENST00000409076 TMEM126BQ8IUX1 230 aa8.06□□□□□ -1.12
SNX13-201ENST00000409076 RHEBL1Q8TAI7 183 aa8.06□□□□□ -1.12
SNX13-201ENST00000409076 GANCQ8TET4 914 aa8.06□□□□□ -1.12
SNX13-201ENST00000409076 C1GALT1C1Q96EU7 318 aa8.06□□□□□ -1.12
SNX13-201ENST00000409076 NEDD4LQ96PU5 975 aa8.06□□□□□ -1.12
SNX13-201ENST00000409076 ZNF347Q96SE7 839 aa8.06□□□□□ -1.12
SNX13-201ENST00000409076 NIPSNAP1Q9BPW8 284 aa8.06□□□□□ -1.12
SNX13-201ENST00000409076 DUSP26Q9BV47 211 aa8.06□□□□□ -1.12
SNX13-201ENST00000409076 ANKRA2Q9H9E1 313 aa8.06□□□□□ -1.12
SNX13-201ENST00000409076 TBC1D17Q9HA65 648 aa8.06□□□□□ -1.12
SNX13-201ENST00000409076 PLSCR3Q9NRY6 295 aa8.06□□□□□ -1.12
SNX13-201ENST00000409076 ENPP5Q9UJA9 477 aa8.06□□□□□ -1.12
SNX13-201ENST00000409076 SLC9A8Q9Y2E8 581 aa8.06□□□□□ -1.12
SNX13-201ENST00000409076 CARD8Q9Y2G2 431 aa8.06□□□□□ -1.12
SNX13-201ENST00000409076 DHRS7Q9Y394 339 aa8.06□□□□□ -1.12
SNX13-201ENST00000409076 UPK1AO00322 258 aa8.05□□□□□ -1.12
SNX13-201ENST00000409076 PCDH17O14917 1159 aa8.05□□□□□ -1.12
SNX13-201ENST00000409076 CPNE3O75131 537 aaKnown RBP8.05□□□□□ -1.12
SNX13-201ENST00000409076 PTHP01270 115 aa8.05□□□□□ -1.12
SNX13-201ENST00000409076 CCDC159P0C7I6 412 aa8.05□□□□□ -1.12
SNX13-201ENST00000409076 HLA-EP13747 358 aa8.05□□□□□ -1.12
SNX13-201ENST00000409076 GSTM2P28161 218 aa8.05□□□□□ -1.12
SNX13-201ENST00000409076 CCR7P32248 378 aa8.05□□□□□ -1.12
SNX13-201ENST00000409076 RPL34P49207 117 aaKnown RBP8.05□□□□□ -1.12
SNX13-201ENST00000409076 CDH4P55283 916 aa8.05□□□□□ -1.12
SNX13-201ENST00000409076 RPL26P61254 145 aaKnown RBP8.05□□□□□ -1.12
SNX13-201ENST00000409076 FKBP1BP68106 108 aa8.05□□□□□ -1.12
SNX13-201ENST00000409076 RUNX1T1Q06455 604 aa8.05□□□□□ -1.12
SNX13-201ENST00000409076 IL18R1Q13478 541 aa8.05□□□□□ -1.12
SNX13-201ENST00000409076 BPIFB1Q8TDL5 484 aa8.05□□□□□ -1.12
SNX13-201ENST00000409076 TRUB1Q8WWH5 349 aaKnown RBP8.05□□□□□ -1.12
SNX13-201ENST00000409076 HDAC2Q92769 488 aaKnown RBP8.05□□□□□ -1.12
SNX13-201ENST00000409076 SLC39A13Q96H72 371 aa8.05□□□□□ -1.12
SNX13-201ENST00000409076 WDR12Q9GZL7 423 aaKnown RBP8.05□□□□□ -1.12
SNX13-201ENST00000409076 MAGEH1Q9H213 219 aa8.05□□□□□ -1.12
SNX13-201ENST00000409076 MRM3Q9HC36 420 aaKnown RBP8.05□□□□□ -1.12
SNX13-201ENST00000409076 VPS9D1Q9Y2B5 631 aa8.05□□□□□ -1.12
SNX13-201ENST00000409076 A0A1W2PPK0 400 aa8.05□□□□□ -1.12
SNX13-201ENST00000409076 IQCA1LA6NCM1 817 aa8.05□□□□□ -1.12
SNX13-201ENST00000409076 DUSP11O75319 330 aaKnown RBP8.05□□□□□ -1.12
SNX13-201ENST00000409076 PDHA2P29803 388 aa8.05□□□□□ -1.12
SNX13-201ENST00000409076 KDELR2P33947 212 aa8.05□□□□□ -1.12
SNX13-201ENST00000409076 TMBIM6P55061 237 aa8.05□□□□□ -1.12
SNX13-201ENST00000409076 MAP4K2Q12851 820 aa8.05□□□□□ -1.12
SNX13-201ENST00000409076 NPRL3Q12980 569 aa8.05□□□□□ -1.12
SNX13-201ENST00000409076 ZNF404Q494X3 552 aa8.05□□□□□ -1.12
SNX13-201ENST00000409076 RETSATQ6NUM9 610 aa8.05□□□□□ -1.12
SNX13-201ENST00000409076 SERINC5Q86VE9 423 aa8.05□□□□□ -1.12
SNX13-201ENST00000409076 ARMC8Q8IUR7 673 aa8.05□□□□□ -1.12
SNX13-201ENST00000409076 AQP11Q8NBQ7 271 aa8.05□□□□□ -1.12
SNX13-201ENST00000409076 NUSAP1Q9BXS6 441 aaKnown RBP8.05□□□□□ -1.12
SNX13-201ENST00000409076 TMEM221A6NGB7 291 aa8.05□□□□□ -1.12
SNX13-201ENST00000409076 KIAA0513O60268 411 aa8.05□□□□□ -1.12
SNX13-201ENST00000409076 PLOD3O60568 738 aa8.05□□□□□ -1.12
SNX13-201ENST00000409076 SCELO95171 688 aa8.05□□□□□ -1.12
SNX13-201ENST00000409076 NTN1O95631 604 aa8.05□□□□□ -1.12
SNX13-201ENST00000409076 OR56A5P0C7T3 313 aa8.05□□□□□ -1.12
SNX13-201ENST00000409076 SERPINA4P29622 427 aa8.05□□□□□ -1.12
SNX13-201ENST00000409076 SPAM1P38567 509 aa8.05□□□□□ -1.12
SNX13-201ENST00000409076 GJA8P48165 433 aa8.05□□□□□ -1.12
SNX13-201ENST00000409076 CLCN7P51798 805 aa8.05□□□□□ -1.12
SNX13-201ENST00000409076 ISL1P61371 349 aa8.05□□□□□ -1.12
SNX13-201ENST00000409076 GSTM4Q03013 218 aa8.05□□□□□ -1.12
SNX13-201ENST00000409076 RBM48Q5RL73 367 aaKnown RBP8.05□□□□□ -1.12
SNX13-201ENST00000409076 ZNF57Q68EA5 555 aaPredicted RBP8.05□□□□□ -1.12
SNX13-201ENST00000409076 RD3Q7Z3Z2 195 aa8.05□□□□□ -1.12
SNX13-201ENST00000409076 NLGN4YQ8NFZ3 816 aaPredicted RBP8.05□□□□□ -1.12
SNX13-201ENST00000409076 POF1BQ8WVV4 589 aa8.05□□□□□ -1.12
SNX13-201ENST00000409076 KCNJ9Q92806 393 aa8.05□□□□□ -1.12
SNX13-201ENST00000409076 RHBDF1Q96CC6 855 aa8.05□□□□□ -1.12
SNX13-201ENST00000409076 TRMT61BQ9BVS5 477 aaKnown RBP8.05□□□□□ -1.12
SNX13-201ENST00000409076 KCNK12Q9HB15 430 aa8.05□□□□□ -1.12
SNX13-201ENST00000409076 KLHL1Q9NR64 748 aa8.05□□□□□ -1.12
SNX13-201ENST00000409076 TMEM184CQ9NVA4 438 aa8.05□□□□□ -1.12
SNX13-201ENST00000409076 IL17CQ9P0M4 197 aa8.05□□□□□ -1.12
SNX13-201ENST00000409076 B4GALT6Q9UBX8 382 aa8.05□□□□□ -1.12
SNX13-201ENST00000409076 YARS2Q9Y2Z4 477 aaKnown RBP8.05□□□□□ -1.12
SNX13-201ENST00000409076 MEN1O00255 615 aa8.04□□□□□ -1.12
SNX13-201ENST00000409076 GFRA2O00451 464 aa8.04□□□□□ -1.12
SNX13-201ENST00000409076 GMFGO60234 142 aa8.04□□□□□ -1.12
SNX13-201ENST00000409076 BCHEP06276 602 aa8.04□□□□□ -1.12
SNX13-201ENST00000409076 GRK5P34947 590 aa8.04□□□□□ -1.12
SNX13-201ENST00000409076 BUD31P41223 144 aaPredicted RBP8.04□□□□□ -1.12
SNX13-201ENST00000409076 CSTF3Q12996 717 aaKnown RBP8.04□□□□□ -1.12
SNX13-201ENST00000409076 KRT33BQ14525 404 aa8.04□□□□□ -1.12
SNX13-201ENST00000409076 ADGRF1Q5T601 910 aa8.04□□□□□ -1.12
SNX13-201ENST00000409076 FRG2Q64ET8 278 aa8.04□□□□□ -1.12
SNX13-201ENST00000409076 PAMR1Q6UXH9 720 aa8.04□□□□□ -1.12
SNX13-201ENST00000409076 HACD2Q6Y1H2 254 aa8.04□□□□□ -1.12
SNX13-201ENST00000409076 DPY19L3Q6ZPD9 716 aa8.04□□□□□ -1.12
SNX13-201ENST00000409076 ASB18Q6ZVZ8 466 aa8.04□□□□□ -1.12
SNX13-201ENST00000409076 RNF180Q86T96 592 aa8.04□□□□□ -1.12
SNX13-201ENST00000409076 SVOPQ8N4V2 548 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms