RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 HEBP2Q9Y5Z4 205 aa9.32□□□□□ -0.92
NIF3L1-202ENST00000409020 PIKFYVEQ9Y2I7 2098 aa9.32□□□□□ -0.92
NIF3L1-202ENST00000409020 SPTBP11277 2137 aa9.32□□□□□ -0.92
NIF3L1-202ENST00000409020 HNRNPCL2B2RXH8 293 aa9.32□□□□□ -0.92
NIF3L1-202ENST00000409020 K7EM74 188 aa9.32□□□□□ -0.92
NIF3L1-202ENST00000409020 MAST4O15021 2626 aa9.32□□□□□ -0.92
NIF3L1-202ENST00000409020 HNRNPCL1O60812 293 aaKnown RBP9.32□□□□□ -0.92
NIF3L1-202ENST00000409020 SCRG1O75711 98 aa9.32□□□□□ -0.92
NIF3L1-202ENST00000409020 KRT75O95678 551 aa9.32□□□□□ -0.92
NIF3L1-202ENST00000409020 CHEK2O96017 543 aa9.32□□□□□ -0.92
NIF3L1-202ENST00000409020 SFTPCP11686 197 aa9.32□□□□□ -0.92
NIF3L1-202ENST00000409020 TCN2P20062 427 aa9.32□□□□□ -0.92
NIF3L1-202ENST00000409020 CDH3P22223 829 aa9.32□□□□□ -0.92
NIF3L1-202ENST00000409020 MGAT1P26572 445 aa9.32□□□□□ -0.92
NIF3L1-202ENST00000409020 NDUFS1P28331 727 aa9.32□□□□□ -0.92
NIF3L1-202ENST00000409020 ACY1Q03154 408 aa9.32□□□□□ -0.92
NIF3L1-202ENST00000409020 DHX9Q08211 1270 aaKnown RBP9.32□□□□□ -0.92
NIF3L1-202ENST00000409020 RPA4Q13156 261 aa9.32□□□□□ -0.92
NIF3L1-202ENST00000409020 IL10RAQ13651 578 aa9.32□□□□□ -0.92
NIF3L1-202ENST00000409020 ZIC1Q15915 447 aa9.32□□□□□ -0.92
NIF3L1-202ENST00000409020 DEFB110Q30KQ9 67 aa9.32□□□□□ -0.92
NIF3L1-202ENST00000409020 SYTL3Q4VX76 610 aa9.32□□□□□ -0.92
NIF3L1-202ENST00000409020 PPP4R4Q6NUP7 873 aa9.32□□□□□ -0.92
NIF3L1-202ENST00000409020 ARMC6Q6NXE6 501 aa9.32□□□□□ -0.92
NIF3L1-202ENST00000409020 DRICH1Q6PGQ1 229 aaPredicted RBP9.32□□□□□ -0.92
NIF3L1-202ENST00000409020 UNC5AQ6ZN44 842 aa9.32□□□□□ -0.92
NIF3L1-202ENST00000409020 CDHR3Q6ZTQ4 885 aa9.32□□□□□ -0.92
NIF3L1-202ENST00000409020 GSTA5Q7RTV2 222 aa9.32□□□□□ -0.92
NIF3L1-202ENST00000409020 MPP5Q8N3R9 675 aa9.32□□□□□ -0.92
NIF3L1-202ENST00000409020 PPHLN1Q8NEY8 458 aaKnown RBP9.32□□□□□ -0.92
NIF3L1-202ENST00000409020 TBC1D20Q96BZ9 403 aa9.32□□□□□ -0.92
NIF3L1-202ENST00000409020 INTS12Q96CB8 462 aaKnown RBP9.32□□□□□ -0.92
NIF3L1-202ENST00000409020 PBKQ96KB5 322 aa9.32□□□□□ -0.92
NIF3L1-202ENST00000409020 MOGAT1Q96PD6 335 aa9.32□□□□□ -0.92
NIF3L1-202ENST00000409020 AP1M1Q9BXS5 423 aa9.32□□□□□ -0.92
NIF3L1-202ENST00000409020 PITPNM3Q9BZ71 974 aa9.32□□□□□ -0.92
NIF3L1-202ENST00000409020 TRIT1Q9H3H1 467 aaKnown RBP9.32□□□□□ -0.92
NIF3L1-202ENST00000409020 ACTL8Q9H568 366 aa9.32□□□□□ -0.92
NIF3L1-202ENST00000409020 VPS37BQ9H9H4 285 aa9.32□□□□□ -0.92
NIF3L1-202ENST00000409020 FAM60AQ9NP50 221 aa9.32□□□□□ -0.92
NIF3L1-202ENST00000409020 TREX1Q9NSU2 369 aa9.32□□□□□ -0.92
NIF3L1-202ENST00000409020 SELENONQ9NZV5 590 aa9.32□□□□□ -0.92
NIF3L1-202ENST00000409020 KCNN3Q9UGI6 736 aa9.32□□□□□ -0.92
NIF3L1-202ENST00000409020 ZC3H7BQ9UGR2 993 aaKnown RBP9.32□□□□□ -0.92
NIF3L1-202ENST00000409020 PADI1Q9ULC6 663 aa9.32□□□□□ -0.92
NIF3L1-202ENST00000409020 FAF1Q9UNN5 650 aaPredicted RBP9.32□□□□□ -0.92
NIF3L1-202ENST00000409020 RUVBL2Q9Y230 463 aaKnown RBP9.32□□□□□ -0.92
NIF3L1-202ENST00000409020 ASF1AQ9Y294 204 aa9.32□□□□□ -0.92
NIF3L1-202ENST00000409020 DRG1Q9Y295 367 aaKnown RBP9.32□□□□□ -0.92
NIF3L1-202ENST00000409020 BTRCQ9Y297 605 aa9.32□□□□□ -0.92
NIF3L1-202ENST00000409020 TDRKHQ9Y2W6 561 aaKnown RBP9.32□□□□□ -0.92
NIF3L1-202ENST00000409020 USP9XQ93008 2570 aaPredicted RBP9.31□□□□□ -0.92
NIF3L1-202ENST00000409020 TMEM150CB9EJG8 249 aa9.31□□□□□ -0.92
NIF3L1-202ENST00000409020 RGS13O14921 159 aa9.31□□□□□ -0.92
NIF3L1-202ENST00000409020 SLC22A1O15245 554 aa9.31□□□□□ -0.92
NIF3L1-202ENST00000409020 MAGEB3O15480 346 aa9.31□□□□□ -0.92
NIF3L1-202ENST00000409020 DNAJB5O75953 348 aa9.31□□□□□ -0.92
NIF3L1-202ENST00000409020 FTH1P02794 183 aa9.31□□□□□ -0.92
NIF3L1-202ENST00000409020 OR56A5P0C7T3 313 aa9.31□□□□□ -0.92
NIF3L1-202ENST00000409020 UGT2B7P16662 529 aa9.31□□□□□ -0.92
NIF3L1-202ENST00000409020 CRABP2P29373 138 aa9.31□□□□□ -0.92
NIF3L1-202ENST00000409020 EVI2BP34910 448 aa9.31□□□□□ -0.92
NIF3L1-202ENST00000409020 CCR10P46092 362 aa9.31□□□□□ -0.92
NIF3L1-202ENST00000409020 PRKAA1Q13131 559 aa9.31□□□□□ -0.92
NIF3L1-202ENST00000409020 DNASE1L3Q13609 305 aa9.31□□□□□ -0.92
NIF3L1-202ENST00000409020 GRB7Q14451 532 aa9.31□□□□□ -0.92
NIF3L1-202ENST00000409020 SQLEQ14534 574 aa9.31□□□□□ -0.92
NIF3L1-202ENST00000409020 KRT71Q3SY84 523 aa9.31□□□□□ -0.92
NIF3L1-202ENST00000409020 FASTKD1Q53R41 847 aaKnown RBP9.31□□□□□ -0.92
NIF3L1-202ENST00000409020 METTL11BQ5VVY1 283 aa9.31□□□□□ -0.92
NIF3L1-202ENST00000409020 KMT5CQ86Y97 462 aa9.31□□□□□ -0.92
NIF3L1-202ENST00000409020 TMEM126BQ8IUX1 230 aa9.31□□□□□ -0.92
NIF3L1-202ENST00000409020 C2orf73Q8N5S3 287 aaPredicted RBP9.31□□□□□ -0.92
NIF3L1-202ENST00000409020 CPSF7Q8N684 471 aaKnown RBP9.31□□□□□ -0.92
NIF3L1-202ENST00000409020 EIF1ADQ8N9N8 165 aaKnown RBP9.31□□□□□ -0.92
NIF3L1-202ENST00000409020 LINC01555Q8NAE3 123 aa9.31□□□□□ -0.92
NIF3L1-202ENST00000409020 MFSD3Q96ES6 412 aa9.31□□□□□ -0.92
NIF3L1-202ENST00000409020 IL17FQ96PD4 163 aa9.31□□□□□ -0.92
NIF3L1-202ENST00000409020 OR2A14Q96R47 310 aa9.31□□□□□ -0.92
NIF3L1-202ENST00000409020 NEURL2Q9BR09 285 aa9.31□□□□□ -0.92
NIF3L1-202ENST00000409020 SLC25A18Q9H1K4 315 aa9.31□□□□□ -0.92
NIF3L1-202ENST00000409020 MVB12BQ9H7P6 319 aa9.31□□□□□ -0.92
NIF3L1-202ENST00000409020 EIF2B3Q9NR50 452 aaKnown RBP9.31□□□□□ -0.92
NIF3L1-202ENST00000409020 CATSPERZQ9NTU4 200 aa9.31□□□□□ -0.92
NIF3L1-202ENST00000409020 NMRK1Q9NWW6 199 aa9.31□□□□□ -0.92
NIF3L1-202ENST00000409020 ACTR10Q9NZ32 417 aa9.31□□□□□ -0.92
NIF3L1-202ENST00000409020 NKX1-2Q9UD57 310 aaPredicted RBP9.31□□□□□ -0.92
NIF3L1-202ENST00000409020 KLHL20Q9Y2M5 609 aa9.31□□□□□ -0.92
NIF3L1-202ENST00000409020 ANGPTL3Q9Y5C1 460 aa9.31□□□□□ -0.92
NIF3L1-202ENST00000409020 PCDHGA11Q9Y5H2 935 aa9.31□□□□□ -0.92
NIF3L1-202ENST00000409020 PTPN13Q12923 2485 aa9.31□□□□□ -0.92
NIF3L1-202ENST00000409020 ARHGAP10A1A4S6 786 aa9.3□□□□□ -0.92
NIF3L1-202ENST00000409020 PIPSLA2A3N6 862 aa9.3□□□□□ -0.92
NIF3L1-202ENST00000409020 CDC14CA4D256 554 aa9.3□□□□□ -0.92
NIF3L1-202ENST00000409020 J3QKU1 62 aa9.3□□□□□ -0.92
NIF3L1-202ENST00000409020 CD3EAPO15446 510 aaKnown RBP9.3□□□□□ -0.92
NIF3L1-202ENST00000409020 ICMTO60725 284 aa9.3□□□□□ -0.92
NIF3L1-202ENST00000409020 CREG1O75629 220 aa9.3□□□□□ -0.92
NIF3L1-202ENST00000409020 TMEM63AO94886 807 aa9.3□□□□□ -0.92
NIF3L1-202ENST00000409020 OR5F1O95221 314 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms