RNA–Protein interactions for RNA: ENST00000401730.5

SNRNP70-202, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 2

Gene SNRNP70, Length 3,144 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-202ENST00000401730 GABRR3A8MPY1 467 aa16.45■□□□□ 0.22
SNRNP70-202ENST00000401730 J3KTA2 159 aa16.45■□□□□ 0.22
SNRNP70-202ENST00000401730 CCNDBP1O95273 360 aa16.45■□□□□ 0.22
SNRNP70-202ENST00000401730 SLC16A8O95907 504 aa16.45■□□□□ 0.22
SNRNP70-202ENST00000401730 TGFB1P01137 390 aa16.45■□□□□ 0.22
SNRNP70-202ENST00000401730 PABPC1P11940 636 aaKnown RBP16.45■□□□□ 0.22
SNRNP70-202ENST00000401730 ETFAP13804 333 aa16.45■□□□□ 0.22
SNRNP70-202ENST00000401730 POU1F1P28069 291 aa16.45■□□□□ 0.22
SNRNP70-202ENST00000401730 HOXA9P31269 272 aa16.45■□□□□ 0.22
SNRNP70-202ENST00000401730 NKX3-2P78367 333 aa16.45■□□□□ 0.22
SNRNP70-202ENST00000401730 DEFB103AP81534 67 aa16.45■□□□□ 0.22
SNRNP70-202ENST00000401730 SLC13A2Q13183 592 aa16.45■□□□□ 0.22
SNRNP70-202ENST00000401730 GAB1Q13480 694 aa16.45■□□□□ 0.22
SNRNP70-202ENST00000401730 GANABQ14697 944 aaKnown RBP16.45■□□□□ 0.22
SNRNP70-202ENST00000401730 SF3B4Q15427 424 aaKnown RBP eCLIP16.45■□□□□ 0.223e-15■■■■□ 26.2
SNRNP70-202ENST00000401730 PRSS36Q5K4E3 855 aa16.45■□□□□ 0.22
SNRNP70-202ENST00000401730 THOC6Q86W42 341 aaKnown RBP16.45■□□□□ 0.22
SNRNP70-202ENST00000401730 CMTM7Q96FZ5 175 aa16.45■□□□□ 0.22
SNRNP70-202ENST00000401730 SLC12A9Q9BXP2 914 aa16.45■□□□□ 0.22
SNRNP70-202ENST00000401730 C6orf62Q9GZU0 229 aaPredicted RBP16.45■□□□□ 0.22
SNRNP70-202ENST00000401730 GPN2Q9H9Y4 310 aaPredicted RBP16.45■□□□□ 0.22
SNRNP70-202ENST00000401730 IL1RAPQ9NPH3 570 aa16.45■□□□□ 0.22
SNRNP70-202ENST00000401730 VPS29Q9UBQ0 182 aa16.45■□□□□ 0.22
SNRNP70-202ENST00000401730 PRKAB1Q9Y478 270 aa16.45■□□□□ 0.22
SNRNP70-202ENST00000401730 MAP4K5Q9Y4K4 846 aa16.45■□□□□ 0.22
SNRNP70-202ENST00000401730 SOBPA7XYQ1 873 aa16.45■□□□□ 0.22
SNRNP70-202ENST00000401730 ARHGEF33A8MVX0 844 aa16.45■□□□□ 0.22
SNRNP70-202ENST00000401730 WNT9AO14904 365 aa16.45■□□□□ 0.22
SNRNP70-202ENST00000401730 SOD2P04179 222 aa16.45■□□□□ 0.22
SNRNP70-202ENST00000401730 CD36P16671 472 aa16.45■□□□□ 0.22
SNRNP70-202ENST00000401730 SPINT3P49223 89 aa16.45■□□□□ 0.22
SNRNP70-202ENST00000401730 CLK1P49759 484 aaKnown RBP16.45■□□□□ 0.22
SNRNP70-202ENST00000401730 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.45■□□□□ 0.22
SNRNP70-202ENST00000401730 SHQ1Q6PI26 577 aaKnown RBP16.45■□□□□ 0.22
SNRNP70-202ENST00000401730 PLD3Q8IV08 490 aa16.45■□□□□ 0.22
SNRNP70-202ENST00000401730 MMP21Q8N119 569 aa16.45■□□□□ 0.22
SNRNP70-202ENST00000401730 CLIP4Q8N3C7 705 aa16.45■□□□□ 0.22
SNRNP70-202ENST00000401730 MARCH7Q9H992 704 aa16.45■□□□□ 0.22
SNRNP70-202ENST00000401730 ZBTB20Q9HC78 741 aaPredicted RBP16.45■□□□□ 0.22
SNRNP70-202ENST00000401730 USE1Q9NZ43 259 aa16.45■□□□□ 0.22
SNRNP70-202ENST00000401730 CCDC88CQ9P219 2028 aa16.45■□□□□ 0.22
SNRNP70-202ENST00000401730 GRXCR2A6NFK2 248 aa16.45■□□□□ 0.22
SNRNP70-202ENST00000401730 PLK4O00444 970 aa16.45■□□□□ 0.22
SNRNP70-202ENST00000401730 PRPS2P11908 318 aa16.45■□□□□ 0.22
SNRNP70-202ENST00000401730 CYP2A7P20853 494 aa16.45■□□□□ 0.22
SNRNP70-202ENST00000401730 WNT3P56703 355 aa16.45■□□□□ 0.22
SNRNP70-202ENST00000401730 MADCAM1Q13477 382 aa16.45■□□□□ 0.22
SNRNP70-202ENST00000401730 ARSIQ5FYB1 569 aa16.45■□□□□ 0.22
SNRNP70-202ENST00000401730 SYTL1Q8IYJ3 562 aa16.45■□□□□ 0.22
SNRNP70-202ENST00000401730 DNASE1L2Q92874 299 aa16.45■□□□□ 0.22
SNRNP70-202ENST00000401730 TCEAL4Q96EI5 215 aa16.45■□□□□ 0.22
SNRNP70-202ENST00000401730 TMEM175Q9BSA9 504 aa16.45■□□□□ 0.22
SNRNP70-202ENST00000401730 DUSP26Q9BV47 211 aa16.45■□□□□ 0.22
SNRNP70-202ENST00000401730 OR51B5Q9H339 312 aa16.45■□□□□ 0.22
SNRNP70-202ENST00000401730 BACE2Q9Y5Z0 518 aa16.45■□□□□ 0.22
SNRNP70-202ENST00000401730 PMF1-BGLAPU3KQ54 211 aa16.45■□□□□ 0.22
SNRNP70-202ENST00000401730 MYO9BQ13459 2157 aa16.44■□□□□ 0.22
SNRNP70-202ENST00000401730 KCNE1BA0A087WTH5 132 aa16.44■□□□□ 0.22
SNRNP70-202ENST00000401730 MGAT4DA6NG13 374 aa16.44■□□□□ 0.22
SNRNP70-202ENST00000401730 LEFTY2O00292 366 aa16.44■□□□□ 0.22
SNRNP70-202ENST00000401730 UGT2B11O75310 529 aa16.44■□□□□ 0.22
SNRNP70-202ENST00000401730 BMP4P12644 408 aa16.44■□□□□ 0.22
SNRNP70-202ENST00000401730 CRISP3P54108 245 aa16.44■□□□□ 0.22
SNRNP70-202ENST00000401730 EPS8Q12929 822 aa16.44■□□□□ 0.22
SNRNP70-202ENST00000401730 CBX2Q14781 532 aaPredicted RBP16.44■□□□□ 0.22
SNRNP70-202ENST00000401730 LRIF1Q5T3J3 769 aa16.44■□□□□ 0.22
SNRNP70-202ENST00000401730 P3H2Q8IVL5 708 aa16.44■□□□□ 0.22
SNRNP70-202ENST00000401730 GTPBP3Q969Y2 492 aaKnown RBP16.44■□□□□ 0.22
SNRNP70-202ENST00000401730 CIDECQ96AQ7 238 aaPredicted RBP16.44■□□□□ 0.22
SNRNP70-202ENST00000401730 SORBS1Q9BX66 1292 aaKnown RBP16.44■□□□□ 0.22
SNRNP70-202ENST00000401730 SLC46A2Q9BY10 475 aa16.44■□□□□ 0.22
SNRNP70-202ENST00000401730 SLC29A3Q9BZD2 475 aa16.44■□□□□ 0.22
SNRNP70-202ENST00000401730 TRIT1Q9H3H1 467 aaKnown RBP16.44■□□□□ 0.22
SNRNP70-202ENST00000401730 SPASTQ9UBP0 616 aa16.44■□□□□ 0.22
SNRNP70-202ENST00000401730 TMED5Q9Y3A6 229 aa16.44■□□□□ 0.22
SNRNP70-202ENST00000401730 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.44■□□□□ 0.22
SNRNP70-202ENST00000401730 FAM227AF5H4B4 570 aa16.44■□□□□ 0.22
SNRNP70-202ENST00000401730 HOXA2O43364 376 aa16.44■□□□□ 0.22
SNRNP70-202ENST00000401730 RGS10O43665 173 aa16.44■□□□□ 0.22
SNRNP70-202ENST00000401730 CDH12P55289 794 aa16.44■□□□□ 0.22
SNRNP70-202ENST00000401730 RPS13P62277 151 aaKnown RBP16.44■□□□□ 0.22
SNRNP70-202ENST00000401730 TUBA3CQ13748 450 aa16.44■□□□□ 0.22
SNRNP70-202ENST00000401730 HMGN2P46Q86SG4 172 aa16.44■□□□□ 0.22
SNRNP70-202ENST00000401730 OVCA2Q8WZ82 227 aa16.44■□□□□ 0.22
SNRNP70-202ENST00000401730 STARD8Q92502 1023 aa16.44■□□□□ 0.22
SNRNP70-202ENST00000401730 FEVQ99581 238 aa16.44■□□□□ 0.22
SNRNP70-202ENST00000401730 FAM83DQ9H4H8 585 aa16.44■□□□□ 0.22
SNRNP70-202ENST00000401730 EHD1Q9H4M9 534 aa16.44■□□□□ 0.22
SNRNP70-202ENST00000401730 HMG20AQ9NP66 347 aa16.44■□□□□ 0.22
SNRNP70-202ENST00000401730 RAD18Q9NS91 495 aa16.44■□□□□ 0.22
SNRNP70-202ENST00000401730 TPRKBQ9Y3C4 175 aa16.44■□□□□ 0.22
SNRNP70-202ENST00000401730 TTC34A8MYJ7 566 aa16.43■□□□□ 0.22
SNRNP70-202ENST00000401730 SOAT1P35610 550 aa16.43■□□□□ 0.22
SNRNP70-202ENST00000401730 METAP1P53582 386 aa16.43■□□□□ 0.22
SNRNP70-202ENST00000401730 CPTPQ5TA50 214 aa16.43■□□□□ 0.22
SNRNP70-202ENST00000401730 ZNF697Q5TEC3 545 aa16.43■□□□□ 0.22
SNRNP70-202ENST00000401730 AGTRAPQ6RW13 159 aa16.43■□□□□ 0.22
SNRNP70-202ENST00000401730 Q6ZNB5 142 aa16.43■□□□□ 0.22
SNRNP70-202ENST00000401730 RDH14Q9HBH5 336 aa16.43■□□□□ 0.22
SNRNP70-202ENST00000401730 HCFC2Q9Y5Z7 792 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms