RNA–Protein interactions for RNA: ENST00000400301.5

USP48-204, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 1 (best) BASIC

Gene USP48, Length 4,309 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-204ENST00000400301 GET4Q7L5D6 327 aaPredicted RBP17.93■□□□□ 0.46
USP48-204ENST00000400301 IL4I1Q96RQ9 567 aa17.93■□□□□ 0.46
USP48-204ENST00000400301 WDR70Q9NW82 654 aa17.93■□□□□ 0.46
USP48-204ENST00000400301 DLGAP4Q9Y2H0 992 aa17.93■□□□□ 0.46
USP48-204ENST00000400301 CCNYL3P0C7X3 344 aa17.93■□□□□ 0.46
USP48-204ENST00000400301 PSRC1Q6PGN9 363 aaPredicted RBP17.93■□□□□ 0.46
USP48-204ENST00000400301 BORAQ6PGQ7 559 aa17.93■□□□□ 0.46
USP48-204ENST00000400301 GRASPQ7Z6J2 395 aaPredicted RBP17.93■□□□□ 0.46
USP48-204ENST00000400301 GATAD2AQ86YP4 633 aa17.93■□□□□ 0.46
USP48-204ENST00000400301 ST13P5Q8NFI4 369 aaPredicted RBP17.93■□□□□ 0.46
USP48-204ENST00000400301 CXorf40BQ96DE9 158 aa17.93■□□□□ 0.46
USP48-204ENST00000400301 OSBPL10Q9BXB5 764 aa17.93■□□□□ 0.46
USP48-204ENST00000400301 ACPTQ9BZG2 426 aa17.93■□□□□ 0.46
USP48-204ENST00000400301 DCSTAMPQ9H295 470 aa17.93■□□□□ 0.46
USP48-204ENST00000400301 ERVK-18Q9QC07 812 aa17.93■□□□□ 0.46
USP48-204ENST00000400301 LOC110117498-PIK3R3F6TDL0 507 aa17.93■□□□□ 0.46
USP48-204ENST00000400301 PEX11BO96011 259 aa17.93■□□□□ 0.46
USP48-204ENST00000400301 SMIM18P0DKX4 95 aa17.93■□□□□ 0.46
USP48-204ENST00000400301 ADH5P11766 374 aa17.93■□□□□ 0.46
USP48-204ENST00000400301 HK3P52790 923 aa17.93■□□□□ 0.46
USP48-204ENST00000400301 FAM219BQ5XKK7 198 aa17.93■□□□□ 0.46
USP48-204ENST00000400301 C10orf53Q8N6V4 93 aa17.93■□□□□ 0.46
USP48-204ENST00000400301 LKAAEAR1Q8TD35 194 aa17.93■□□□□ 0.46
USP48-204ENST00000400301 GEMIN6Q8WXD5 167 aaKnown RBP17.93■□□□□ 0.46
USP48-204ENST00000400301 ZBED6CLQ96FA7 236 aaPredicted RBP17.93■□□□□ 0.46
USP48-204ENST00000400301 ERVW-1Q9UQF0 538 aa17.93■□□□□ 0.46
USP48-204ENST00000400301 VILLO15195 856 aa17.92■□□□□ 0.46
USP48-204ENST00000400301 TGM5O43548 720 aa17.92■□□□□ 0.46
USP48-204ENST00000400301 PSMA1P25786 263 aaKnown RBP17.92■□□□□ 0.46
USP48-204ENST00000400301 TLX1P31314 330 aaPredicted RBP17.92■□□□□ 0.46
USP48-204ENST00000400301 VBP1P61758 197 aa17.92■□□□□ 0.46
USP48-204ENST00000400301 SNAPC1Q16533 368 aa17.92■□□□□ 0.46
USP48-204ENST00000400301 SLC22A15Q8IZD6 547 aa17.92■□□□□ 0.46
USP48-204ENST00000400301 SLC5A11Q8WWX8 675 aa17.92■□□□□ 0.46
USP48-204ENST00000400301 TFGQ92734 400 aaPredicted RBP17.92■□□□□ 0.46
USP48-204ENST00000400301 KLK6Q92876 244 aa17.92■□□□□ 0.46
USP48-204ENST00000400301 COL21A1Q96P44 957 aa17.92■□□□□ 0.46
USP48-204ENST00000400301 NTMT1Q9BV86 223 aa17.92■□□□□ 0.46
USP48-204ENST00000400301 NPLQ9BXD5 320 aaPredicted RBP17.92■□□□□ 0.46
USP48-204ENST00000400301 TAC3Q9UHF0 121 aa17.92■□□□□ 0.46
USP48-204ENST00000400301 ZNF780BQ9Y6R6 833 aa17.92■□□□□ 0.46
USP48-204ENST00000400301 SLC1A7O00341 560 aa17.92■□□□□ 0.46
USP48-204ENST00000400301 RPLP0P05388 317 aaKnown RBP17.92■□□□□ 0.46
USP48-204ENST00000400301 LAMP1P11279 417 aa17.92■□□□□ 0.46
USP48-204ENST00000400301 CCR7P32248 378 aa17.92■□□□□ 0.46
USP48-204ENST00000400301 TALDO1P37837 337 aa17.92■□□□□ 0.46
USP48-204ENST00000400301 MAP2K4P45985 399 aa17.92■□□□□ 0.46
USP48-204ENST00000400301 UGT3A2Q3SY77 523 aa17.92■□□□□ 0.46
USP48-204ENST00000400301 CYP27C1Q4G0S4 372 aa17.92■□□□□ 0.46
USP48-204ENST00000400301 NHSL2Q5HYW2 709 aa17.92■□□□□ 0.46
USP48-204ENST00000400301 RNFT2Q96EX2 444 aa17.92■□□□□ 0.46
USP48-204ENST00000400301 EGLN2Q96KS0 407 aa17.92■□□□□ 0.46
USP48-204ENST00000400301 C3orf14Q9HBI5 128 aa17.92■□□□□ 0.46
USP48-204ENST00000400301 ZCCHC3Q9NUD5 404 aaKnown RBP17.92■□□□□ 0.46
USP48-204ENST00000400301 CDV3Q9UKY7 258 aaKnown RBP17.92■□□□□ 0.46
USP48-204ENST00000400301 POFUT2Q9Y2G5 429 aa17.92■□□□□ 0.46
USP48-204ENST00000400301 AGRPO00253 132 aa17.92■□□□□ 0.46
USP48-204ENST00000400301 OR7A17O14581 309 aa17.92■□□□□ 0.46
USP48-204ENST00000400301 TBX1O43435 398 aa17.92■□□□□ 0.46
USP48-204ENST00000400301 AP1G1O43747 822 aa17.92■□□□□ 0.46
USP48-204ENST00000400301 NME6O75414 186 aaPredicted RBP17.92■□□□□ 0.46
USP48-204ENST00000400301 SERPINI2O75830 405 aa17.92■□□□□ 0.46
USP48-204ENST00000400301 INMTO95050 263 aa17.92■□□□□ 0.46
USP48-204ENST00000400301 PRLP01236 227 aa17.92■□□□□ 0.46
USP48-204ENST00000400301 RETP07949 1114 aa17.92■□□□□ 0.46
USP48-204ENST00000400301 CSF2RAP15509 400 aa17.92■□□□□ 0.46
USP48-204ENST00000400301 SDC1P18827 310 aa17.92■□□□□ 0.46
USP48-204ENST00000400301 ZNF805Q5CZA5 627 aa17.92■□□□□ 0.46
USP48-204ENST00000400301 CXorf57Q6NSI4 855 aaKnown RBP17.92■□□□□ 0.46
USP48-204ENST00000400301 SBSNQ6UWP8 590 aa17.92■□□□□ 0.46
USP48-204ENST00000400301 TRAM1L1Q8N609 369 aa17.92■□□□□ 0.46
USP48-204ENST00000400301 METTL25Q8N6Q8 603 aa17.92■□□□□ 0.46
USP48-204ENST00000400301 OR9A1PQ8NGU1 263 aa17.92■□□□□ 0.46
USP48-204ENST00000400301 ENKURQ8TC29 256 aa17.92■□□□□ 0.46
USP48-204ENST00000400301 C1GALT1C1Q96EU7 318 aa17.92■□□□□ 0.46
USP48-204ENST00000400301 PKMYT1Q99640 499 aa17.92■□□□□ 0.46
USP48-204ENST00000400301 MAGIXQ9H6Y5 334 aa17.92■□□□□ 0.46
USP48-204ENST00000400301 SPATA7Q9P0W8 599 aa17.92■□□□□ 0.46
USP48-204ENST00000400301 ABCD2Q9UBJ2 740 aa17.92■□□□□ 0.46
USP48-204ENST00000400301 PCDHB11Q9Y5F2 797 aa17.92■□□□□ 0.46
USP48-204ENST00000400301 KIAA0100Q14667 2235 aaKnown RBP17.91■□□□□ 0.46
USP48-204ENST00000400301 TBC1D3DA0A087WVF3 549 aa17.91■□□□□ 0.46
USP48-204ENST00000400301 TBC1D3IA0A087WXS9 549 aa17.91■□□□□ 0.46
USP48-204ENST00000400301 TBC1D3EA0A087X179 549 aa17.91■□□□□ 0.46
USP48-204ENST00000400301 TBC1D3KA0A087X1G2 549 aa17.91■□□□□ 0.46
USP48-204ENST00000400301 TBC1D3FA6NER0 549 aaPredicted RBP17.91■□□□□ 0.46
USP48-204ENST00000400301 TTC34A8MYJ7 566 aa17.91■□□□□ 0.46
USP48-204ENST00000400301 TBC1D3LB9A6J9 549 aa17.91■□□□□ 0.46
USP48-204ENST00000400301 SNPHO15079 494 aa17.91■□□□□ 0.46
USP48-204ENST00000400301 TMCC2O75069 709 aa17.91■□□□□ 0.46
USP48-204ENST00000400301 TBC1D3HP0C7X1 549 aa17.91■□□□□ 0.46
USP48-204ENST00000400301 CDK4P11802 303 aa17.91■□□□□ 0.46
USP48-204ENST00000400301 SFSWAPQ12872 951 aaKnown RBP17.91■□□□□ 0.46
USP48-204ENST00000400301 RUNDC3AQ59EK9 446 aa17.91■□□□□ 0.46
USP48-204ENST00000400301 TBC1D3GQ6DHY5 549 aa17.91■□□□□ 0.46
USP48-204ENST00000400301 TBC1D3CQ6IPX1 549 aa17.91■□□□□ 0.46
USP48-204ENST00000400301 ATG14Q6ZNE5 492 aa17.91■□□□□ 0.46
USP48-204ENST00000400301 FAM92BQ6ZTR7 304 aa17.91■□□□□ 0.46
USP48-204ENST00000400301 TBC1D3Q8IZP1 549 aaPredicted RBP17.91■□□□□ 0.46
USP48-204ENST00000400301 TMEM151AQ8N4L1 468 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms