RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 TNFSF15O95150 251 aa7.19□□□□□ -1.26
USP16-204ENST00000399976 SYF2O95926 243 aaKnown RBP7.19□□□□□ -1.26
USP16-204ENST00000399976 SLC35G6P0C7Q6 338 aa7.19□□□□□ -1.26
USP16-204ENST00000399976 GFAPP14136 432 aa7.19□□□□□ -1.26
USP16-204ENST00000399976 CPA3P15088 417 aa7.19□□□□□ -1.26
USP16-204ENST00000399976 FOLR1P15328 257 aa7.19□□□□□ -1.26
USP16-204ENST00000399976 TRA2BP62995 288 aaKnown RBP7.19□□□□□ -1.26
USP16-204ENST00000399976 TRAF3Q13114 568 aa7.19□□□□□ -1.26
USP16-204ENST00000399976 MUM1Q2TAK8 710 aa7.19□□□□□ -1.26
USP16-204ENST00000399976 CEP85LQ5SZL2 805 aa7.19□□□□□ -1.26
USP16-204ENST00000399976 C6orf15Q6UXA7 325 aaPredicted RBP7.19□□□□□ -1.26
USP16-204ENST00000399976 UNQ6494/PRO21346Q6UXR6 183 aa7.19□□□□□ -1.26
USP16-204ENST00000399976 RGS9BPQ6ZS82 235 aa7.19□□□□□ -1.26
USP16-204ENST00000399976 USP53Q70EK8 1073 aa7.19□□□□□ -1.26
USP16-204ENST00000399976 GOLGA7Q7Z5G4 137 aa7.19□□□□□ -1.26
USP16-204ENST00000399976 ZNF761Q86XN6 746 aaPredicted RBP7.19□□□□□ -1.26
USP16-204ENST00000399976 NLGN4XQ8N0W4 816 aa7.19□□□□□ -1.26
USP16-204ENST00000399976 PTGR2Q8N8N7 351 aaPredicted RBP7.19□□□□□ -1.26
USP16-204ENST00000399976 NLGN4YQ8NFZ3 816 aaPredicted RBP7.19□□□□□ -1.26
USP16-204ENST00000399976 OR1L3Q8NH93 324 aa7.19□□□□□ -1.26
USP16-204ENST00000399976 WDR20Q8TBZ3 569 aa7.19□□□□□ -1.26
USP16-204ENST00000399976 NAT14Q8WUY8 206 aa7.19□□□□□ -1.26
USP16-204ENST00000399976 USP7Q93009 1102 aa7.19□□□□□ -1.26
USP16-204ENST00000399976 WBP1Q96G27 269 aa7.19□□□□□ -1.26
USP16-204ENST00000399976 VPS50Q96JG6 964 aa7.19□□□□□ -1.26
USP16-204ENST00000399976 GBP5Q96PP8 586 aa7.19□□□□□ -1.26
USP16-204ENST00000399976 OR6C1Q96RD1 312 aa7.19□□□□□ -1.26
USP16-204ENST00000399976 DRC3Q9H069 523 aa7.19□□□□□ -1.26
USP16-204ENST00000399976 NMRK1Q9NWW6 199 aa7.19□□□□□ -1.26
USP16-204ENST00000399976 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.19□□□□□ -1.26
USP16-204ENST00000399976 V9GYY5 206 aaPredicted RBP7.19□□□□□ -1.26
USP16-204ENST00000399976 TRABD2BA6NFA1 517 aa7.18□□□□□ -1.26
USP16-204ENST00000399976 AGPSO00116 658 aa7.18□□□□□ -1.26
USP16-204ENST00000399976 TRIM13O60858 407 aa7.18□□□□□ -1.26
USP16-204ENST00000399976 CTSVO60911 334 aa7.18□□□□□ -1.26
USP16-204ENST00000399976 CLDN9O95484 217 aa7.18□□□□□ -1.26
USP16-204ENST00000399976 ESRRBO95718 433 aa7.18□□□□□ -1.26
USP16-204ENST00000399976 SLC5A2P31639 672 aa7.18□□□□□ -1.26
USP16-204ENST00000399976 PPP1CAP62136 330 aa7.18□□□□□ -1.26
USP16-204ENST00000399976 IFT88Q13099 833 aa7.18□□□□□ -1.26
USP16-204ENST00000399976 DSG2Q14126 1118 aa7.18□□□□□ -1.26
USP16-204ENST00000399976 PCLAFQ15004 111 aa7.18□□□□□ -1.26
USP16-204ENST00000399976 MRPL14Q6P1L8 145 aaKnown RBP7.18□□□□□ -1.26
USP16-204ENST00000399976 MED27Q6P2C8 311 aa7.18□□□□□ -1.26
USP16-204ENST00000399976 TMIGD1Q6UXZ0 262 aa7.18□□□□□ -1.26
USP16-204ENST00000399976 ABHD13Q7L211 337 aa7.18□□□□□ -1.26
USP16-204ENST00000399976 VN1R4Q7Z5H5 301 aa7.18□□□□□ -1.26
USP16-204ENST00000399976 HPS6Q86YV9 775 aa7.18□□□□□ -1.26
USP16-204ENST00000399976 ZCCHC7Q8N3Z6 543 aaKnown RBP7.18□□□□□ -1.26
USP16-204ENST00000399976 GBP7Q8N8V2 638 aaPredicted RBP7.18□□□□□ -1.26
USP16-204ENST00000399976 LSM14AQ8ND56 463 aaKnown RBP7.18□□□□□ -1.26
USP16-204ENST00000399976 FCRL1Q96LA6 429 aa7.18□□□□□ -1.26
USP16-204ENST00000399976 ATP6V1G3Q96LB4 118 aa7.18□□□□□ -1.26
USP16-204ENST00000399976 SERPINI1Q99574 410 aa7.18□□□□□ -1.26
USP16-204ENST00000399976 GSTO2Q9H4Y5 243 aa7.18□□□□□ -1.26
USP16-204ENST00000399976 EML4Q9HC35 981 aaKnown RBP7.18□□□□□ -1.26
USP16-204ENST00000399976 LYRM4Q9HD34 91 aa7.18□□□□□ -1.26
USP16-204ENST00000399976 FAM60AQ9NP50 221 aa7.18□□□□□ -1.26
USP16-204ENST00000399976 PFDN4Q9NQP4 134 aa7.18□□□□□ -1.26
USP16-204ENST00000399976 SOHLH2Q9NX45 425 aa7.18□□□□□ -1.26
USP16-204ENST00000399976 KCND3Q9UK17 655 aa7.18□□□□□ -1.26
USP16-204ENST00000399976 SLC22A14Q9Y267 594 aa7.18□□□□□ -1.26
USP16-204ENST00000399976 PADI2Q9Y2J8 665 aa7.18□□□□□ -1.26
USP16-204ENST00000399976 A0A0C4DFX4 3053 aa7.18□□□□□ -1.26
USP16-204ENST00000399976 FER1L5A0AVI2 2057 aa7.18□□□□□ -1.26
USP16-204ENST00000399976 TK2O00142 265 aa7.18□□□□□ -1.26
USP16-204ENST00000399976 OR7A17O14581 309 aa7.18□□□□□ -1.26
USP16-204ENST00000399976 HAT1O14929 419 aa7.18□□□□□ -1.26
USP16-204ENST00000399976 OR2B3O76000 313 aa7.18□□□□□ -1.26
USP16-204ENST00000399976 BPGMP07738 259 aa7.18□□□□□ -1.26
USP16-204ENST00000399976 CDH1P12830 882 aa7.18□□□□□ -1.26
USP16-204ENST00000399976 SAT1P21673 171 aa7.18□□□□□ -1.26
USP16-204ENST00000399976 GALNSP34059 522 aa7.18□□□□□ -1.26
USP16-204ENST00000399976 EIF2S3P41091 472 aaKnown RBP7.18□□□□□ -1.26
USP16-204ENST00000399976 ETV5P41161 510 aa7.18□□□□□ -1.26
USP16-204ENST00000399976 RCN2Q14257 317 aa7.18□□□□□ -1.26
USP16-204ENST00000399976 UNC50Q53HI1 259 aa7.18□□□□□ -1.26
USP16-204ENST00000399976 SYVN1Q86TM6 617 aa7.18□□□□□ -1.26
USP16-204ENST00000399976 PROSER1Q86XN7 944 aa7.18□□□□□ -1.26
USP16-204ENST00000399976 CMTM7Q96FZ5 175 aa7.18□□□□□ -1.26
USP16-204ENST00000399976 CATSPER2Q96P56 530 aa7.18□□□□□ -1.26
USP16-204ENST00000399976 QRFPRQ96P65 431 aa7.18□□□□□ -1.26
USP16-204ENST00000399976 NDC1Q9BTX1 674 aa7.18□□□□□ -1.26
USP16-204ENST00000399976 MKKSQ9NPJ1 570 aaPredicted RBP7.18□□□□□ -1.26
USP16-204ENST00000399976 SNX6Q9UNH7 406 aa7.18□□□□□ -1.26
USP16-204ENST00000399976 GON4LQ3T8J9 2241 aa7.18□□□□□ -1.26
USP16-204ENST00000399976 CPAMD8Q8IZJ3 1885 aa7.17□□□□□ -1.26
USP16-204ENST00000399976 MED19A0JLT2 244 aaPredicted RBP7.17□□□□□ -1.26
USP16-204ENST00000399976 TMEM150CB9EJG8 249 aa7.17□□□□□ -1.26
USP16-204ENST00000399976 H0YGG7 62 aa7.17□□□□□ -1.26
USP16-204ENST00000399976 KIF1CO43896 1103 aaKnown RBP7.17□□□□□ -1.26
USP16-204ENST00000399976 PRAMEF10O60809 474 aa7.17□□□□□ -1.26
USP16-204ENST00000399976 SCRG1O75711 98 aa7.17□□□□□ -1.26
USP16-204ENST00000399976 F7P08709 466 aaPredicted RBP7.17□□□□□ -1.26
USP16-204ENST00000399976 NEFHP12036 1026 aa7.17□□□□□ -1.26
USP16-204ENST00000399976 AGXTP21549 392 aa7.17□□□□□ -1.26
USP16-204ENST00000399976 EEF1DP29692 281 aaKnown RBP7.17□□□□□ -1.26
USP16-204ENST00000399976 BCL6P41182 706 aa7.17□□□□□ -1.26
USP16-204ENST00000399976 HSPA7P48741 367 aa7.17□□□□□ -1.26
USP16-204ENST00000399976 ARF3P61204 181 aaPredicted RBP7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms