RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 OR1F1O43749 312 aa13.4□□□□□ -0.26
HLA-DQB1-202ENST00000399079 LTA4HP09960 611 aaKnown RBP13.4□□□□□ -0.26
HLA-DQB1-202ENST00000399079 PIM1P11309 404 aaPredicted RBP13.4□□□□□ -0.26
HLA-DQB1-202ENST00000399079 VARSP26640 1264 aaKnown RBP13.4□□□□□ -0.26
HLA-DQB1-202ENST00000399079 TYK2P29597 1187 aa13.4□□□□□ -0.26
HLA-DQB1-202ENST00000399079 GLRBP48167 497 aa13.4□□□□□ -0.26
HLA-DQB1-202ENST00000399079 HSPA7P48741 367 aa13.4□□□□□ -0.26
HLA-DQB1-202ENST00000399079 EMP3P54852 163 aa13.4□□□□□ -0.26
HLA-DQB1-202ENST00000399079 KCNAB2Q13303 367 aa13.4□□□□□ -0.26
HLA-DQB1-202ENST00000399079 ATP1A4Q13733 1029 aa13.4□□□□□ -0.26
HLA-DQB1-202ENST00000399079 SSPNQ14714 243 aa13.4□□□□□ -0.26
HLA-DQB1-202ENST00000399079 VWA2Q5GFL6 755 aa13.4□□□□□ -0.26
HLA-DQB1-202ENST00000399079 PRMT9Q6P2P2 845 aa13.4□□□□□ -0.26
HLA-DQB1-202ENST00000399079 PRSS41Q7RTY9 318 aa13.4□□□□□ -0.26
HLA-DQB1-202ENST00000399079 TMPRSS11BQ86T26 416 aa13.4□□□□□ -0.26
HLA-DQB1-202ENST00000399079 SHISA5Q8N114 240 aa13.4□□□□□ -0.26
HLA-DQB1-202ENST00000399079 KCT2Q8NC54 265 aa13.4□□□□□ -0.26
HLA-DQB1-202ENST00000399079 STAG3L4Q8TBR4 150 aa13.4□□□□□ -0.26
HLA-DQB1-202ENST00000399079 SLC13A3Q8WWT9 602 aa13.4□□□□□ -0.26
HLA-DQB1-202ENST00000399079 FKBP10Q96AY3 582 aa13.4□□□□□ -0.26
HLA-DQB1-202ENST00000399079 TM4SF19Q96DZ7 209 aa13.4□□□□□ -0.26
HLA-DQB1-202ENST00000399079 MMABQ96EY8 250 aaPredicted RBP13.4□□□□□ -0.26
HLA-DQB1-202ENST00000399079 ABHD17AQ96GS6 310 aa13.4□□□□□ -0.26
HLA-DQB1-202ENST00000399079 DRC3Q9H069 523 aa13.4□□□□□ -0.26
HLA-DQB1-202ENST00000399079 SLC26A1Q9H2B4 701 aa13.4□□□□□ -0.26
HLA-DQB1-202ENST00000399079 NMRAL1Q9HBL8 299 aa13.4□□□□□ -0.26
HLA-DQB1-202ENST00000399079 WWOXQ9NZC7 414 aa13.4□□□□□ -0.26
HLA-DQB1-202ENST00000399079 TLK1Q9UKI8 766 aa13.4□□□□□ -0.26
HLA-DQB1-202ENST00000399079 DYRK1BQ9Y463 629 aa13.4□□□□□ -0.26
HLA-DQB1-202ENST00000399079 KCNE2Q9Y6J6 123 aa13.4□□□□□ -0.26
HLA-DQB1-202ENST00000399079 A0A087WUV0 522 aaPredicted RBP13.39□□□□□ -0.27
HLA-DQB1-202ENST00000399079 A0A096LPK6 155 aa13.39□□□□□ -0.27
HLA-DQB1-202ENST00000399079 MASP2O00187 686 aa13.39□□□□□ -0.27
HLA-DQB1-202ENST00000399079 TXNDC9O14530 226 aa13.39□□□□□ -0.27
HLA-DQB1-202ENST00000399079 RIPK2O43353 540 aa13.39□□□□□ -0.27
HLA-DQB1-202ENST00000399079 ALBP02768 609 aa13.39□□□□□ -0.27
HLA-DQB1-202ENST00000399079 FBLP22087 321 aaKnown RBP13.39□□□□□ -0.27
HLA-DQB1-202ENST00000399079 MSH2P43246 934 aa13.39□□□□□ -0.27
HLA-DQB1-202ENST00000399079 PMS2P54278 862 aa13.39□□□□□ -0.27
HLA-DQB1-202ENST00000399079 NFATC3Q12968 1075 aa13.39□□□□□ -0.27
HLA-DQB1-202ENST00000399079 SYT16Q17RD7 645 aa13.39□□□□□ -0.27
HLA-DQB1-202ENST00000399079 GARNL3Q5VVW2 1013 aa13.39□□□□□ -0.27
HLA-DQB1-202ENST00000399079 NXPE4Q6UWF7 544 aa13.39□□□□□ -0.27
HLA-DQB1-202ENST00000399079 ASPGQ86U10 573 aa13.39□□□□□ -0.27
HLA-DQB1-202ENST00000399079 PRSS58Q8IYP2 241 aa13.39□□□□□ -0.27
HLA-DQB1-202ENST00000399079 AMER3Q8N944 861 aa13.39□□□□□ -0.27
HLA-DQB1-202ENST00000399079 MFSD9Q8NBP5 474 aa13.39□□□□□ -0.27
HLA-DQB1-202ENST00000399079 OR9A4Q8NGU2 314 aa13.39□□□□□ -0.27
HLA-DQB1-202ENST00000399079 DCAKDQ8WVC6 231 aa13.39□□□□□ -0.27
HLA-DQB1-202ENST00000399079 THAP11Q96EK4 314 aa13.39□□□□□ -0.27
HLA-DQB1-202ENST00000399079 ATOH8Q96SQ7 321 aa13.39□□□□□ -0.27
HLA-DQB1-202ENST00000399079 MESP1Q9BRJ9 268 aa13.39□□□□□ -0.27
HLA-DQB1-202ENST00000399079 ING2Q9H160 280 aa13.39□□□□□ -0.27
HLA-DQB1-202ENST00000399079 SLC25A18Q9H1K4 315 aa13.39□□□□□ -0.27
HLA-DQB1-202ENST00000399079 ADNPQ9H2P0 1102 aa13.39□□□□□ -0.27
HLA-DQB1-202ENST00000399079 WDR54Q9H977 334 aa13.39□□□□□ -0.27
HLA-DQB1-202ENST00000399079 ZNF71Q9NQZ8 489 aaPredicted RBP13.39□□□□□ -0.27
HLA-DQB1-202ENST00000399079 PTBP2Q9UKA9 531 aaKnown RBP13.39□□□□□ -0.27
HLA-DQB1-202ENST00000399079 ASB1Q9Y576 335 aa13.39□□□□□ -0.27
HLA-DQB1-202ENST00000399079 IKBKGQ9Y6K9 419 aa13.39□□□□□ -0.27
HLA-DQB1-202ENST00000399079 A0A087X1B8 175 aa13.39□□□□□ -0.27
HLA-DQB1-202ENST00000399079 EXOC1LA0A1B0GW35 172 aa13.39□□□□□ -0.27
HLA-DQB1-202ENST00000399079 TRBC2A0A5B9 178 aa13.39□□□□□ -0.27
HLA-DQB1-202ENST00000399079 VSTM2BA6NLU5 285 aa13.39□□□□□ -0.27
HLA-DQB1-202ENST00000399079 K7EM74 188 aa13.39□□□□□ -0.27
HLA-DQB1-202ENST00000399079 UBXN8O00124 270 aa13.39□□□□□ -0.27
HLA-DQB1-202ENST00000399079 NDUFS4O43181 175 aa13.39□□□□□ -0.27
HLA-DQB1-202ENST00000399079 SERPIND1P05546 499 aa13.39□□□□□ -0.27
HLA-DQB1-202ENST00000399079 CD63P08962 238 aa13.39□□□□□ -0.27
HLA-DQB1-202ENST00000399079 IL1RNP18510 177 aa13.39□□□□□ -0.27
HLA-DQB1-202ENST00000399079 GGT5P36269 586 aa13.39□□□□□ -0.27
HLA-DQB1-202ENST00000399079 SLC26A3P40879 764 aa13.39□□□□□ -0.27
HLA-DQB1-202ENST00000399079 SERPINB8P50452 374 aa13.39□□□□□ -0.27
HLA-DQB1-202ENST00000399079 CCL11P51671 97 aa13.39□□□□□ -0.27
HLA-DQB1-202ENST00000399079 MAT1AQ00266 395 aaKnown RBP13.39□□□□□ -0.27
HLA-DQB1-202ENST00000399079 DSG2Q14126 1118 aa13.39□□□□□ -0.27
HLA-DQB1-202ENST00000399079 FAM53BQ14153 422 aa13.39□□□□□ -0.27
HLA-DQB1-202ENST00000399079 SULT1C3Q6IMI6 304 aa13.39□□□□□ -0.27
HLA-DQB1-202ENST00000399079 TMEM214Q6NUQ4 689 aaKnown RBP13.39□□□□□ -0.27
HLA-DQB1-202ENST00000399079 TRMT10CQ7L0Y3 403 aaKnown RBP13.39□□□□□ -0.27
HLA-DQB1-202ENST00000399079 MRGPREQ86SM8 312 aa13.39□□□□□ -0.27
HLA-DQB1-202ENST00000399079 LAPTM4BQ86VI4 370 aa13.39□□□□□ -0.27
HLA-DQB1-202ENST00000399079 RAB43Q86YS6 212 aa13.39□□□□□ -0.27
HLA-DQB1-202ENST00000399079 APLFQ8IW19 511 aaPredicted RBP13.39□□□□□ -0.27
HLA-DQB1-202ENST00000399079 PLD6Q8N2A8 252 aaKnown RBP13.39□□□□□ -0.27
HLA-DQB1-202ENST00000399079 ANKRD53Q8N9V6 530 aa13.39□□□□□ -0.27
HLA-DQB1-202ENST00000399079 CAMKVQ8NCB2 501 aa13.39□□□□□ -0.27
HLA-DQB1-202ENST00000399079 PDPRQ8NCN5 879 aa13.39□□□□□ -0.27
HLA-DQB1-202ENST00000399079 ZCCHC10Q8TBK6 192 aa13.39□□□□□ -0.27
HLA-DQB1-202ENST00000399079 STT3BQ8TCJ2 826 aa13.39□□□□□ -0.27
HLA-DQB1-202ENST00000399079 MVB12AQ96EY5 273 aa13.39□□□□□ -0.27
HLA-DQB1-202ENST00000399079 SARGQ9BW04 601 aa13.39□□□□□ -0.27
HLA-DQB1-202ENST00000399079 YIPF2Q9BWQ6 316 aa13.39□□□□□ -0.27
HLA-DQB1-202ENST00000399079 TXLNGYQ9BZA5 131 aa13.39□□□□□ -0.27
HLA-DQB1-202ENST00000399079 VPS11Q9H270 941 aa13.39□□□□□ -0.27
HLA-DQB1-202ENST00000399079 PELI2Q9HAT8 420 aa13.39□□□□□ -0.27
HLA-DQB1-202ENST00000399079 ZNF358Q9NW07 568 aa13.39□□□□□ -0.27
HLA-DQB1-202ENST00000399079 TRPC4Q9UBN4 977 aa13.39□□□□□ -0.27
HLA-DQB1-202ENST00000399079 ZNF282Q9UDV7 671 aaPredicted RBP13.39□□□□□ -0.27
HLA-DQB1-202ENST00000399079 MED13Q9UHV7 2174 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms