RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 ZSCAN32Q9NX65 697 aa13.78□□□□□ -0.2
PCDHGA11-201ENST00000398587 SAGE2PA6NJ88 616 aa13.78□□□□□ -0.2
PCDHGA11-201ENST00000398587 TMEM150CB9EJG8 249 aa13.78□□□□□ -0.2
PCDHGA11-201ENST00000398587 CLDN25C9JDP6 229 aa13.78□□□□□ -0.2
PCDHGA11-201ENST00000398587 GBAP04062 536 aa13.78□□□□□ -0.2
PCDHGA11-201ENST00000398587 DGKEP52429 567 aa13.78□□□□□ -0.2
PCDHGA11-201ENST00000398587 COQ5Q5HYK3 327 aa13.78□□□□□ -0.2
PCDHGA11-201ENST00000398587 LINC00471Q8N535 108 aa13.78□□□□□ -0.2
PCDHGA11-201ENST00000398587 KCNN1Q92952 543 aa13.78□□□□□ -0.2
PCDHGA11-201ENST00000398587 COX4I2Q96KJ9 171 aa13.78□□□□□ -0.2
PCDHGA11-201ENST00000398587 TTC34A8MYJ7 566 aa13.78□□□□□ -0.2
PCDHGA11-201ENST00000398587 AURKAO14965 403 aa13.78□□□□□ -0.2
PCDHGA11-201ENST00000398587 SRCP12931 536 aa13.78□□□□□ -0.2
PCDHGA11-201ENST00000398587 JUPP14923 745 aa13.78□□□□□ -0.2
PCDHGA11-201ENST00000398587 FMO3P31513 532 aa13.78□□□□□ -0.2
PCDHGA11-201ENST00000398587 CCT3P49368 545 aaKnown RBP13.78□□□□□ -0.2
PCDHGA11-201ENST00000398587 VEGFBP49765 207 aa13.78□□□□□ -0.2
PCDHGA11-201ENST00000398587 GALK1P51570 392 aa13.78□□□□□ -0.2
PCDHGA11-201ENST00000398587 PCDH1Q08174 1060 aa13.78□□□□□ -0.2
PCDHGA11-201ENST00000398587 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.78□□□□□ -0.2
PCDHGA11-201ENST00000398587 OR4E2Q8NGC2 313 aa13.78□□□□□ -0.2
PCDHGA11-201ENST00000398587 NFKBIDQ8NI38 313 aa13.78□□□□□ -0.2
PCDHGA11-201ENST00000398587 STON2Q8WXE9 905 aa13.78□□□□□ -0.2
PCDHGA11-201ENST00000398587 IKZF2Q9UKS7 526 aa13.78□□□□□ -0.2
PCDHGA11-201ENST00000398587 C6orf47O95873 294 aa13.78□□□□□ -0.2
PCDHGA11-201ENST00000398587 PTGES3Q15185 160 aaKnown RBP13.78□□□□□ -0.2
PCDHGA11-201ENST00000398587 TOR1AIP1Q5JTV8 583 aa13.78□□□□□ -0.2
PCDHGA11-201ENST00000398587 FBXO46Q6PJ61 603 aaPredicted RBP13.78□□□□□ -0.2
PCDHGA11-201ENST00000398587 LINC01465Q8N7H1 131 aa13.78□□□□□ -0.2
PCDHGA11-201ENST00000398587 OR10H5Q8NGA6 315 aa13.78□□□□□ -0.2
PCDHGA11-201ENST00000398587 GAL3ST4Q96RP7 486 aa13.78□□□□□ -0.2
PCDHGA11-201ENST00000398587 PKP4Q99569 1192 aa13.78□□□□□ -0.2
PCDHGA11-201ENST00000398587 SGIP1Q9BQI5 828 aa13.78□□□□□ -0.2
PCDHGA11-201ENST00000398587 RPF2Q9H7B2 306 aaKnown RBP13.78□□□□□ -0.2
PCDHGA11-201ENST00000398587 TM9SF3Q9HD45 589 aa13.78□□□□□ -0.2
PCDHGA11-201ENST00000398587 CCM2LQ9NUG4 571 aaPredicted RBP13.78□□□□□ -0.2
PCDHGA11-201ENST00000398587 PCTPQ9UKL6 214 aa13.78□□□□□ -0.2
PCDHGA11-201ENST00000398587 CAPN5O15484 640 aaPredicted RBP13.77□□□□□ -0.2
PCDHGA11-201ENST00000398587 DFNA5O60443 496 aa13.77□□□□□ -0.2
PCDHGA11-201ENST00000398587 PDYNP01213 254 aa13.77□□□□□ -0.2
PCDHGA11-201ENST00000398587 HMGN1P05114 100 aa13.77□□□□□ -0.2
PCDHGA11-201ENST00000398587 RAB8AP61006 207 aa13.77□□□□□ -0.2
PCDHGA11-201ENST00000398587 BTN3A2P78410 334 aa13.77□□□□□ -0.2
PCDHGA11-201ENST00000398587 MYBPC1Q00872 1141 aa13.77□□□□□ -0.2
PCDHGA11-201ENST00000398587 MVKQ03426 396 aa13.77□□□□□ -0.2
PCDHGA11-201ENST00000398587 RAPSNQ13702 412 aa13.77□□□□□ -0.2
PCDHGA11-201ENST00000398587 NPTX1Q15818 432 aa13.77□□□□□ -0.2
PCDHGA11-201ENST00000398587 CST9Q5W186 159 aa13.77□□□□□ -0.2
PCDHGA11-201ENST00000398587 FAM131AQ6UXB0 335 aa13.77□□□□□ -0.2
PCDHGA11-201ENST00000398587 CBARPQ8N350 705 aaPredicted RBP13.77□□□□□ -0.2
PCDHGA11-201ENST00000398587 OR56A1Q8NGH5 318 aa13.77□□□□□ -0.2
PCDHGA11-201ENST00000398587 MAPK15Q8TD08 544 aa13.77□□□□□ -0.2
PCDHGA11-201ENST00000398587 SORCS1Q8WY21 1168 aa13.77□□□□□ -0.2
PCDHGA11-201ENST00000398587 BADQ92934 168 aa13.77□□□□□ -0.2
PCDHGA11-201ENST00000398587 ART5Q96L15 291 aa13.77□□□□□ -0.2
PCDHGA11-201ENST00000398587 RDH12Q96NR8 316 aa13.77□□□□□ -0.2
PCDHGA11-201ENST00000398587 MRPL39Q9NYK5 338 aaKnown RBP13.77□□□□□ -0.2
PCDHGA11-201ENST00000398587 MYO5AQ9Y4I1 1855 aaKnown RBP13.77□□□□□ -0.2
PCDHGA11-201ENST00000398587 HEPACAM2A8MVW5 462 aa13.77□□□□□ -0.21
PCDHGA11-201ENST00000398587 HTRA2O43464 458 aaPredicted RBP13.77□□□□□ -0.21
PCDHGA11-201ENST00000398587 EEDO75530 441 aaKnown RBP13.77□□□□□ -0.21
PCDHGA11-201ENST00000398587 PRKAR1AP10644 381 aa13.77□□□□□ -0.21
PCDHGA11-201ENST00000398587 GSTM3P21266 225 aa13.77□□□□□ -0.21
PCDHGA11-201ENST00000398587 XKP51811 444 aa13.77□□□□□ -0.21
PCDHGA11-201ENST00000398587 POMZP3Q6PJE2 187 aa13.77□□□□□ -0.21
PCDHGA11-201ENST00000398587 KBTBD6Q86V97 674 aa13.77□□□□□ -0.21
PCDHGA11-201ENST00000398587 NRSN1Q8IZ57 195 aa13.77□□□□□ -0.21
PCDHGA11-201ENST00000398587 GOLM1Q8NBJ4 401 aa13.77□□□□□ -0.21
PCDHGA11-201ENST00000398587 OR4K1Q8NGD4 311 aa13.77□□□□□ -0.21
PCDHGA11-201ENST00000398587 AURKBQ96GD4 344 aaPredicted RBP13.77□□□□□ -0.21
PCDHGA11-201ENST00000398587 CLEC4MQ9H2X3 399 aaPredicted RBP13.77□□□□□ -0.21
PCDHGA11-201ENST00000398587 TRIM39Q9HCM9 518 aa13.77□□□□□ -0.21
PCDHGA11-201ENST00000398587 PTGDR2Q9Y5Y4 395 aa13.77□□□□□ -0.21
PCDHGA11-201ENST00000398587 PEX16Q9Y5Y5 336 aa13.77□□□□□ -0.21
PCDHGA11-201ENST00000398587 LTBP4Q8N2S1 1624 aa13.77□□□□□ -0.21
PCDHGA11-201ENST00000398587 LOC100130705A0A1B0GUX0 176 aa13.77□□□□□ -0.21
PCDHGA11-201ENST00000398587 LDB2O43679 373 aa13.77□□□□□ -0.21
PCDHGA11-201ENST00000398587 HCN1O60741 890 aa13.77□□□□□ -0.21
PCDHGA11-201ENST00000398587 RPLP0P05388 317 aaKnown RBP13.77□□□□□ -0.21
PCDHGA11-201ENST00000398587 PRSS56P0CW18 603 aa13.77□□□□□ -0.21
PCDHGA11-201ENST00000398587 ARSFP54793 590 aa13.77□□□□□ -0.21
PCDHGA11-201ENST00000398587 CDH15P55291 814 aa13.77□□□□□ -0.21
PCDHGA11-201ENST00000398587 ABRAXAS2Q15018 415 aa13.77□□□□□ -0.21
PCDHGA11-201ENST00000398587 XKR4Q5GH76 650 aa13.77□□□□□ -0.21
PCDHGA11-201ENST00000398587 FAM91A1Q658Y4 838 aa13.77□□□□□ -0.21
PCDHGA11-201ENST00000398587 CRTC1Q6UUV9 634 aa13.77□□□□□ -0.21
PCDHGA11-201ENST00000398587 TSPAN33Q86UF1 283 aa13.77□□□□□ -0.21
PCDHGA11-201ENST00000398587 SNX33Q8WV41 574 aa13.77□□□□□ -0.21
PCDHGA11-201ENST00000398587 TREX1Q9NSU2 369 aa13.77□□□□□ -0.21
PCDHGA11-201ENST00000398587 COPS7AQ9UBW8 275 aa13.77□□□□□ -0.21
PCDHGA11-201ENST00000398587 PCDHB3Q9Y5E6 796 aa13.77□□□□□ -0.21
PCDHGA11-201ENST00000398587 KLHL33A6NCF5 533 aa13.76□□□□□ -0.21
PCDHGA11-201ENST00000398587 H7BY64 318 aa13.76□□□□□ -0.21
PCDHGA11-201ENST00000398587 KAT7O95251 611 aa13.76□□□□□ -0.21
PCDHGA11-201ENST00000398587 RPS3P23396 243 aaKnown RBP eCLIP13.76□□□□□ -0.21
PCDHGA11-201ENST00000398587 TIA1P31483 386 aaKnown RBP eCLIP13.76□□□□□ -0.21
PCDHGA11-201ENST00000398587 TUBA4AP68366 448 aa13.76□□□□□ -0.21
PCDHGA11-201ENST00000398587 CYBRD1Q53TN4 286 aa13.76□□□□□ -0.21
PCDHGA11-201ENST00000398587 MPP7Q5T2T1 576 aa13.76□□□□□ -0.21
PCDHGA11-201ENST00000398587 PRAP1Q96NZ9 151 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms