RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 CD244Q9BZW8 370 aa15.48■□□□□ 0.07
CHMP1A-201ENST00000397901 IL17CQ9P0M4 197 aa15.48■□□□□ 0.07
CHMP1A-201ENST00000397901 TBC1D24Q9ULP9 559 aa15.48■□□□□ 0.07
CHMP1A-201ENST00000397901 OARD1Q9Y530 152 aa15.48■□□□□ 0.07
CHMP1A-201ENST00000397901 GMPPBQ9Y5P6 360 aa15.48■□□□□ 0.07
CHMP1A-201ENST00000397901 LYVE1Q9Y5Y7 322 aa15.48■□□□□ 0.07
CHMP1A-201ENST00000397901 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.48■□□□□ 0.07
CHMP1A-201ENST00000397901 MEIOCA2RUB1 952 aa15.48■□□□□ 0.07
CHMP1A-201ENST00000397901 H7C0S8 307 aa15.48■□□□□ 0.07
CHMP1A-201ENST00000397901 SCAMP3O14828 347 aaKnown RBP15.48■□□□□ 0.07
CHMP1A-201ENST00000397901 SLC11A2P49281 568 aa15.48■□□□□ 0.07
CHMP1A-201ENST00000397901 RGS4P49798 205 aa15.48■□□□□ 0.07
CHMP1A-201ENST00000397901 GZMMP51124 257 aa15.48■□□□□ 0.07
CHMP1A-201ENST00000397901 ARF5P84085 180 aa15.48■□□□□ 0.07
CHMP1A-201ENST00000397901 SLC14A1Q13336 389 aa15.48■□□□□ 0.07
CHMP1A-201ENST00000397901 ZNF177Q13360 481 aaPredicted RBP15.48■□□□□ 0.07
CHMP1A-201ENST00000397901 GBX1Q14549 363 aa15.48■□□□□ 0.07
CHMP1A-201ENST00000397901 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.48■□□□□ 0.07
CHMP1A-201ENST00000397901 KBTBD8Q8NFY9 601 aa15.48■□□□□ 0.07
CHMP1A-201ENST00000397901 ZFAND1Q8TCF1 268 aa15.48■□□□□ 0.07
CHMP1A-201ENST00000397901 FAM193BQ96PV7 902 aaPredicted RBP15.48■□□□□ 0.07
CHMP1A-201ENST00000397901 SERHLQ9NQF3 203 aa15.48■□□□□ 0.07
CHMP1A-201ENST00000397901 RASSF1Q9NS23 344 aa15.48■□□□□ 0.07
CHMP1A-201ENST00000397901 PCDHGB2Q9Y5G2 931 aa15.48■□□□□ 0.07
CHMP1A-201ENST00000397901 PCM1Q15154 2024 aa15.48■□□□□ 0.07
CHMP1A-201ENST00000397901 PDPK1O15530 556 aa15.47■□□□□ 0.07
CHMP1A-201ENST00000397901 CPNE3O75131 537 aaKnown RBP15.47■□□□□ 0.07
CHMP1A-201ENST00000397901 VNN2O95498 520 aa15.47■□□□□ 0.07
CHMP1A-201ENST00000397901 PRAMEF1O95521 474 aa15.47■□□□□ 0.07
CHMP1A-201ENST00000397901 EPHA2P29317 976 aa15.47■□□□□ 0.07
CHMP1A-201ENST00000397901 S100A3P33764 101 aa15.47■□□□□ 0.07
CHMP1A-201ENST00000397901 GPAT3Q53EU6 434 aa15.47■□□□□ 0.07
CHMP1A-201ENST00000397901 ATXN7L2Q5T6C5 722 aaPredicted RBP15.47■□□□□ 0.07
CHMP1A-201ENST00000397901 ZNF767PQ75MW2 155 aa15.47■□□□□ 0.07
CHMP1A-201ENST00000397901 ZNF551Q7Z340 670 aaPredicted RBP15.47■□□□□ 0.07
CHMP1A-201ENST00000397901 TMEM132CQ8N3T6 1108 aa15.47■□□□□ 0.07
CHMP1A-201ENST00000397901 UBE2FQ969M7 185 aa15.47■□□□□ 0.07
CHMP1A-201ENST00000397901 PYCR2Q96C36 320 aa15.47■□□□□ 0.07
CHMP1A-201ENST00000397901 SDHCQ99643 169 aaPredicted RBP15.47■□□□□ 0.07
CHMP1A-201ENST00000397901 GPR62Q9BZJ7 368 aa15.47■□□□□ 0.07
CHMP1A-201ENST00000397901 RANGRFQ9HD47 186 aaPredicted RBP15.47■□□□□ 0.07
CHMP1A-201ENST00000397901 PCDHB1Q9Y5F3 818 aa15.47■□□□□ 0.07
CHMP1A-201ENST00000397901 FAM20BO75063 409 aa15.46■□□□□ 0.07
CHMP1A-201ENST00000397901 ERN1O75460 977 aaKnown RBP15.46■□□□□ 0.07
CHMP1A-201ENST00000397901 LCKP06239 509 aa15.46■□□□□ 0.07
CHMP1A-201ENST00000397901 IRF1P10914 325 aa15.46■□□□□ 0.07
CHMP1A-201ENST00000397901 ERP29P30040 261 aaKnown RBP15.46■□□□□ 0.07
CHMP1A-201ENST00000397901 HNF4AP41235 474 aa15.46■□□□□ 0.07
CHMP1A-201ENST00000397901 IL12RB1P42701 662 aa15.46■□□□□ 0.07
CHMP1A-201ENST00000397901 CTSKP43235 329 aa15.46■□□□□ 0.07
CHMP1A-201ENST00000397901 RPS14P62263 151 aaKnown RBP15.46■□□□□ 0.07
CHMP1A-201ENST00000397901 ARHGEF7Q14155 803 aa15.46■□□□□ 0.07
CHMP1A-201ENST00000397901 FAM122CQ6P4D5 195 aa15.46■□□□□ 0.07
CHMP1A-201ENST00000397901 DOK6Q6PKX4 331 aa15.46■□□□□ 0.07
CHMP1A-201ENST00000397901 TRIM46Q7Z4K8 759 aa15.46■□□□□ 0.07
CHMP1A-201ENST00000397901 PLPP6Q8IY26 295 aa15.46■□□□□ 0.07
CHMP1A-201ENST00000397901 OR6K2Q8NGY2 324 aa15.46■□□□□ 0.07
CHMP1A-201ENST00000397901 FCGR1BQ92637 280 aa15.46■□□□□ 0.07
CHMP1A-201ENST00000397901 NEDD4LQ96PU5 975 aa15.46■□□□□ 0.07
CHMP1A-201ENST00000397901 OR2A14Q96R47 310 aa15.46■□□□□ 0.07
CHMP1A-201ENST00000397901 ACPTQ9BZG2 426 aa15.46■□□□□ 0.07
CHMP1A-201ENST00000397901 ROGDIQ9GZN7 287 aa15.46■□□□□ 0.07
CHMP1A-201ENST00000397901 LATS2Q9NRM7 1088 aa15.46■□□□□ 0.07
CHMP1A-201ENST00000397901 GKN1Q9NS71 199 aa15.46■□□□□ 0.07
CHMP1A-201ENST00000397901 GPRC5BQ9NZH0 403 aa15.46■□□□□ 0.07
CHMP1A-201ENST00000397901 RNF6Q9Y252 685 aa15.46■□□□□ 0.07
CHMP1A-201ENST00000397901 POLHQ9Y253 713 aa15.46■□□□□ 0.07
CHMP1A-201ENST00000397901 TRAPPC4Q9Y296 219 aa15.46■□□□□ 0.07
CHMP1A-201ENST00000397901 VWA8A3KMH1 1905 aa15.46■□□□□ 0.07
CHMP1A-201ENST00000397901 NUP214P35658 2090 aaPredicted RBP15.46■□□□□ 0.07
CHMP1A-201ENST00000397901 MEN1O00255 615 aa15.46■□□□□ 0.07
CHMP1A-201ENST00000397901 CLDN11O75508 207 aa15.46■□□□□ 0.07
CHMP1A-201ENST00000397901 ARHGEF15O94989 841 aa15.46■□□□□ 0.07
CHMP1A-201ENST00000397901 ZNF7P17097 686 aaPredicted RBP15.46■□□□□ 0.07
CHMP1A-201ENST00000397901 TACR1P25103 407 aa15.46■□□□□ 0.07
CHMP1A-201ENST00000397901 ATP5C1P36542 298 aaKnown RBP15.46■□□□□ 0.07
CHMP1A-201ENST00000397901 PPP3CCP48454 512 aa15.46■□□□□ 0.07
CHMP1A-201ENST00000397901 SLC9A3P48764 834 aa15.46■□□□□ 0.07
CHMP1A-201ENST00000397901 CCDC190Q86UF4 302 aa15.46■□□□□ 0.07
CHMP1A-201ENST00000397901 PLCZ1Q86YW0 608 aa15.46■□□□□ 0.07
CHMP1A-201ENST00000397901 LIX1LQ8IVB5 337 aa15.46■□□□□ 0.07
CHMP1A-201ENST00000397901 ACAT2Q9BWD1 397 aa15.46■□□□□ 0.07
CHMP1A-201ENST00000397901 KCNH6Q9H252 994 aa15.46■□□□□ 0.07
CHMP1A-201ENST00000397901 TNKS2Q9H2K2 1166 aa15.46■□□□□ 0.07
CHMP1A-201ENST00000397901 ASB8Q9H765 288 aa15.46■□□□□ 0.07
CHMP1A-201ENST00000397901 C14orf119Q9NWQ9 140 aa15.46■□□□□ 0.07
CHMP1A-201ENST00000397901 MAT2BQ9NZL9 334 aa15.46■□□□□ 0.07
CHMP1A-201ENST00000397901 SRRDQ9UH36 339 aa15.46■□□□□ 0.07
CHMP1A-201ENST00000397901 A0A096LPI6 279 aa15.45■□□□□ 0.06
CHMP1A-201ENST00000397901 CD160O95971 181 aa15.45■□□□□ 0.06
CHMP1A-201ENST00000397901 KLKB1P03952 638 aa15.45■□□□□ 0.06
CHMP1A-201ENST00000397901 EPB42P16452 691 aa15.45■□□□□ 0.06
CHMP1A-201ENST00000397901 LIPAP38571 399 aa15.45■□□□□ 0.06
CHMP1A-201ENST00000397901 OR2T5Q6IEZ7 315 aa15.45■□□□□ 0.06
CHMP1A-201ENST00000397901 NCEH1Q6PIU2 408 aa15.45■□□□□ 0.06
CHMP1A-201ENST00000397901 XKRXQ6PP77 449 aa15.45■□□□□ 0.06
CHMP1A-201ENST00000397901 KCTD20Q7Z5Y7 419 aa15.45■□□□□ 0.06
CHMP1A-201ENST00000397901 CARNMT1Q8N4J0 409 aa15.45■□□□□ 0.06
CHMP1A-201ENST00000397901 TTC29Q8NA56 475 aaPredicted RBP15.45■□□□□ 0.06
CHMP1A-201ENST00000397901 OR2T29Q8NH02 315 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms