RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 ST13P5Q8NFI4 369 aaPredicted RBP23.22■■□□□ 1.31
CSNK1E-203ENST00000396832 CITED4Q96RK1 184 aa23.22■■□□□ 1.31
CSNK1E-203ENST00000396832 FAM126AQ9BYI3 521 aaPredicted RBP23.22■■□□□ 1.31
CSNK1E-203ENST00000396832 MAGEH1Q9H213 219 aa23.22■■□□□ 1.31
CSNK1E-203ENST00000396832 ASB8Q9H765 288 aa23.22■■□□□ 1.31
CSNK1E-203ENST00000396832 AASDHPPTQ9NRN7 309 aa23.22■■□□□ 1.31
CSNK1E-203ENST00000396832 PLCXD1Q9NUJ7 323 aa23.22■■□□□ 1.31
CSNK1E-203ENST00000396832 FAM8A1Q9UBU6 413 aa23.22■■□□□ 1.31
CSNK1E-203ENST00000396832 MUTYHQ9UIF7 546 aa23.22■■□□□ 1.31
CSNK1E-203ENST00000396832 RIMKLBQ9ULI2 386 aa23.22■■□□□ 1.31
CSNK1E-203ENST00000396832 MICAL3Q7RTP6 2002 aa23.21■■□□□ 1.31
CSNK1E-203ENST00000396832 M0R129 80 aa23.21■■□□□ 1.31
CSNK1E-203ENST00000396832 ACSL4O60488 711 aa23.21■■□□□ 1.31
CSNK1E-203ENST00000396832 DUSP7Q16829 419 aa23.21■■□□□ 1.31
CSNK1E-203ENST00000396832 FAM214AQ32MH5 1076 aa23.21■■□□□ 1.31
CSNK1E-203ENST00000396832 USP39Q53GS9 565 aaKnown RBP23.21■■□□□ 1.31
CSNK1E-203ENST00000396832 ALG1LQ6GMV1 187 aa23.21■■□□□ 1.31
CSNK1E-203ENST00000396832 STX19Q8N4C7 294 aa23.21■■□□□ 1.31
CSNK1E-203ENST00000396832 WBP2Q969T9 261 aa23.21■■□□□ 1.31
CSNK1E-203ENST00000396832 IFNA8P32881 189 aa23.21■■□□□ 1.31
CSNK1E-203ENST00000396832 RPS14P62263 151 aaKnown RBP23.21■■□□□ 1.31
CSNK1E-203ENST00000396832 ARF5P84085 180 aa23.21■■□□□ 1.31
CSNK1E-203ENST00000396832 ANGPTL6Q8NI99 470 aa23.21■■□□□ 1.31
CSNK1E-203ENST00000396832 BEX2Q9BXY8 128 aa23.21■■□□□ 1.31
CSNK1E-203ENST00000396832 MMP28Q9H239 520 aa23.21■■□□□ 1.31
CSNK1E-203ENST00000396832 CFL2Q9Y281 166 aa23.21■■□□□ 1.31
CSNK1E-203ENST00000396832 PLXNA3P51805 1871 aa23.2■■□□□ 1.31
CSNK1E-203ENST00000396832 OAZ2O95190 189 aa23.2■■□□□ 1.3
CSNK1E-203ENST00000396832 COL6A1P12109 1028 aa23.2■■□□□ 1.3
CSNK1E-203ENST00000396832 AKR1A1P14550 325 aa23.2■■□□□ 1.3
CSNK1E-203ENST00000396832 GATMP50440 423 aa23.2■■□□□ 1.3
CSNK1E-203ENST00000396832 ZMAT1Q5H9K5 638 aa23.2■■□□□ 1.3
CSNK1E-203ENST00000396832 ERAP2Q6P179 960 aa23.2■■□□□ 1.3
CSNK1E-203ENST00000396832 SELENOMQ8WWX9 145 aa23.2■■□□□ 1.3
CSNK1E-203ENST00000396832 APOLD1Q96LR9 279 aa23.2■■□□□ 1.3
CSNK1E-203ENST00000396832 COL21A1Q96P44 957 aa23.2■■□□□ 1.3
CSNK1E-203ENST00000396832 CD244Q9BZW8 370 aa23.2■■□□□ 1.3
CSNK1E-203ENST00000396832 NUFIP1Q9UHK0 495 aaKnown RBP23.2■■□□□ 1.3
CSNK1E-203ENST00000396832 E9PQ18 207 aa23.2■■□□□ 1.3
CSNK1E-203ENST00000396832 SLC28A1O00337 649 aa23.2■■□□□ 1.3
CSNK1E-203ENST00000396832 RFXANKO14593 260 aa23.2■■□□□ 1.3
CSNK1E-203ENST00000396832 RGS5O15539 181 aa23.2■■□□□ 1.3
CSNK1E-203ENST00000396832 KLKB1P03952 638 aa23.2■■□□□ 1.3
CSNK1E-203ENST00000396832 HTR2BP41595 481 aa23.2■■□□□ 1.3
CSNK1E-203ENST00000396832 DSC3Q14574 896 aa23.2■■□□□ 1.3
CSNK1E-203ENST00000396832 INO80DQ53TQ3 878 aaPredicted RBP23.2■■□□□ 1.3
CSNK1E-203ENST00000396832 FKBP14Q9NWM8 211 aa23.2■■□□□ 1.3
CSNK1E-203ENST00000396832 KLK4Q9Y5K2 254 aa23.2■■□□□ 1.3
CSNK1E-203ENST00000396832 H3BNC9 293 aa23.19■■□□□ 1.3
CSNK1E-203ENST00000396832 KDELR3O43731 214 aa23.19■■□□□ 1.3
CSNK1E-203ENST00000396832 PDE12Q6L8Q7 609 aaKnown RBP23.19■■□□□ 1.3
CSNK1E-203ENST00000396832 ZSWIM9Q86XI8 627 aa23.19■■□□□ 1.3
CSNK1E-203ENST00000396832 DNAJB8Q8NHS0 232 aa23.19■■□□□ 1.3
CSNK1E-203ENST00000396832 FUBP3Q96I24 572 aaKnown RBP eCLIP23.19■■□□□ 1.37e-7■■■□□ 17.7
CSNK1E-203ENST00000396832 UROC1Q96N76 676 aa23.19■■□□□ 1.3
CSNK1E-203ENST00000396832 FAM193BQ96PV7 902 aaPredicted RBP23.19■■□□□ 1.3
CSNK1E-203ENST00000396832 RAD18Q9NS91 495 aa23.19■■□□□ 1.3
CSNK1E-203ENST00000396832 OLA1Q9NTK5 396 aaKnown RBP23.19■■□□□ 1.3
CSNK1E-203ENST00000396832 KLHL20Q9Y2M5 609 aa23.19■■□□□ 1.3
CSNK1E-203ENST00000396832 SCN10AQ9Y5Y9 1956 aa23.19■■□□□ 1.3
CSNK1E-203ENST00000396832 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP23.19■■□□□ 1.3
CSNK1E-203ENST00000396832 A0A0G2JMP0 313 aa23.19■■□□□ 1.3
CSNK1E-203ENST00000396832 F11P03951 625 aa23.19■■□□□ 1.3
CSNK1E-203ENST00000396832 EPB42P16452 691 aa23.19■■□□□ 1.3
CSNK1E-203ENST00000396832 PTPN6P29350 595 aa23.19■■□□□ 1.3
CSNK1E-203ENST00000396832 ZNF177Q13360 481 aaPredicted RBP23.19■■□□□ 1.3
CSNK1E-203ENST00000396832 BAK1Q16611 211 aa23.19■■□□□ 1.3
CSNK1E-203ENST00000396832 RTN4RL1Q86UN2 441 aaPredicted RBP23.19■■□□□ 1.3
CSNK1E-203ENST00000396832 SLC38A6Q8IZM9 456 aa23.19■■□□□ 1.3
CSNK1E-203ENST00000396832 SLC7A6Q92536 515 aa23.19■■□□□ 1.3
CSNK1E-203ENST00000396832 HSH2DQ96JZ2 352 aa23.19■■□□□ 1.3
CSNK1E-203ENST00000396832 MCCC1Q96RQ3 725 aaPredicted RBP23.19■■□□□ 1.3
CSNK1E-203ENST00000396832 RAD9AQ99638 391 aa23.19■■□□□ 1.3
CSNK1E-203ENST00000396832 ACOXLQ9NUZ1 547 aa23.19■■□□□ 1.3
CSNK1E-203ENST00000396832 IL17CQ9P0M4 197 aa23.19■■□□□ 1.3
CSNK1E-203ENST00000396832 MTMR11A4FU01 709 aa23.18■■□□□ 1.3
CSNK1E-203ENST00000396832 CPSF4O95639 269 aaKnown RBP23.18■■□□□ 1.3
CSNK1E-203ENST00000396832 SEMG1P04279 462 aa23.18■■□□□ 1.3
CSNK1E-203ENST00000396832 CLCN4P51793 760 aa23.18■■□□□ 1.3
CSNK1E-203ENST00000396832 CACNG1Q06432 222 aa23.18■■□□□ 1.3
CSNK1E-203ENST00000396832 ST3GAL4Q11206 333 aa23.18■■□□□ 1.3
CSNK1E-203ENST00000396832 MLIPQ5VWP3 458 aa23.18■■□□□ 1.3
CSNK1E-203ENST00000396832 APIPQ96GX9 242 aa23.18■■□□□ 1.3
CSNK1E-203ENST00000396832 SLC45A1Q9Y2W3 748 aa23.18■■□□□ 1.3
CSNK1E-203ENST00000396832 BNIP3LO60238 219 aa23.18■■□□□ 1.3
CSNK1E-203ENST00000396832 IL7P13232 177 aa23.18■■□□□ 1.3
CSNK1E-203ENST00000396832 RPL17P18621 184 aaKnown RBP23.18■■□□□ 1.3
CSNK1E-203ENST00000396832 TNFRSF1BP20333 461 aa23.18■■□□□ 1.3
CSNK1E-203ENST00000396832 GPAT3Q53EU6 434 aa23.18■■□□□ 1.3
CSNK1E-203ENST00000396832 GABARAPL3Q9BY60 117 aa23.18■■□□□ 1.3
CSNK1E-203ENST00000396832 DYRK4Q9NR20 520 aa23.18■■□□□ 1.3
CSNK1E-203ENST00000396832 TOR4AQ9NXH8 423 aa23.18■■□□□ 1.3
CSNK1E-203ENST00000396832 TAS2R16Q9NYV7 291 aa23.18■■□□□ 1.3
CSNK1E-203ENST00000396832 RPS6KA6Q9UK32 745 aa23.18■■□□□ 1.3
CSNK1E-203ENST00000396832 MAN2B2Q9Y2E5 1009 aa23.18■■□□□ 1.3
CSNK1E-203ENST00000396832 GFRA2O00451 464 aa23.18■■□□□ 1.3
CSNK1E-203ENST00000396832 AOC2O75106 756 aa23.18■■□□□ 1.3
CSNK1E-203ENST00000396832 C9P02748 559 aa23.18■■□□□ 1.3
CSNK1E-203ENST00000396832 TRAPPC2P0DI81 140 aa23.18■■□□□ 1.3
CSNK1E-203ENST00000396832 TRAPPC2BP0DI82 140 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms