RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 CMTM6Q9NX76 183 aa8.18□□□□□ -1.1
NDE1-202ENST00000396355 FBXL2Q9UKC9 423 aa8.18□□□□□ -1.1
NDE1-202ENST00000396355 USP18Q9UMW8 372 aa8.18□□□□□ -1.1
NDE1-202ENST00000396355 MAPRE3Q9UPY8 281 aa8.18□□□□□ -1.1
NDE1-202ENST00000396355 SLC35F4A4IF30 521 aa8.18□□□□□ -1.1
NDE1-202ENST00000396355 RHPN2P1A8MT19 583 aa8.18□□□□□ -1.1
NDE1-202ENST00000396355 H3BN98 237 aa8.18□□□□□ -1.1
NDE1-202ENST00000396355 LINC01387J3KSC0 135 aa8.18□□□□□ -1.1
NDE1-202ENST00000396355 CILPO75339 1184 aa8.18□□□□□ -1.1
NDE1-202ENST00000396355 FARS2O95363 451 aaKnown RBP8.18□□□□□ -1.1
NDE1-202ENST00000396355 CRHBPP24387 322 aa8.18□□□□□ -1.1
NDE1-202ENST00000396355 LCN1P31025 176 aa8.18□□□□□ -1.1
NDE1-202ENST00000396355 DDOSTP39656 456 aa8.18□□□□□ -1.1
NDE1-202ENST00000396355 GSK3BP49841 420 aa8.18□□□□□ -1.1
NDE1-202ENST00000396355 SCNN1GP51170 649 aa8.18□□□□□ -1.1
NDE1-202ENST00000396355 EEF1A1P68104 462 aaKnown RBP8.18□□□□□ -1.1
NDE1-202ENST00000396355 EEF1A2Q05639 463 aaKnown RBP8.18□□□□□ -1.1
NDE1-202ENST00000396355 RAB33AQ14088 237 aa8.18□□□□□ -1.1
NDE1-202ENST00000396355 ATXN7L3Q14CW9 347 aaPredicted RBP8.18□□□□□ -1.1
NDE1-202ENST00000396355 EEF1A1P5Q5VTE0 462 aa8.18□□□□□ -1.1
NDE1-202ENST00000396355 PRAMEF13Q5VWM6 474 aa8.18□□□□□ -1.1
NDE1-202ENST00000396355 IER5Q5VY09 327 aa8.18□□□□□ -1.1
NDE1-202ENST00000396355 CREB3L2Q70SY1 520 aa8.18□□□□□ -1.1
NDE1-202ENST00000396355 SLC47A1Q96FL8 570 aa8.18□□□□□ -1.1
NDE1-202ENST00000396355 C1orf74Q96LT6 269 aa8.18□□□□□ -1.1
NDE1-202ENST00000396355 ZSWIM3Q96MP5 696 aa8.18□□□□□ -1.1
NDE1-202ENST00000396355 SUCNR1Q9BXA5 334 aa8.18□□□□□ -1.1
NDE1-202ENST00000396355 ASPNQ9BXN1 380 aa8.18□□□□□ -1.1
NDE1-202ENST00000396355 ATXN3LQ9H3M9 355 aa8.18□□□□□ -1.1
NDE1-202ENST00000396355 ZNF334Q9HCZ1 680 aaPredicted RBP8.18□□□□□ -1.1
NDE1-202ENST00000396355 CCNB1IP1Q9NPC3 277 aa8.18□□□□□ -1.1
NDE1-202ENST00000396355 DUS2Q9NX74 493 aaKnown RBP8.18□□□□□ -1.1
NDE1-202ENST00000396355 TEX264Q9Y6I9 313 aa8.18□□□□□ -1.1
NDE1-202ENST00000396355 HTTP42858 3142 aa8.18□□□□□ -1.1
NDE1-202ENST00000396355 PRMT5O14744 637 aaPredicted RBP8.18□□□□□ -1.1
NDE1-202ENST00000396355 DUSP11O75319 330 aaKnown RBP8.18□□□□□ -1.1
NDE1-202ENST00000396355 CNMDO75829 334 aa8.18□□□□□ -1.1
NDE1-202ENST00000396355 ENDOD1O94919 500 aa8.18□□□□□ -1.1
NDE1-202ENST00000396355 SPDEFO95238 335 aa8.18□□□□□ -1.1
NDE1-202ENST00000396355 TRUB2O95900 331 aaKnown RBP8.18□□□□□ -1.1
NDE1-202ENST00000396355 ITGA3P26006 1051 aa8.18□□□□□ -1.1
NDE1-202ENST00000396355 AQP1P29972 269 aa8.18□□□□□ -1.1
NDE1-202ENST00000396355 GKP32189 559 aa8.18□□□□□ -1.1
NDE1-202ENST00000396355 TNFSF8P32971 234 aa8.18□□□□□ -1.1
NDE1-202ENST00000396355 PBX2P40425 430 aa8.18□□□□□ -1.1
NDE1-202ENST00000396355 PTPN11Q06124 597 aaPredicted RBP8.18□□□□□ -1.1
NDE1-202ENST00000396355 ELP6Q0PNE2 266 aa8.18□□□□□ -1.1
NDE1-202ENST00000396355 HSPA14Q0VDF9 509 aa8.18□□□□□ -1.1
NDE1-202ENST00000396355 GPR19Q15760 415 aa8.18□□□□□ -1.1
NDE1-202ENST00000396355 PSMD5Q16401 504 aa8.18□□□□□ -1.1
NDE1-202ENST00000396355 ZNF574Q6ZN55 896 aaPredicted RBP8.18□□□□□ -1.1
NDE1-202ENST00000396355 VN1R5Q7Z5H4 357 aa8.18□□□□□ -1.1
NDE1-202ENST00000396355 FBXO16Q8IX29 292 aaPredicted RBP8.18□□□□□ -1.1
NDE1-202ENST00000396355 EFHBQ8N7U6 833 aa8.18□□□□□ -1.1
NDE1-202ENST00000396355 ANKFN1Q8N957 763 aa8.18□□□□□ -1.1
NDE1-202ENST00000396355 C12orf29Q8N999 325 aa8.18□□□□□ -1.1
NDE1-202ENST00000396355 COLGALT1Q8NBJ5 622 aa8.18□□□□□ -1.1
NDE1-202ENST00000396355 TRPV1Q8NER1 839 aa8.18□□□□□ -1.1
NDE1-202ENST00000396355 ZFAND1Q8TCF1 268 aa8.18□□□□□ -1.1
NDE1-202ENST00000396355 GTPBP3Q969Y2 492 aaKnown RBP8.18□□□□□ -1.1
NDE1-202ENST00000396355 ZNF641Q96N77 438 aaPredicted RBP8.18□□□□□ -1.1
NDE1-202ENST00000396355 MAGEB5Q9BZ81 275 aa8.18□□□□□ -1.1
NDE1-202ENST00000396355 CCM2LQ9NUG4 571 aaPredicted RBP8.18□□□□□ -1.1
NDE1-202ENST00000396355 INTS10Q9NVR2 710 aaKnown RBP8.18□□□□□ -1.1
NDE1-202ENST00000396355 ZNF490Q9ULM2 529 aaPredicted RBP8.18□□□□□ -1.1
NDE1-202ENST00000396355 NME7Q9Y5B8 376 aa8.18□□□□□ -1.1
NDE1-202ENST00000396355 ALG5Q9Y673 324 aa8.18□□□□□ -1.1
NDE1-202ENST00000396355 LACTBL1A8MY62 500 aa8.17□□□□□ -1.1
NDE1-202ENST00000396355 ACKR2O00590 384 aa8.17□□□□□ -1.1
NDE1-202ENST00000396355 TIMP1P01033 207 aa8.17□□□□□ -1.1
NDE1-202ENST00000396355 CYP11A1P05108 521 aa8.17□□□□□ -1.1
NDE1-202ENST00000396355 PFKMP08237 780 aa8.17□□□□□ -1.1
NDE1-202ENST00000396355 DHRS4L1P0CG22 281 aa8.17□□□□□ -1.1
NDE1-202ENST00000396355 ANXA3P12429 323 aa8.17□□□□□ -1.1
NDE1-202ENST00000396355 PTPN6P29350 595 aa8.17□□□□□ -1.1
NDE1-202ENST00000396355 DPP6P42658 865 aa8.17□□□□□ -1.1
NDE1-202ENST00000396355 CTBP1Q13363 440 aa8.17□□□□□ -1.1
NDE1-202ENST00000396355 TUSC1Q2TAM9 212 aa8.17□□□□□ -1.1
NDE1-202ENST00000396355 SPANXN3Q5MJ09 141 aa8.17□□□□□ -1.1
NDE1-202ENST00000396355 EFCAB12Q6NXP0 572 aa8.17□□□□□ -1.1
NDE1-202ENST00000396355 ANKS3Q6ZW76 656 aa8.17□□□□□ -1.1
NDE1-202ENST00000396355 SZRD1Q7Z422 152 aa8.17□□□□□ -1.1
NDE1-202ENST00000396355 ANKRD52Q8NB46 1076 aa8.17□□□□□ -1.1
NDE1-202ENST00000396355 AVL9Q8NBF6 648 aa8.17□□□□□ -1.1
NDE1-202ENST00000396355 OR6J1Q8NGC5 347 aa8.17□□□□□ -1.1
NDE1-202ENST00000396355 MAFIPQ8WZ33 124 aa8.17□□□□□ -1.1
NDE1-202ENST00000396355 ELMOD3Q96FG2 381 aa8.17□□□□□ -1.1
NDE1-202ENST00000396355 RBBP8Q99708 897 aa8.17□□□□□ -1.1
NDE1-202ENST00000396355 JAM3Q9BX67 310 aa8.17□□□□□ -1.1
NDE1-202ENST00000396355 BCL2L14Q9BZR8 327 aa8.17□□□□□ -1.1
NDE1-202ENST00000396355 LRRC4Q9HBW1 653 aa8.17□□□□□ -1.1
NDE1-202ENST00000396355 SEMA4BQ9NPR2 832 aaPredicted RBP8.17□□□□□ -1.1
NDE1-202ENST00000396355 CASS4Q9NQ75 786 aa8.17□□□□□ -1.1
NDE1-202ENST00000396355 SDHAF2Q9NX18 166 aa8.17□□□□□ -1.1
NDE1-202ENST00000396355 STAP1Q9ULZ2 295 aa8.17□□□□□ -1.1
NDE1-202ENST00000396355 ASF1AQ9Y294 204 aa8.17□□□□□ -1.1
NDE1-202ENST00000396355 HES2Q9Y543 173 aa8.17□□□□□ -1.1
NDE1-202ENST00000396355 LAMA3Q16787 3333 aa8.17□□□□□ -1.1
NDE1-202ENST00000396355 LOC100509620A0A075B734 347 aa8.17□□□□□ -1.1
NDE1-202ENST00000396355 A0A1B0GV90 55 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms