RNA–Protein interactions for RNA: ENST00000396268.7

CCHCR1-203, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,958 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-203ENST00000396268 TRPM5Q9NZQ8 1165 aa13.59□□□□□ -0.23
CCHCR1-203ENST00000396268 TAF4O00268 1085 aa13.59□□□□□ -0.23
CCHCR1-203ENST00000396268 CLIC1O00299 241 aa13.59□□□□□ -0.23
CCHCR1-203ENST00000396268 SMAD6O43541 496 aaKnown RBP13.59□□□□□ -0.23
CCHCR1-203ENST00000396268 CCNKO75909 580 aa13.59□□□□□ -0.23
CCHCR1-203ENST00000396268 PRPS2P11908 318 aa13.59□□□□□ -0.23
CCHCR1-203ENST00000396268 ENGP17813 658 aa13.59□□□□□ -0.23
CCHCR1-203ENST00000396268 HNF1BP35680 557 aa13.59□□□□□ -0.23
CCHCR1-203ENST00000396268 MAGEA2P43356 314 aa13.59□□□□□ -0.23
CCHCR1-203ENST00000396268 CYP4F8P98187 520 aa13.59□□□□□ -0.23
CCHCR1-203ENST00000396268 SYT6Q5T7P8 510 aaPredicted RBP13.59□□□□□ -0.23
CCHCR1-203ENST00000396268 FAM109BQ6ICB4 259 aaPredicted RBP13.59□□□□□ -0.23
CCHCR1-203ENST00000396268 CAPN13Q6MZZ7 669 aaPredicted RBP13.59□□□□□ -0.23
CCHCR1-203ENST00000396268 LYSMD2Q8IV50 215 aa13.59□□□□□ -0.23
CCHCR1-203ENST00000396268 PLPP6Q8IY26 295 aa13.59□□□□□ -0.23
CCHCR1-203ENST00000396268 DYNC2LI1Q8TCX1 351 aa13.59□□□□□ -0.23
CCHCR1-203ENST00000396268 FBLIM1Q8WUP2 373 aa13.59□□□□□ -0.23
CCHCR1-203ENST00000396268 DHRS1Q96LJ7 313 aa13.59□□□□□ -0.23
CCHCR1-203ENST00000396268 SLC29A3Q9BZD2 475 aa13.59□□□□□ -0.23
CCHCR1-203ENST00000396268 ZBP1Q9H171 429 aa13.59□□□□□ -0.23
CCHCR1-203ENST00000396268 THG1LQ9NWX6 298 aaKnown RBP13.59□□□□□ -0.23
CCHCR1-203ENST00000396268 ASIC5Q9NY37 505 aa13.59□□□□□ -0.23
CCHCR1-203ENST00000396268 TBC1D14Q9P2M4 693 aa13.59□□□□□ -0.23
CCHCR1-203ENST00000396268 SNX6Q9UNH7 406 aa13.59□□□□□ -0.23
CCHCR1-203ENST00000396268 MAN2B2Q9Y2E5 1009 aa13.59□□□□□ -0.23
CCHCR1-203ENST00000396268 PABPN1LA6NDY0 278 aaKnown RBP13.59□□□□□ -0.23
CCHCR1-203ENST00000396268 FPGTO14772 594 aa13.59□□□□□ -0.23
CCHCR1-203ENST00000396268 FPR1P21462 350 aa13.59□□□□□ -0.23
CCHCR1-203ENST00000396268 PTPN6P29350 595 aa13.59□□□□□ -0.23
CCHCR1-203ENST00000396268 KRT20P35900 424 aa13.59□□□□□ -0.23
CCHCR1-203ENST00000396268 KEAP1Q14145 624 aa13.59□□□□□ -0.23
CCHCR1-203ENST00000396268 INO80DQ53TQ3 878 aaPredicted RBP13.59□□□□□ -0.23
CCHCR1-203ENST00000396268 UBE2R2Q712K3 238 aaPredicted RBP13.59□□□□□ -0.23
CCHCR1-203ENST00000396268 HSH2DQ96JZ2 352 aa13.59□□□□□ -0.23
CCHCR1-203ENST00000396268 RETREG1Q9H6L5 497 aa13.59□□□□□ -0.23
CCHCR1-203ENST00000396268 REEP1Q9H902 201 aa13.59□□□□□ -0.23
CCHCR1-203ENST00000396268 IFT52Q9Y366 437 aa13.59□□□□□ -0.23
CCHCR1-203ENST00000396268 UGT2A1Q9Y4X1 527 aa13.59□□□□□ -0.23
CCHCR1-203ENST00000396268 CXCL14O95715 111 aa13.58□□□□□ -0.24
CCHCR1-203ENST00000396268 TRBC1P01850 177 aa13.58□□□□□ -0.24
CCHCR1-203ENST00000396268 JUNDP17535 347 aa13.58□□□□□ -0.24
CCHCR1-203ENST00000396268 IL1RNP18510 177 aa13.58□□□□□ -0.24
CCHCR1-203ENST00000396268 EPORP19235 508 aa13.58□□□□□ -0.24
CCHCR1-203ENST00000396268 ITPKAP23677 461 aa13.58□□□□□ -0.24
CCHCR1-203ENST00000396268 AQP1P29972 269 aa13.58□□□□□ -0.24
CCHCR1-203ENST00000396268 DDX39BQ13838 428 aaKnown RBP13.58□□□□□ -0.24
CCHCR1-203ENST00000396268 MAD2L1BPQ15013 274 aaPredicted RBP13.58□□□□□ -0.24
CCHCR1-203ENST00000396268 PDE12Q6L8Q7 609 aaKnown RBP13.58□□□□□ -0.24
CCHCR1-203ENST00000396268 TSPAN33Q86UF1 283 aa13.58□□□□□ -0.24
CCHCR1-203ENST00000396268 P3H2Q8IVL5 708 aa13.58□□□□□ -0.24
CCHCR1-203ENST00000396268 ARL14EPQ8N8R7 260 aaPredicted RBP13.58□□□□□ -0.24
CCHCR1-203ENST00000396268 WFDC5Q8TCV5 224 aa13.58□□□□□ -0.24
CCHCR1-203ENST00000396268 NELL1Q92832 810 aa13.58□□□□□ -0.24
CCHCR1-203ENST00000396268 SMG9Q9H0W8 520 aaKnown RBP13.58□□□□□ -0.24
CCHCR1-203ENST00000396268 RUBCNLQ9H714 662 aa13.58□□□□□ -0.24
CCHCR1-203ENST00000396268 C14orf119Q9NWQ9 140 aa13.58□□□□□ -0.24
CCHCR1-203ENST00000396268 EFCAB9A8MZ26 197 aa13.58□□□□□ -0.24
CCHCR1-203ENST00000396268 AP3D1O14617 1153 aa13.58□□□□□ -0.24
CCHCR1-203ENST00000396268 SH3BGRLO75368 114 aa13.58□□□□□ -0.24
CCHCR1-203ENST00000396268 EPN2O95208 641 aa13.58□□□□□ -0.24
CCHCR1-203ENST00000396268 KDELR2P33947 212 aa13.58□□□□□ -0.24
CCHCR1-203ENST00000396268 CYP4F2P78329 520 aa13.58□□□□□ -0.24
CCHCR1-203ENST00000396268 HTRA4P83105 476 aaPredicted RBP13.58□□□□□ -0.24
CCHCR1-203ENST00000396268 VMACQ2NL98 169 aa13.58□□□□□ -0.24
CCHCR1-203ENST00000396268 SMUG1Q53HV7 270 aa13.58□□□□□ -0.24
CCHCR1-203ENST00000396268 KIAA1614Q5VZ46 1190 aa13.58□□□□□ -0.24
CCHCR1-203ENST00000396268 PLPP4Q5VZY2 271 aa13.58□□□□□ -0.24
CCHCR1-203ENST00000396268 TPGS2Q68CL5 300 aa13.58□□□□□ -0.24
CCHCR1-203ENST00000396268 GPR153Q6NV75 609 aa13.58□□□□□ -0.24
CCHCR1-203ENST00000396268 SYT12Q8IV01 421 aa13.58□□□□□ -0.24
CCHCR1-203ENST00000396268 SIX5Q8N196 739 aa13.58□□□□□ -0.24
CCHCR1-203ENST00000396268 UBTD2Q8WUN7 234 aa13.58□□□□□ -0.24
CCHCR1-203ENST00000396268 CLIP3Q96DZ5 547 aa13.58□□□□□ -0.24
CCHCR1-203ENST00000396268 BCL7BQ9BQE9 202 aa13.58□□□□□ -0.24
CCHCR1-203ENST00000396268 HTATIP2Q9BUP3 242 aa13.58□□□□□ -0.24
CCHCR1-203ENST00000396268 DCSTAMPQ9H295 470 aa13.58□□□□□ -0.24
CCHCR1-203ENST00000396268 FBXO8Q9NRD0 319 aa13.58□□□□□ -0.24
CCHCR1-203ENST00000396268 HCFC1R1Q9NWW0 138 aa13.58□□□□□ -0.24
CCHCR1-203ENST00000396268 THUMPD1Q9NXG2 353 aaKnown RBP13.58□□□□□ -0.24
CCHCR1-203ENST00000396268 FAM8A1Q9UBU6 413 aa13.58□□□□□ -0.24
CCHCR1-203ENST00000396268 RPS6KA6Q9UK32 745 aa13.58□□□□□ -0.24
CCHCR1-203ENST00000396268 MYO9BQ13459 2157 aa13.58□□□□□ -0.24
CCHCR1-203ENST00000396268 NOTOA8MTQ0 251 aa13.57□□□□□ -0.24
CCHCR1-203ENST00000396268 NUAK1O60285 661 aa13.57□□□□□ -0.24
CCHCR1-203ENST00000396268 HIST1H2AGP0C0S8 130 aaPredicted RBP13.57□□□□□ -0.24
CCHCR1-203ENST00000396268 HIST1H2ADP20671 130 aa13.57□□□□□ -0.24
CCHCR1-203ENST00000396268 MAPK1P28482 360 aa13.57□□□□□ -0.24
CCHCR1-203ENST00000396268 HOXA9P31269 272 aa13.57□□□□□ -0.24
CCHCR1-203ENST00000396268 RPP38P78345 283 aaKnown RBP13.57□□□□□ -0.24
CCHCR1-203ENST00000396268 MRPS15P82914 257 aaKnown RBP13.57□□□□□ -0.24
CCHCR1-203ENST00000396268 CREMQ03060 361 aa13.57□□□□□ -0.24
CCHCR1-203ENST00000396268 TP53BP2Q13625 1128 aa13.57□□□□□ -0.24
CCHCR1-203ENST00000396268 PTCHD3Q3KNS1 767 aa13.57□□□□□ -0.24
CCHCR1-203ENST00000396268 GAREM2Q75VX8 874 aa13.57□□□□□ -0.24
CCHCR1-203ENST00000396268 MMAAQ8IVH4 418 aaKnown RBP13.57□□□□□ -0.24
CCHCR1-203ENST00000396268 NXPE1Q8N323 547 aa13.57□□□□□ -0.24
CCHCR1-203ENST00000396268 RHOXF1Q8NHV9 184 aa13.57□□□□□ -0.24
CCHCR1-203ENST00000396268 ASIC4Q96FT7 647 aa13.57□□□□□ -0.24
CCHCR1-203ENST00000396268 HIST1H2AHQ96KK5 128 aa13.57□□□□□ -0.24
CCHCR1-203ENST00000396268 HIST1H2AJQ99878 128 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms