RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 SLCO2A1Q92959 643 aa12.8□□□□□ -0.36
VCPKMT-201ENST00000395859 DNAJC1Q96KC8 554 aaKnown RBP12.8□□□□□ -0.36
VCPKMT-201ENST00000395859 PIP5K1AQ99755 562 aa12.8□□□□□ -0.36
VCPKMT-201ENST00000395859 PLCD4Q9BRC7 762 aa12.8□□□□□ -0.36
VCPKMT-201ENST00000395859 FSD1LQ9BXM9 530 aa12.8□□□□□ -0.36
VCPKMT-201ENST00000395859 SAE1Q9UBE0 346 aaPredicted RBP12.8□□□□□ -0.36
VCPKMT-201ENST00000395859 A0A1B0GVC2 190 aa12.79□□□□□ -0.36
VCPKMT-201ENST00000395859 FEZF1A0PJY2 475 aa12.79□□□□□ -0.36
VCPKMT-201ENST00000395859 LRRD1A4D1F6 860 aa12.79□□□□□ -0.36
VCPKMT-201ENST00000395859 FIGNL2A6NMB9 653 aa12.79□□□□□ -0.36
VCPKMT-201ENST00000395859 KLRC4-KLRK1H3BQV0 150 aa12.79□□□□□ -0.36
VCPKMT-201ENST00000395859 QSOX1O00391 747 aa12.79□□□□□ -0.36
VCPKMT-201ENST00000395859 NDC80O14777 642 aa12.79□□□□□ -0.36
VCPKMT-201ENST00000395859 P2RX6O15547 441 aa12.79□□□□□ -0.36
VCPKMT-201ENST00000395859 PHF2O75151 1096 aa12.79□□□□□ -0.36
VCPKMT-201ENST00000395859 CRTAMO95727 393 aa12.79□□□□□ -0.36
VCPKMT-201ENST00000395859 IGHG3P01860 377 aa12.79□□□□□ -0.36
VCPKMT-201ENST00000395859 HRGP04196 525 aa12.79□□□□□ -0.36
VCPKMT-201ENST00000395859 ZFXP17010 805 aaPredicted RBP12.79□□□□□ -0.36
VCPKMT-201ENST00000395859 TACR1P25103 407 aa12.79□□□□□ -0.36
VCPKMT-201ENST00000395859 PSMA3P25788 255 aa12.79□□□□□ -0.36
VCPKMT-201ENST00000395859 UQCRC1P31930 480 aa12.79□□□□□ -0.36
VCPKMT-201ENST00000395859 UBASH3AP57075 661 aa12.79□□□□□ -0.36
VCPKMT-201ENST00000395859 SLC26A5P58743 744 aa12.79□□□□□ -0.36
VCPKMT-201ENST00000395859 KLHL30Q0D2K2 578 aa12.79□□□□□ -0.36
VCPKMT-201ENST00000395859 PTK6Q13882 451 aa12.79□□□□□ -0.36
VCPKMT-201ENST00000395859 ITIH4Q14624 930 aa12.79□□□□□ -0.36
VCPKMT-201ENST00000395859 POMZP3Q6PJE2 187 aa12.79□□□□□ -0.36
VCPKMT-201ENST00000395859 KIF2BQ8N4N8 673 aa12.79□□□□□ -0.36
VCPKMT-201ENST00000395859 OR5M9Q8NGP3 310 aa12.79□□□□□ -0.36
VCPKMT-201ENST00000395859 TFB1MQ8WVM0 346 aaKnown RBP12.79□□□□□ -0.36
VCPKMT-201ENST00000395859 ZNF592Q92610 1267 aa12.79□□□□□ -0.36
VCPKMT-201ENST00000395859 RNASE6Q93091 150 aaKnown RBP12.79□□□□□ -0.36
VCPKMT-201ENST00000395859 VAT1Q99536 393 aa12.79□□□□□ -0.36
VCPKMT-201ENST00000395859 RAB11FIP5Q9BXF6 653 aa12.79□□□□□ -0.36
VCPKMT-201ENST00000395859 DEFB127Q9H1M4 99 aa12.79□□□□□ -0.36
VCPKMT-201ENST00000395859 DEPPQ9NTK1 212 aa12.79□□□□□ -0.36
VCPKMT-201ENST00000395859 SMARCAL1Q9NZC9 954 aa12.79□□□□□ -0.36
VCPKMT-201ENST00000395859 KLHL8Q9P2G9 620 aaPredicted RBP12.79□□□□□ -0.36
VCPKMT-201ENST00000395859 B4GALT7Q9UBV7 327 aa12.79□□□□□ -0.36
VCPKMT-201ENST00000395859 ARHGAP21Q5T5U3 1957 aa12.79□□□□□ -0.36
VCPKMT-201ENST00000395859 KRT87PA6NCN2 255 aa12.78□□□□□ -0.36
VCPKMT-201ENST00000395859 H0YIG0 161 aa12.78□□□□□ -0.36
VCPKMT-201ENST00000395859 BCKDKO14874 412 aa12.78□□□□□ -0.36
VCPKMT-201ENST00000395859 PECAM1P16284 738 aaPredicted RBP12.78□□□□□ -0.36
VCPKMT-201ENST00000395859 CCR7P32248 378 aa12.78□□□□□ -0.36
VCPKMT-201ENST00000395859 NR2C2P49116 596 aa12.78□□□□□ -0.36
VCPKMT-201ENST00000395859 RHAGQ02094 409 aa12.78□□□□□ -0.36
VCPKMT-201ENST00000395859 CCSMST1Q4G0I0 132 aa12.78□□□□□ -0.36
VCPKMT-201ENST00000395859 SFT2D3Q587I9 215 aa12.78□□□□□ -0.36
VCPKMT-201ENST00000395859 RIPPLY2Q5TAB7 128 aa12.78□□□□□ -0.36
VCPKMT-201ENST00000395859 KAZNQ674X7 775 aa12.78□□□□□ -0.36
VCPKMT-201ENST00000395859 HMBOX1Q6NT76 420 aa12.78□□□□□ -0.36
VCPKMT-201ENST00000395859 SEM1Q6ZVN7 128 aa12.78□□□□□ -0.36
VCPKMT-201ENST00000395859 PID1Q7Z2X4 250 aa12.78□□□□□ -0.36
VCPKMT-201ENST00000395859 WDR53Q7Z5U6 358 aaPredicted RBP12.78□□□□□ -0.36
VCPKMT-201ENST00000395859 VWA5B2Q8N398 1253 aa12.78□□□□□ -0.36
VCPKMT-201ENST00000395859 PLPP5Q8NEB5 264 aa12.78□□□□□ -0.36
VCPKMT-201ENST00000395859 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.78□□□□□ -0.36
VCPKMT-201ENST00000395859 TMEM125Q96AQ2 219 aa12.78□□□□□ -0.36
VCPKMT-201ENST00000395859 APOL2Q9BQE5 337 aa12.78□□□□□ -0.36
VCPKMT-201ENST00000395859 DPH7Q9BTV6 452 aa12.78□□□□□ -0.36
VCPKMT-201ENST00000395859 ARNT2Q9HBZ2 717 aa12.78□□□□□ -0.36
VCPKMT-201ENST00000395859 RTN4Q9NQC3 1192 aaKnown RBP12.78□□□□□ -0.36
VCPKMT-201ENST00000395859 NENFQ9UMX5 172 aa12.78□□□□□ -0.36
VCPKMT-201ENST00000395859 A0A1B0GTH6 734 aa12.77□□□□□ -0.37
VCPKMT-201ENST00000395859 PINLYPA6NC86 204 aa12.77□□□□□ -0.37
VCPKMT-201ENST00000395859 CLCA1A8K7I4 914 aa12.77□□□□□ -0.37
VCPKMT-201ENST00000395859 NSA2O95478 260 aaKnown RBP12.77□□□□□ -0.37
VCPKMT-201ENST00000395859 RPN2P04844 631 aa12.77□□□□□ -0.37
VCPKMT-201ENST00000395859 ASCL1P50553 236 aa12.77□□□□□ -0.37
VCPKMT-201ENST00000395859 TAS2R50P59544 299 aa12.77□□□□□ -0.37
VCPKMT-201ENST00000395859 RELAQ04206 551 aa12.77□□□□□ -0.37
VCPKMT-201ENST00000395859 TRIM14Q14142 442 aa12.77□□□□□ -0.37
VCPKMT-201ENST00000395859 MINDY4Q4G0A6 757 aa12.77□□□□□ -0.37
VCPKMT-201ENST00000395859 SYTL3Q4VX76 610 aa12.77□□□□□ -0.37
VCPKMT-201ENST00000395859 ZNF425Q6IV72 752 aa12.77□□□□□ -0.37
VCPKMT-201ENST00000395859 TAS2R42Q7RTR8 314 aa12.77□□□□□ -0.37
VCPKMT-201ENST00000395859 MDGA2Q7Z553 956 aa12.77□□□□□ -0.37
VCPKMT-201ENST00000395859 OR9A4Q8NGU2 314 aa12.77□□□□□ -0.37
VCPKMT-201ENST00000395859 OR51Q1Q8NH59 317 aa12.77□□□□□ -0.37
VCPKMT-201ENST00000395859 CREB3L4Q8TEY5 395 aa12.77□□□□□ -0.37
VCPKMT-201ENST00000395859 CDKN2AIPNLQ96HQ2 116 aa12.77□□□□□ -0.37
VCPKMT-201ENST00000395859 LPAR4Q99677 370 aa12.77□□□□□ -0.37
VCPKMT-201ENST00000395859 GBA3Q9H227 469 aa12.77□□□□□ -0.37
VCPKMT-201ENST00000395859 NLE1Q9NVX2 485 aaPredicted RBP12.77□□□□□ -0.37
VCPKMT-201ENST00000395859 SLC39A10Q9ULF5 831 aa12.77□□□□□ -0.37
VCPKMT-201ENST00000395859 ZKSCAN5Q9Y2L8 839 aa12.77□□□□□ -0.37
VCPKMT-201ENST00000395859 LIPGQ9Y5X9 500 aa12.77□□□□□ -0.37
VCPKMT-201ENST00000395859 ABCA1O95477 2261 aa12.77□□□□□ -0.37
VCPKMT-201ENST00000395859 HAX1O00165 279 aa12.76□□□□□ -0.37
VCPKMT-201ENST00000395859 WDR1O75083 606 aa12.76□□□□□ -0.37
VCPKMT-201ENST00000395859 GLSO94925 669 aaPredicted RBP12.76□□□□□ -0.37
VCPKMT-201ENST00000395859 MSNP26038 577 aaKnown RBP12.76□□□□□ -0.37
VCPKMT-201ENST00000395859 XCR1P46094 333 aa12.76□□□□□ -0.37
VCPKMT-201ENST00000395859 GEMP55040 296 aa12.76□□□□□ -0.37
VCPKMT-201ENST00000395859 CSE1LP55060 971 aaKnown RBP12.76□□□□□ -0.37
VCPKMT-201ENST00000395859 GPR85P60893 370 aa12.76□□□□□ -0.37
VCPKMT-201ENST00000395859 DYNLT1P63172 113 aa12.76□□□□□ -0.37
VCPKMT-201ENST00000395859 MPP1Q00013 466 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms