RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 HSMCR30P0CW71 290 aa15.33■□□□□ 0.04
SMARCD1-202ENST00000394963 ETFAP13804 333 aa15.33■□□□□ 0.04
SMARCD1-202ENST00000394963 PRPS1L1P21108 318 aa15.33■□□□□ 0.04
SMARCD1-202ENST00000394963 HSPA13P48723 471 aa15.33■□□□□ 0.04
SMARCD1-202ENST00000394963 UBE3AQ05086 875 aa15.33■□□□□ 0.04
SMARCD1-202ENST00000394963 UBXN2BQ14CS0 331 aa15.33■□□□□ 0.04
SMARCD1-202ENST00000394963 LIN52Q52LA3 116 aa15.33■□□□□ 0.04
SMARCD1-202ENST00000394963 MFSD4BQ5TF39 518 aa15.33■□□□□ 0.04
SMARCD1-202ENST00000394963 C1orf53Q5VUE5 145 aa15.33■□□□□ 0.04
SMARCD1-202ENST00000394963 MTSS1LQ765P7 747 aa15.33■□□□□ 0.04
SMARCD1-202ENST00000394963 ARMCX6Q7L4S7 300 aa15.33■□□□□ 0.04
SMARCD1-202ENST00000394963 TRIM73Q86UV7 250 aa15.33■□□□□ 0.04
SMARCD1-202ENST00000394963 GTF2H4Q92759 462 aa15.33■□□□□ 0.04
SMARCD1-202ENST00000394963 REPS1Q96D71 796 aa15.33■□□□□ 0.04
SMARCD1-202ENST00000394963 LMLNQ96KR4 655 aa15.33■□□□□ 0.04
SMARCD1-202ENST00000394963 AIF1LQ9BQI0 150 aa15.33■□□□□ 0.04
SMARCD1-202ENST00000394963 TRPS1Q9UHF7 1281 aa15.33■□□□□ 0.04
SMARCD1-202ENST00000394963 IRAK3Q9Y616 596 aa15.33■□□□□ 0.04
SMARCD1-202ENST00000394963 PPM1DO15297 605 aa15.32■□□□□ 0.04
SMARCD1-202ENST00000394963 ERI3O43414 337 aaKnown RBP15.32■□□□□ 0.04
SMARCD1-202ENST00000394963 PRKRAO75569 313 aaKnown RBP15.32■□□□□ 0.04
SMARCD1-202ENST00000394963 SRPRAP08240 638 aaKnown RBP15.32■□□□□ 0.04
SMARCD1-202ENST00000394963 IL3P08700 152 aa15.32■□□□□ 0.04
SMARCD1-202ENST00000394963 GSTM1P09488 218 aa15.32■□□□□ 0.04
SMARCD1-202ENST00000394963 FEN1P39748 380 aaKnown RBP15.32■□□□□ 0.04
SMARCD1-202ENST00000394963 GRIA2P42262 883 aa15.32■□□□□ 0.04
SMARCD1-202ENST00000394963 C16orf72Q14CZ0 275 aa15.32■□□□□ 0.04
SMARCD1-202ENST00000394963 ADGRG6Q86SQ4 1221 aa15.32■□□□□ 0.04
SMARCD1-202ENST00000394963 LSRQ86X29 649 aaPredicted RBP15.32■□□□□ 0.04
SMARCD1-202ENST00000394963 PHOSPHO2Q8TCD6 241 aa15.32■□□□□ 0.04
SMARCD1-202ENST00000394963 ABTB1Q969K4 478 aaPredicted RBP15.32■□□□□ 0.04
SMARCD1-202ENST00000394963 ECHDC3Q96DC8 303 aa15.32■□□□□ 0.04
SMARCD1-202ENST00000394963 NR1H4Q96RI1 486 aaPredicted RBP15.32■□□□□ 0.04
SMARCD1-202ENST00000394963 OSBPL11Q9BXB4 747 aa15.32■□□□□ 0.04
SMARCD1-202ENST00000394963 REEP1Q9H902 201 aa15.32■□□□□ 0.04
SMARCD1-202ENST00000394963 SH2B3Q9UQQ2 575 aa15.32■□□□□ 0.04
SMARCD1-202ENST00000394963 ANKRD36A6QL64 1941 aa15.32■□□□□ 0.04
SMARCD1-202ENST00000394963 EPOPA6NHQ4 379 aa15.32■□□□□ 0.04
SMARCD1-202ENST00000394963 ITGB7P26010 798 aa15.32■□□□□ 0.04
SMARCD1-202ENST00000394963 ELK4P28324 431 aa15.32■□□□□ 0.04
SMARCD1-202ENST00000394963 DEF8Q6ZN54 512 aa15.32■□□□□ 0.04
SMARCD1-202ENST00000394963 RBCK1Q9BYM8 510 aa15.32■□□□□ 0.04
SMARCD1-202ENST00000394963 CD93Q9NPY3 652 aa15.32■□□□□ 0.04
SMARCD1-202ENST00000394963 SMPD3Q9NY59 655 aaPredicted RBP15.32■□□□□ 0.04
SMARCD1-202ENST00000394963 AHSPQ9NZD4 102 aa15.32■□□□□ 0.04
SMARCD1-202ENST00000394963 TDRD6O60522 2096 aaKnown RBP15.32■□□□□ 0.04
SMARCD1-202ENST00000394963 NDUFS4O43181 175 aa15.32■□□□□ 0.04
SMARCD1-202ENST00000394963 FOXD2O60548 495 aaPredicted RBP15.32■□□□□ 0.04
SMARCD1-202ENST00000394963 MERTKQ12866 999 aa15.32■□□□□ 0.04
SMARCD1-202ENST00000394963 NADK2Q4G0N4 442 aa15.32■□□□□ 0.04
SMARCD1-202ENST00000394963 OGFOD2Q6N063 350 aa15.32■□□□□ 0.04
SMARCD1-202ENST00000394963 GPR153Q6NV75 609 aa15.32■□□□□ 0.04
SMARCD1-202ENST00000394963 COMMD6Q7Z4G1 85 aa15.32■□□□□ 0.04
SMARCD1-202ENST00000394963 P3H2Q8IVL5 708 aa15.32■□□□□ 0.04
SMARCD1-202ENST00000394963 PDLIM5Q96HC4 596 aaKnown RBP15.32■□□□□ 0.04
SMARCD1-202ENST00000394963 SLC35A5Q9BS91 424 aa15.32■□□□□ 0.04
SMARCD1-202ENST00000394963 SMOXQ9NWM0 555 aa15.32■□□□□ 0.04
SMARCD1-202ENST00000394963 PIPSLA2A3N6 862 aa15.31■□□□□ 0.04
SMARCD1-202ENST00000394963 M0QX08 132 aa15.31■□□□□ 0.04
SMARCD1-202ENST00000394963 RNGTTO60942 597 aaKnown RBP15.31■□□□□ 0.04
SMARCD1-202ENST00000394963 MATN4O95460 622 aa15.31■□□□□ 0.04
SMARCD1-202ENST00000394963 C1orf105O95561 183 aa15.31■□□□□ 0.04
SMARCD1-202ENST00000394963 RPN2P04844 631 aa15.31■□□□□ 0.04
SMARCD1-202ENST00000394963 JAK1P23458 1154 aa15.31■□□□□ 0.04
SMARCD1-202ENST00000394963 MAOBP27338 520 aa15.31■□□□□ 0.04
SMARCD1-202ENST00000394963 HTR1BP28222 390 aa15.31■□□□□ 0.04
SMARCD1-202ENST00000394963 CDK3Q00526 305 aa15.31■□□□□ 0.04
SMARCD1-202ENST00000394963 TRAP1Q12931 704 aaKnown RBP15.31■□□□□ 0.04
SMARCD1-202ENST00000394963 OGFRL1Q5TC84 451 aaPredicted RBP15.31■□□□□ 0.04
SMARCD1-202ENST00000394963 GTPBP3Q969Y2 492 aaKnown RBP15.31■□□□□ 0.04
SMARCD1-202ENST00000394963 FAM129BQ96TA1 746 aa15.31■□□□□ 0.04
SMARCD1-202ENST00000394963 NLNQ9BYT8 704 aa15.31■□□□□ 0.04
SMARCD1-202ENST00000394963 FBXL21Q9UKT6 434 aa15.31■□□□□ 0.04
SMARCD1-202ENST00000394963 A0A1W2PRB8 838 aa15.31■□□□□ 0.04
SMARCD1-202ENST00000394963 ASPDHA6ND91 283 aa15.31■□□□□ 0.04
SMARCD1-202ENST00000394963 H3BSA7 217 aa15.31■□□□□ 0.04
SMARCD1-202ENST00000394963 ALDH6A1Q02252 535 aaKnown RBP15.31■□□□□ 0.04
SMARCD1-202ENST00000394963 GSTM4Q03013 218 aa15.31■□□□□ 0.04
SMARCD1-202ENST00000394963 ZNF776Q68DI1 518 aaPredicted RBP15.31■□□□□ 0.04
SMARCD1-202ENST00000394963 ANKRD54Q6NXT1 300 aa15.31■□□□□ 0.04
SMARCD1-202ENST00000394963 WDR53Q7Z5U6 358 aaPredicted RBP15.31■□□□□ 0.04
SMARCD1-202ENST00000394963 GPR141Q7Z602 305 aa15.31■□□□□ 0.04
SMARCD1-202ENST00000394963 PROSER1Q86XN7 944 aa15.31■□□□□ 0.04
SMARCD1-202ENST00000394963 RNF130Q86XS8 419 aa15.31■□□□□ 0.04
SMARCD1-202ENST00000394963 ADHFE1Q8IWW8 467 aa15.31■□□□□ 0.04
SMARCD1-202ENST00000394963 OR4N5Q8IXE1 308 aa15.31■□□□□ 0.04
SMARCD1-202ENST00000394963 TMIGD2Q96BF3 282 aa15.31■□□□□ 0.04
SMARCD1-202ENST00000394963 SLC17A9Q9BYT1 436 aa15.31■□□□□ 0.04
SMARCD1-202ENST00000394963 CCM2LQ9NUG4 571 aaPredicted RBP15.31■□□□□ 0.04
SMARCD1-202ENST00000394963 CYP8B1Q9UNU6 501 aa15.31■□□□□ 0.04
SMARCD1-202ENST00000394963 EP300Q09472 2414 aaPredicted RBP15.31■□□□□ 0.04
SMARCD1-202ENST00000394963 POM121BA6NF01 834 aa15.31■□□□□ 0.04
SMARCD1-202ENST00000394963 AQP12BA6NM10 295 aa15.31■□□□□ 0.04
SMARCD1-202ENST00000394963 H3BN98 237 aa15.31■□□□□ 0.04
SMARCD1-202ENST00000394963 SUV39H1O43463 412 aa15.31■□□□□ 0.04
SMARCD1-202ENST00000394963 MITFO75030 526 aaPredicted RBP15.31■□□□□ 0.04
SMARCD1-202ENST00000394963 GPIP06744 558 aa15.31■□□□□ 0.04
SMARCD1-202ENST00000394963 KELP23276 732 aa15.31■□□□□ 0.04
SMARCD1-202ENST00000394963 EEFSECP57772 596 aaKnown RBP15.31■□□□□ 0.04
SMARCD1-202ENST00000394963 SPIBQ01892 262 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms