RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 SHFQ7M4L6 423 aa12.8□□□□□ -0.36
NFKB1-202ENST00000394820 TSPAN33Q86UF1 283 aa12.8□□□□□ -0.36
NFKB1-202ENST00000394820 TRAPPC5Q8IUR0 188 aa12.8□□□□□ -0.36
NFKB1-202ENST00000394820 TIGD4Q8IY51 512 aa12.8□□□□□ -0.36
NFKB1-202ENST00000394820 GTF2H4Q92759 462 aa12.8□□□□□ -0.36
NFKB1-202ENST00000394820 MAGEH1Q9H213 219 aa12.8□□□□□ -0.36
NFKB1-202ENST00000394820 SP140LQ9H930 580 aa12.8□□□□□ -0.36
NFKB1-202ENST00000394820 NUDT4Q9NZJ9 180 aa12.8□□□□□ -0.36
NFKB1-202ENST00000394820 LOC285095A0A1B0GVY8 99 aa12.8□□□□□ -0.36
NFKB1-202ENST00000394820 ILVBLA1L0T0 632 aa12.8□□□□□ -0.36
NFKB1-202ENST00000394820 MROH6A6NGR9 719 aa12.8□□□□□ -0.36
NFKB1-202ENST00000394820 STC2O76061 302 aa12.8□□□□□ -0.36
NFKB1-202ENST00000394820 MATN4O95460 622 aa12.8□□□□□ -0.36
NFKB1-202ENST00000394820 ESR1P03372 595 aa12.8□□□□□ -0.36
NFKB1-202ENST00000394820 FGF4P08620 206 aa12.8□□□□□ -0.36
NFKB1-202ENST00000394820 CSKP41240 450 aa12.8□□□□□ -0.36
NFKB1-202ENST00000394820 PTGER3P43115 390 aa12.8□□□□□ -0.36
NFKB1-202ENST00000394820 MAPKAPK2P49137 400 aa12.8□□□□□ -0.36
NFKB1-202ENST00000394820 NPRL3Q12980 569 aa12.8□□□□□ -0.36
NFKB1-202ENST00000394820 ATP13A5Q4VNC0 1218 aa12.8□□□□□ -0.36
NFKB1-202ENST00000394820 KIAA1614Q5VZ46 1190 aa12.8□□□□□ -0.36
NFKB1-202ENST00000394820 NPAS4Q8IUM7 802 aa12.8□□□□□ -0.36
NFKB1-202ENST00000394820 ZNF675Q8TD23 568 aa12.8□□□□□ -0.36
NFKB1-202ENST00000394820 CASD1Q96PB1 797 aa12.8□□□□□ -0.36
NFKB1-202ENST00000394820 ARNT2Q9HBZ2 717 aa12.8□□□□□ -0.36
NFKB1-202ENST00000394820 ZNF624Q9P2J8 865 aaPredicted RBP12.8□□□□□ -0.36
NFKB1-202ENST00000394820 NUFIP1Q9UHK0 495 aaKnown RBP12.8□□□□□ -0.36
NFKB1-202ENST00000394820 ZNF225Q9UK10 706 aa12.8□□□□□ -0.36
NFKB1-202ENST00000394820 F5P12259 2224 aa12.8□□□□□ -0.36
NFKB1-202ENST00000394820 FAM240BA0A1B0GVZ2 78 aa12.8□□□□□ -0.36
NFKB1-202ENST00000394820 ZNF840PA6NDX5 716 aa12.8□□□□□ -0.36
NFKB1-202ENST00000394820 CLDN11O75508 207 aa12.8□□□□□ -0.36
NFKB1-202ENST00000394820 DNAJA1P31689 397 aaKnown RBP12.8□□□□□ -0.36
NFKB1-202ENST00000394820 SOX3P41225 446 aa12.8□□□□□ -0.36
NFKB1-202ENST00000394820 ATP4BP51164 291 aa12.8□□□□□ -0.36
NFKB1-202ENST00000394820 CDH4P55283 916 aa12.8□□□□□ -0.36
NFKB1-202ENST00000394820 CBLBQ13191 982 aa12.8□□□□□ -0.36
NFKB1-202ENST00000394820 TUBA3CQ13748 450 aa12.8□□□□□ -0.36
NFKB1-202ENST00000394820 C1DQ13901 141 aaKnown RBP12.8□□□□□ -0.36
NFKB1-202ENST00000394820 PLEKHG6Q3KR16 790 aa12.8□□□□□ -0.36
NFKB1-202ENST00000394820 C5orf22Q49AR2 442 aa12.8□□□□□ -0.36
NFKB1-202ENST00000394820 PLET1Q6UQ28 207 aa12.8□□□□□ -0.36
NFKB1-202ENST00000394820 RFLNAQ6ZTI6 216 aa12.8□□□□□ -0.36
NFKB1-202ENST00000394820 BCDIN3DQ7Z5W3 292 aaKnown RBP12.8□□□□□ -0.36
NFKB1-202ENST00000394820 AADATQ8N5Z0 425 aa12.8□□□□□ -0.36
NFKB1-202ENST00000394820 CAPNS2Q96L46 248 aa12.8□□□□□ -0.36
NFKB1-202ENST00000394820 MCMBPQ9BTE3 642 aa12.8□□□□□ -0.36
NFKB1-202ENST00000394820 YTHDF1Q9BYJ9 559 aaKnown RBP12.8□□□□□ -0.36
NFKB1-202ENST00000394820 TRIT1Q9H3H1 467 aaKnown RBP12.8□□□□□ -0.36
NFKB1-202ENST00000394820 MUC13Q9H3R2 512 aa12.8□□□□□ -0.36
NFKB1-202ENST00000394820 BRD9Q9H8M2 597 aa12.8□□□□□ -0.36
NFKB1-202ENST00000394820 ZNF222Q9UK12 451 aa12.8□□□□□ -0.36
NFKB1-202ENST00000394820 FAM155AB1AL88 458 aaPredicted RBP12.79□□□□□ -0.36
NFKB1-202ENST00000394820 ERAL1O75616 437 aaKnown RBP12.79□□□□□ -0.36
NFKB1-202ENST00000394820 ACPPP15309 386 aa12.79□□□□□ -0.36
NFKB1-202ENST00000394820 KDELR2P33947 212 aa12.79□□□□□ -0.36
NFKB1-202ENST00000394820 LIPAP38571 399 aa12.79□□□□□ -0.36
NFKB1-202ENST00000394820 PREPP48147 710 aa12.79□□□□□ -0.36
NFKB1-202ENST00000394820 UGT8Q16880 541 aa12.79□□□□□ -0.36
NFKB1-202ENST00000394820 LIPKQ5VXJ0 399 aa12.79□□□□□ -0.36
NFKB1-202ENST00000394820 AFMIDQ63HM1 303 aa12.79□□□□□ -0.36
NFKB1-202ENST00000394820 SLC5A8Q8N695 610 aa12.79□□□□□ -0.36
NFKB1-202ENST00000394820 CELF5Q8N6W0 485 aaKnown RBP12.79□□□□□ -0.36
NFKB1-202ENST00000394820 PHOX2BQ99453 314 aa12.79□□□□□ -0.36
NFKB1-202ENST00000394820 TBX5Q99593 518 aa12.79□□□□□ -0.36
NFKB1-202ENST00000394820 CENPOQ9BU64 300 aa12.79□□□□□ -0.36
NFKB1-202ENST00000394820 OR51B5Q9H339 312 aa12.79□□□□□ -0.36
NFKB1-202ENST00000394820 CLN6Q9NWW5 311 aa12.79□□□□□ -0.36
NFKB1-202ENST00000394820 CEP290O15078 2479 aa12.79□□□□□ -0.36
NFKB1-202ENST00000394820 TRAV19A0A0A6YYK7 116 aa12.79□□□□□ -0.36
NFKB1-202ENST00000394820 SSX4O60224 188 aa12.79□□□□□ -0.36
NFKB1-202ENST00000394820 SEC14L2O76054 403 aa12.79□□□□□ -0.36
NFKB1-202ENST00000394820 CAV3P56539 151 aa12.79□□□□□ -0.36
NFKB1-202ENST00000394820 FOXM1Q08050 763 aa12.79□□□□□ -0.36
NFKB1-202ENST00000394820 C2orf80Q0P641 193 aa12.79□□□□□ -0.36
NFKB1-202ENST00000394820 ELAVL2Q12926 359 aaKnown RBP12.79□□□□□ -0.36
NFKB1-202ENST00000394820 EIF4EBP2Q13542 120 aaPredicted RBP12.79□□□□□ -0.36
NFKB1-202ENST00000394820 NCF4Q15080 339 aa12.79□□□□□ -0.36
NFKB1-202ENST00000394820 RETSATQ6NUM9 610 aa12.79□□□□□ -0.36
NFKB1-202ENST00000394820 BEND5Q7L4P6 421 aa12.79□□□□□ -0.36
NFKB1-202ENST00000394820 LKAAEAR1Q8TD35 194 aa12.79□□□□□ -0.36
NFKB1-202ENST00000394820 POF1BQ8WVV4 589 aa12.79□□□□□ -0.36
NFKB1-202ENST00000394820 COL26A1Q96A83 441 aa12.79□□□□□ -0.36
NFKB1-202ENST00000394820 FOPNLQ96NB1 174 aa12.79□□□□□ -0.36
NFKB1-202ENST00000394820 RNF208Q9H0X6 261 aa12.79□□□□□ -0.36
NFKB1-202ENST00000394820 EQTNQ9NQ60 294 aa12.79□□□□□ -0.36
NFKB1-202ENST00000394820 VNN3Q9NY84 501 aa12.79□□□□□ -0.36
NFKB1-202ENST00000394820 PRSS21Q9Y6M0 314 aa12.79□□□□□ -0.36
NFKB1-202ENST00000394820 MEN1O00255 615 aa12.78□□□□□ -0.36
NFKB1-202ENST00000394820 E2F3O00716 465 aa12.78□□□□□ -0.36
NFKB1-202ENST00000394820 CASKO14936 926 aa12.78□□□□□ -0.36
NFKB1-202ENST00000394820 SMAD6O43541 496 aaKnown RBP12.78□□□□□ -0.36
NFKB1-202ENST00000394820 GUCY1B2O75343 617 aa12.78□□□□□ -0.36
NFKB1-202ENST00000394820 CDRT1O95170 752 aa12.78□□□□□ -0.36
NFKB1-202ENST00000394820 OR56A5P0C7T3 313 aa12.78□□□□□ -0.36
NFKB1-202ENST00000394820 LAMP1P11279 417 aa12.78□□□□□ -0.36
NFKB1-202ENST00000394820 ETFAP13804 333 aa12.78□□□□□ -0.36
NFKB1-202ENST00000394820 MAGEA11P43364 429 aa12.78□□□□□ -0.36
NFKB1-202ENST00000394820 PPP5CP53041 499 aa12.78□□□□□ -0.36
NFKB1-202ENST00000394820 HSPB3Q12988 150 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms