RNA–Protein interactions for RNA: ENST00000394801.8

UBE2D3-207, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,368 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-207ENST00000394801 ZNF555Q8NEP9 628 aa14.78□□□□□ -0.04
UBE2D3-207ENST00000394801 OR9A1PQ8NGU1 263 aa14.78□□□□□ -0.04
UBE2D3-207ENST00000394801 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.78□□□□□ -0.043e-14■□□□□ 11.2
UBE2D3-207ENST00000394801 GAB3Q8WWW8 586 aa14.78□□□□□ -0.04
UBE2D3-207ENST00000394801 HDAC2Q92769 488 aaKnown RBP14.78□□□□□ -0.04
UBE2D3-207ENST00000394801 CXorf40BQ96DE9 158 aa14.78□□□□□ -0.04
UBE2D3-207ENST00000394801 ING2Q9H160 280 aa14.78□□□□□ -0.04
UBE2D3-207ENST00000394801 DPEP2Q9H4A9 486 aa14.78□□□□□ -0.04
UBE2D3-207ENST00000394801 CXorf21Q9HAI6 301 aa14.78□□□□□ -0.04
UBE2D3-207ENST00000394801 TPT1P8Q9HAU6 139 aa14.78□□□□□ -0.04
UBE2D3-207ENST00000394801 RPS6KA6Q9UK32 745 aa14.78□□□□□ -0.04
UBE2D3-207ENST00000394801 PCDHGA8Q9Y5G5 932 aa14.78□□□□□ -0.04
UBE2D3-207ENST00000394801 MUC22E2RYF6 1773 aaPredicted RBP14.78□□□□□ -0.04
UBE2D3-207ENST00000394801 C1orf226A1L170 272 aa14.78□□□□□ -0.04
UBE2D3-207ENST00000394801 OTOL1A6NHN0 477 aaPredicted RBP14.78□□□□□ -0.04
UBE2D3-207ENST00000394801 SLC16A6O15403 523 aa14.78□□□□□ -0.04
UBE2D3-207ENST00000394801 ABCB1P08183 1280 aaPredicted RBP14.78□□□□□ -0.04
UBE2D3-207ENST00000394801 JUNBP17275 347 aaPredicted RBP14.78□□□□□ -0.04
UBE2D3-207ENST00000394801 TIA1P31483 386 aaKnown RBP eCLIP14.78□□□□□ -0.047e-8■■■□□ 14.9
UBE2D3-207ENST00000394801 PIGAP37287 484 aa14.78□□□□□ -0.04
UBE2D3-207ENST00000394801 YAP1P46937 504 aaKnown RBP14.78□□□□□ -0.04
UBE2D3-207ENST00000394801 RPS13P62277 151 aaKnown RBP14.78□□□□□ -0.04
UBE2D3-207ENST00000394801 CTBSQ01459 385 aa14.78□□□□□ -0.04
UBE2D3-207ENST00000394801 LRRC74AQ0VAA2 488 aa14.78□□□□□ -0.04
UBE2D3-207ENST00000394801 KCNAB2Q13303 367 aa14.78□□□□□ -0.04
UBE2D3-207ENST00000394801 SPIDRQ14159 915 aa14.78□□□□□ -0.04
UBE2D3-207ENST00000394801 PDE12Q6L8Q7 609 aaKnown RBP14.78□□□□□ -0.04
UBE2D3-207ENST00000394801 TRIM74Q86UV6 250 aa14.78□□□□□ -0.04
UBE2D3-207ENST00000394801 TRAPPC5Q8IUR0 188 aa14.78□□□□□ -0.04
UBE2D3-207ENST00000394801 SYTL1Q8IYJ3 562 aa14.78□□□□□ -0.04
UBE2D3-207ENST00000394801 SYNPOQ8N3V7 929 aa14.78□□□□□ -0.04
UBE2D3-207ENST00000394801 VPS37AQ8NEZ2 397 aa14.78□□□□□ -0.04
UBE2D3-207ENST00000394801 SMG7Q92540 1137 aaKnown RBP14.78□□□□□ -0.04
UBE2D3-207ENST00000394801 SH3KBP1Q96B97 665 aa14.78□□□□□ -0.04
UBE2D3-207ENST00000394801 EFCAB11Q9BUY7 163 aa14.78□□□□□ -0.04
UBE2D3-207ENST00000394801 GABARAPL1Q9H0R8 117 aa14.78□□□□□ -0.04
UBE2D3-207ENST00000394801 CHST8Q9H2A9 424 aa14.78□□□□□ -0.04
UBE2D3-207ENST00000394801 TMEM245Q9H330 911 aa14.78□□□□□ -0.04
UBE2D3-207ENST00000394801 POLR1BQ9H9Y6 1135 aa14.78□□□□□ -0.04
UBE2D3-207ENST00000394801 ITM2CQ9NQX7 267 aa14.78□□□□□ -0.04
UBE2D3-207ENST00000394801 PRKAG2Q9UGJ0 569 aa14.78□□□□□ -0.04
UBE2D3-207ENST00000394801 AP1M2Q9Y6Q5 423 aa14.78□□□□□ -0.04
UBE2D3-207ENST00000394801 TCF20Q9UGU0 1960 aaKnown RBP14.78□□□□□ -0.04
UBE2D3-207ENST00000394801 PCM1Q15154 2024 aa14.77□□□□□ -0.04
UBE2D3-207ENST00000394801 E2F6O75461 281 aa14.77□□□□□ -0.04
UBE2D3-207ENST00000394801 CPSF4O95639 269 aaKnown RBP14.77□□□□□ -0.04
UBE2D3-207ENST00000394801 C1GALT1C1LP0DN25 315 aa14.77□□□□□ -0.04
UBE2D3-207ENST00000394801 PPIBP23284 216 aaKnown RBP14.77□□□□□ -0.04
UBE2D3-207ENST00000394801 CRHBPP24387 322 aa14.77□□□□□ -0.04
UBE2D3-207ENST00000394801 ACADLP28330 430 aa14.77□□□□□ -0.04
UBE2D3-207ENST00000394801 RAB39AQ14964 217 aa14.77□□□□□ -0.04
UBE2D3-207ENST00000394801 ANKRD34AQ69YU3 496 aa14.77□□□□□ -0.04
UBE2D3-207ENST00000394801 RAET1GQ6H3X3 334 aa14.77□□□□□ -0.04
UBE2D3-207ENST00000394801 CBLL1Q75N03 491 aa14.77□□□□□ -0.04
UBE2D3-207ENST00000394801 TMPRSS11BQ86T26 416 aa14.77□□□□□ -0.04
UBE2D3-207ENST00000394801 ARL10Q8N8L6 244 aa14.77□□□□□ -0.04
UBE2D3-207ENST00000394801 PPP1R16AQ96I34 528 aa14.77□□□□□ -0.04
UBE2D3-207ENST00000394801 TM9SF3Q9HD45 589 aa14.77□□□□□ -0.04
UBE2D3-207ENST00000394801 ATP6V1HQ9UI12 483 aa14.77□□□□□ -0.04
UBE2D3-207ENST00000394801 LOC100130705A0A1B0GUX0 176 aa14.77□□□□□ -0.05
UBE2D3-207ENST00000394801 ZSCAN9O15535 394 aaPredicted RBP14.77□□□□□ -0.05
UBE2D3-207ENST00000394801 VEGFDO43915 354 aa14.77□□□□□ -0.05
UBE2D3-207ENST00000394801 MMP20O60882 483 aa14.77□□□□□ -0.05
UBE2D3-207ENST00000394801 PRKACGP22612 351 aa14.77□□□□□ -0.05
UBE2D3-207ENST00000394801 DCKP27707 260 aa14.77□□□□□ -0.05
UBE2D3-207ENST00000394801 RAD23AP54725 363 aa14.77□□□□□ -0.05
UBE2D3-207ENST00000394801 EMP3P54852 163 aa14.77□□□□□ -0.05
UBE2D3-207ENST00000394801 TAP2Q03519 686 aa14.77□□□□□ -0.05
UBE2D3-207ENST00000394801 GRSF1Q12849 480 aaKnown RBP eCLIP14.77□□□□□ -0.05
UBE2D3-207ENST00000394801 PPP1R8Q12972 351 aaKnown RBP14.77□□□□□ -0.05
UBE2D3-207ENST00000394801 PAGE2BQ5JRK9 111 aa14.77□□□□□ -0.05
UBE2D3-207ENST00000394801 FAM78AQ5JUQ0 283 aa14.77□□□□□ -0.05
UBE2D3-207ENST00000394801 CATSPEREQ5SY80 951 aa14.77□□□□□ -0.05
UBE2D3-207ENST00000394801 EIF3MQ7L2H7 374 aaKnown RBP14.77□□□□□ -0.05
UBE2D3-207ENST00000394801 TRIM73Q86UV7 250 aa14.77□□□□□ -0.05
UBE2D3-207ENST00000394801 OR2L2Q8NH16 312 aa14.77□□□□□ -0.05
UBE2D3-207ENST00000394801 ZFYVE19Q96K21 471 aa14.77□□□□□ -0.05
UBE2D3-207ENST00000394801 ASB16Q96NS5 453 aa14.77□□□□□ -0.05
UBE2D3-207ENST00000394801 SAMD11Q96NU1 681 aa14.77□□□□□ -0.05
UBE2D3-207ENST00000394801 VNN3Q9NY84 501 aa14.77□□□□□ -0.05
UBE2D3-207ENST00000394801 CORO2BQ9UQ03 480 aa14.77□□□□□ -0.05
UBE2D3-207ENST00000394801 EXO1Q9UQ84 846 aaKnown RBP14.77□□□□□ -0.05
UBE2D3-207ENST00000394801 MGAT4DA6NG13 374 aa14.76□□□□□ -0.05
UBE2D3-207ENST00000394801 TRIM64BA6NI03 449 aa14.76□□□□□ -0.05
UBE2D3-207ENST00000394801 HEPACAM2A8MVW5 462 aa14.76□□□□□ -0.05
UBE2D3-207ENST00000394801 RNASET2O00584 256 aaKnown RBP14.76□□□□□ -0.05
UBE2D3-207ENST00000394801 HS6ST1O60243 411 aa14.76□□□□□ -0.05
UBE2D3-207ENST00000394801 POP7O75817 140 aaKnown RBP14.76□□□□□ -0.05
UBE2D3-207ENST00000394801 ZNF682O95780 498 aa14.76□□□□□ -0.05
UBE2D3-207ENST00000394801 HPCAL1P37235 193 aa14.76□□□□□ -0.05
UBE2D3-207ENST00000394801 ISL1P61371 349 aa14.76□□□□□ -0.05
UBE2D3-207ENST00000394801 IL18R1Q13478 541 aa14.76□□□□□ -0.05
UBE2D3-207ENST00000394801 ZNF234Q14588 700 aa14.76□□□□□ -0.05
UBE2D3-207ENST00000394801 C6orf141Q5SZD1 244 aa14.76□□□□□ -0.05
UBE2D3-207ENST00000394801 OR2T5Q6IEZ7 315 aa14.76□□□□□ -0.05
UBE2D3-207ENST00000394801 ANKRD26P1Q6NSI1 321 aa14.76□□□□□ -0.05
UBE2D3-207ENST00000394801 ERN2Q76MJ5 926 aaKnown RBP14.76□□□□□ -0.05
UBE2D3-207ENST00000394801 CHST15Q7LFX5 561 aaPredicted RBP14.76□□□□□ -0.05
UBE2D3-207ENST00000394801 PIWIL3Q7Z3Z3 882 aaKnown RBP14.76□□□□□ -0.05
UBE2D3-207ENST00000394801 NPAS3Q8IXF0 933 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms