RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 PRSS36Q5K4E3 855 aa17.74■□□□□ 0.43
PCDHA1-202ENST00000394633 CRTC1Q6UUV9 634 aa17.74■□□□□ 0.43
PCDHA1-202ENST00000394633 RFLNAQ6ZTI6 216 aa17.74■□□□□ 0.43
PCDHA1-202ENST00000394633 VRK3Q8IV63 474 aa17.74■□□□□ 0.43
PCDHA1-202ENST00000394633 SYNPOQ8N3V7 929 aa17.74■□□□□ 0.43
PCDHA1-202ENST00000394633 MCFD2Q8NI22 146 aa17.74■□□□□ 0.43
PCDHA1-202ENST00000394633 CSGALNACT1Q8TDX6 532 aa17.74■□□□□ 0.43
PCDHA1-202ENST00000394633 SLC38A4Q969I6 547 aa17.74■□□□□ 0.43
PCDHA1-202ENST00000394633 DACH2Q96NX9 599 aa17.74■□□□□ 0.43
PCDHA1-202ENST00000394633 ITPAQ9BY32 194 aa17.74■□□□□ 0.43
PCDHA1-202ENST00000394633 DCSTAMPQ9H295 470 aa17.74■□□□□ 0.43
PCDHA1-202ENST00000394633 KLHL42Q9P2K6 505 aa17.74■□□□□ 0.43
PCDHA1-202ENST00000394633 VPS4AQ9UN37 437 aa17.74■□□□□ 0.43
PCDHA1-202ENST00000394633 FAM32AQ9Y421 112 aaKnown RBP17.74■□□□□ 0.43
PCDHA1-202ENST00000394633 PCDHGA6Q9Y5G7 932 aa17.74■□□□□ 0.43
PCDHA1-202ENST00000394633 BACE2Q9Y5Z0 518 aa17.74■□□□□ 0.43
PCDHA1-202ENST00000394633 SERTM1A2A2V5 107 aa17.73■□□□□ 0.43
PCDHA1-202ENST00000394633 GFRA2O00451 464 aa17.73■□□□□ 0.43
PCDHA1-202ENST00000394633 SOCS5O75159 536 aa17.73■□□□□ 0.43
PCDHA1-202ENST00000394633 C9P02748 559 aa17.73■□□□□ 0.43
PCDHA1-202ENST00000394633 CRYBA2P53672 197 aa17.73■□□□□ 0.43
PCDHA1-202ENST00000394633 SRSF11Q05519 484 aaKnown RBP17.73■□□□□ 0.43
PCDHA1-202ENST00000394633 HSPA14Q0VDF9 509 aa17.73■□□□□ 0.43
PCDHA1-202ENST00000394633 ABRQ12979 859 aa17.73■□□□□ 0.43
PCDHA1-202ENST00000394633 RETSATQ6NUM9 610 aa17.73■□□□□ 0.43
PCDHA1-202ENST00000394633 Q6ZPB1 254 aaPredicted RBP17.73■□□□□ 0.43
PCDHA1-202ENST00000394633 PSMA8Q8TAA3 256 aa17.73■□□□□ 0.43
PCDHA1-202ENST00000394633 ADAMTS19Q8TE59 1207 aa17.73■□□□□ 0.43
PCDHA1-202ENST00000394633 SKA2Q8WVK7 121 aaPredicted RBP17.73■□□□□ 0.43
PCDHA1-202ENST00000394633 TPD52L3Q96J77 140 aa17.73■□□□□ 0.43
PCDHA1-202ENST00000394633 C7orf34Q96L11 122 aa17.73■□□□□ 0.43
PCDHA1-202ENST00000394633 COPS8Q99627 209 aa17.73■□□□□ 0.43
PCDHA1-202ENST00000394633 ZBTB20Q9HC78 741 aaPredicted RBP17.73■□□□□ 0.43
PCDHA1-202ENST00000394633 KIAA1522Q9P206 1035 aaPredicted RBP17.73■□□□□ 0.43
PCDHA1-202ENST00000394633 RNF6Q9Y252 685 aa17.73■□□□□ 0.43
PCDHA1-202ENST00000394633 OBSL1O75147 1896 aa17.73■□□□□ 0.43
PCDHA1-202ENST00000394633 GREM1O60565 184 aa17.72■□□□□ 0.43
PCDHA1-202ENST00000394633 ZNF821O75541 412 aaPredicted RBP17.72■□□□□ 0.43
PCDHA1-202ENST00000394633 NTRK1P04629 796 aa17.72■□□□□ 0.43
PCDHA1-202ENST00000394633 C8GP07360 202 aa17.72■□□□□ 0.43
PCDHA1-202ENST00000394633 COX7A2P14406 83 aa17.72■□□□□ 0.43
PCDHA1-202ENST00000394633 ZXDBP98169 803 aa17.72■□□□□ 0.43
PCDHA1-202ENST00000394633 KIAA1958Q8N8K9 716 aa17.72■□□□□ 0.43
PCDHA1-202ENST00000394633 ASB11Q8WXH4 323 aa17.72■□□□□ 0.43
PCDHA1-202ENST00000394633 HRASLS5Q96KN8 279 aa17.72■□□□□ 0.43
PCDHA1-202ENST00000394633 P2RY13Q9BPV8 354 aa17.72■□□□□ 0.43
PCDHA1-202ENST00000394633 C2orf49Q9BVC5 232 aaPredicted RBP17.72■□□□□ 0.43
PCDHA1-202ENST00000394633 GABARAPL3Q9BY60 117 aa17.72■□□□□ 0.43
PCDHA1-202ENST00000394633 EPS8L2Q9H6S3 715 aa17.72■□□□□ 0.43
PCDHA1-202ENST00000394633 SLCO3A1Q9UIG8 710 aa17.72■□□□□ 0.43
PCDHA1-202ENST00000394633 PDE4DIPQ5VU43 2346 aa17.72■□□□□ 0.43
PCDHA1-202ENST00000394633 HTR3EA5X5Y0 456 aa17.72■□□□□ 0.43
PCDHA1-202ENST00000394633 M0R082 166 aa17.72■□□□□ 0.43
PCDHA1-202ENST00000394633 FGF18O76093 207 aa17.72■□□□□ 0.43
PCDHA1-202ENST00000394633 VIPP01282 170 aa17.72■□□□□ 0.43
PCDHA1-202ENST00000394633 NUDT7P0C024 238 aa17.72■□□□□ 0.43
PCDHA1-202ENST00000394633 HIST1H2AGP0C0S8 130 aaPredicted RBP17.72■□□□□ 0.43
PCDHA1-202ENST00000394633 PCSK2P16519 638 aa17.72■□□□□ 0.43
PCDHA1-202ENST00000394633 HIST1H2ADP20671 130 aa17.72■□□□□ 0.43
PCDHA1-202ENST00000394633 KCNJ10P78508 379 aa17.72■□□□□ 0.43
PCDHA1-202ENST00000394633 DDX53Q86TM3 631 aaKnown RBP17.72■□□□□ 0.43
PCDHA1-202ENST00000394633 HIST1H2AHQ96KK5 128 aa17.72■□□□□ 0.43
PCDHA1-202ENST00000394633 HIST1H2AJQ99878 128 aa17.72■□□□□ 0.43
PCDHA1-202ENST00000394633 H2AFJQ9BTM1 129 aa17.72■□□□□ 0.43
PCDHA1-202ENST00000394633 ANKHQ9HCJ1 492 aa17.72■□□□□ 0.43
PCDHA1-202ENST00000394633 DNAJC11Q9NVH1 559 aa17.72■□□□□ 0.43
PCDHA1-202ENST00000394633 FAM120CQ9NX05 1096 aaKnown RBP17.72■□□□□ 0.43
PCDHA1-202ENST00000394633 ANKMY1Q9P2S6 941 aa17.72■□□□□ 0.43
PCDHA1-202ENST00000394633 BTBD3Q9Y2F9 522 aa17.72■□□□□ 0.43
PCDHA1-202ENST00000394633 UNC80Q8N2C7 3258 aa17.72■□□□□ 0.43
PCDHA1-202ENST00000394633 EIF3FO00303 357 aaPredicted RBP17.71■□□□□ 0.43
PCDHA1-202ENST00000394633 PRMT3O60678 531 aa17.71■□□□□ 0.43
PCDHA1-202ENST00000394633 CSNK1DP48730 415 aa17.71■□□□□ 0.43
PCDHA1-202ENST00000394633 HNMTP50135 292 aa17.71■□□□□ 0.43
PCDHA1-202ENST00000394633 CHIT1Q13231 466 aa17.71■□□□□ 0.43
PCDHA1-202ENST00000394633 SF1Q15637 639 aaKnown RBP17.71■□□□□ 0.43
PCDHA1-202ENST00000394633 TAF12Q16514 161 aa17.71■□□□□ 0.43
PCDHA1-202ENST00000394633 LRRC66Q68CR7 880 aa17.71■□□□□ 0.43
PCDHA1-202ENST00000394633 OR8J2Q8NGG1 315 aa17.71■□□□□ 0.43
PCDHA1-202ENST00000394633 CDC26Q8NHZ8 85 aa17.71■□□□□ 0.43
PCDHA1-202ENST00000394633 VOPP1Q96AW1 172 aa17.71■□□□□ 0.43
PCDHA1-202ENST00000394633 KCNC2Q96PR1 638 aa17.71■□□□□ 0.43
PCDHA1-202ENST00000394633 EPYCQ99645 322 aa17.71■□□□□ 0.43
PCDHA1-202ENST00000394633 COPS4Q9BT78 406 aa17.71■□□□□ 0.43
PCDHA1-202ENST00000394633 KLHL25Q9H0H3 589 aa17.71■□□□□ 0.43
PCDHA1-202ENST00000394633 ATG10Q9H0Y0 220 aa17.71■□□□□ 0.43
PCDHA1-202ENST00000394633 CHST8Q9H2A9 424 aa17.71■□□□□ 0.43
PCDHA1-202ENST00000394633 PRDM8Q9NQV8 689 aa17.71■□□□□ 0.43
PCDHA1-202ENST00000394633 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.71■□□□□ 0.43
PCDHA1-202ENST00000394633 PCDHB11Q9Y5F2 797 aa17.71■□□□□ 0.43
PCDHA1-202ENST00000394633 GPC6Q9Y625 555 aaPredicted RBP17.71■□□□□ 0.43
PCDHA1-202ENST00000394633 METTL15A6NJ78 407 aa17.71■□□□□ 0.43
PCDHA1-202ENST00000394633 NUAK1O60285 661 aa17.71■□□□□ 0.43
PCDHA1-202ENST00000394633 DPM1O60762 260 aa17.71■□□□□ 0.43
PCDHA1-202ENST00000394633 UPK1BO75841 260 aa17.71■□□□□ 0.43
PCDHA1-202ENST00000394633 LATS1O95835 1130 aa17.71■□□□□ 0.43
PCDHA1-202ENST00000394633 URODP06132 367 aa17.71■□□□□ 0.43
PCDHA1-202ENST00000394633 LAMP1P11279 417 aa17.71■□□□□ 0.43
PCDHA1-202ENST00000394633 JUPP14923 745 aa17.71■□□□□ 0.43
PCDHA1-202ENST00000394633 UGT2B10P36537 528 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms