RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 TSTA3Q13630 321 aaPredicted RBP13.02□□□□□ -0.32
GTF2F1-201ENST00000394456 DUOXA1Q1HG43 343 aa13.02□□□□□ -0.32
GTF2F1-201ENST00000394456 LRRC70Q7Z2Q7 622 aa13.02□□□□□ -0.32
GTF2F1-201ENST00000394456 SLCO6A1Q86UG4 719 aa13.02□□□□□ -0.32
GTF2F1-201ENST00000394456 HIPK1Q86Z02 1210 aa13.02□□□□□ -0.32
GTF2F1-201ENST00000394456 NELL1Q92832 810 aa13.02□□□□□ -0.32
GTF2F1-201ENST00000394456 TESCQ96BS2 214 aa13.02□□□□□ -0.32
GTF2F1-201ENST00000394456 SH3YL1Q96HL8 342 aaPredicted RBP13.02□□□□□ -0.32
GTF2F1-201ENST00000394456 ZNF641Q96N77 438 aaPredicted RBP13.02□□□□□ -0.32
GTF2F1-201ENST00000394456 HHIPQ96QV1 700 aa13.02□□□□□ -0.32
GTF2F1-201ENST00000394456 TRIT1Q9H3H1 467 aaKnown RBP13.02□□□□□ -0.32
GTF2F1-201ENST00000394456 SLC6A14Q9UN76 642 aa13.02□□□□□ -0.32
GTF2F1-201ENST00000394456 SH2B3Q9UQQ2 575 aa13.02□□□□□ -0.32
GTF2F1-201ENST00000394456 NAALAD2Q9Y3Q0 740 aa13.02□□□□□ -0.32
GTF2F1-201ENST00000394456 GMPPBQ9Y5P6 360 aa13.02□□□□□ -0.32
GTF2F1-201ENST00000394456 USP34Q70CQ2 3546 aa13.02□□□□□ -0.33
GTF2F1-201ENST00000394456 IGLV3-16A0A075B6K0 115 aa13.02□□□□□ -0.33
GTF2F1-201ENST00000394456 SULT1C4O75897 302 aa13.02□□□□□ -0.33
GTF2F1-201ENST00000394456 PRPS2P11908 318 aa13.02□□□□□ -0.33
GTF2F1-201ENST00000394456 EN2P19622 333 aaPredicted RBP13.02□□□□□ -0.33
GTF2F1-201ENST00000394456 ITIH1P19827 911 aa13.02□□□□□ -0.33
GTF2F1-201ENST00000394456 PDHA2P29803 388 aa13.02□□□□□ -0.33
GTF2F1-201ENST00000394456 DGKEP52429 567 aa13.02□□□□□ -0.33
GTF2F1-201ENST00000394456 RAE1P78406 368 aaKnown RBP13.02□□□□□ -0.33
GTF2F1-201ENST00000394456 TUBA3CQ13748 450 aa13.02□□□□□ -0.33
GTF2F1-201ENST00000394456 ZNF77Q15935 545 aa13.02□□□□□ -0.33
GTF2F1-201ENST00000394456 SMU1Q2TAY7 513 aa13.02□□□□□ -0.33
GTF2F1-201ENST00000394456 PRSS36Q5K4E3 855 aa13.02□□□□□ -0.33
GTF2F1-201ENST00000394456 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.02□□□□□ -0.33
GTF2F1-201ENST00000394456 LYPLAL1Q5VWZ2 237 aa13.02□□□□□ -0.33
GTF2F1-201ENST00000394456 KDM4DQ6B0I6 523 aa13.02□□□□□ -0.33
GTF2F1-201ENST00000394456 C1orf52Q8N6N3 182 aaKnown RBP13.02□□□□□ -0.33
GTF2F1-201ENST00000394456 TERB1Q8NA31 727 aa13.02□□□□□ -0.33
GTF2F1-201ENST00000394456 TTC29Q8NA56 475 aaPredicted RBP13.02□□□□□ -0.33
GTF2F1-201ENST00000394456 OR52E4Q8NGH9 312 aa13.02□□□□□ -0.33
GTF2F1-201ENST00000394456 OR2A12Q8NGT7 310 aa13.02□□□□□ -0.33
GTF2F1-201ENST00000394456 SP7Q8TDD2 431 aaPredicted RBP13.02□□□□□ -0.33
GTF2F1-201ENST00000394456 LYSMD1Q96S90 227 aa13.02□□□□□ -0.33
GTF2F1-201ENST00000394456 ITM2BQ9Y287 266 aa13.02□□□□□ -0.33
GTF2F1-201ENST00000394456 GABRR3A8MPY1 467 aa13.01□□□□□ -0.33
GTF2F1-201ENST00000394456 TTC34A8MYJ7 566 aa13.01□□□□□ -0.33
GTF2F1-201ENST00000394456 GFYI3L273 518 aa13.01□□□□□ -0.33
GTF2F1-201ENST00000394456 NUAK1O60285 661 aa13.01□□□□□ -0.33
GTF2F1-201ENST00000394456 GCM2O75603 506 aaPredicted RBP13.01□□□□□ -0.33
GTF2F1-201ENST00000394456 POP4O95707 220 aaKnown RBP13.01□□□□□ -0.33
GTF2F1-201ENST00000394456 LBX1P52954 281 aa13.01□□□□□ -0.33
GTF2F1-201ENST00000394456 GABARAPL2P60520 117 aa13.01□□□□□ -0.33
GTF2F1-201ENST00000394456 SLC35A2P78381 396 aa13.01□□□□□ -0.33
GTF2F1-201ENST00000394456 IQCCQ4KMZ1 466 aa13.01□□□□□ -0.33
GTF2F1-201ENST00000394456 COX20Q5RI15 118 aa13.01□□□□□ -0.33
GTF2F1-201ENST00000394456 GPR153Q6NV75 609 aa13.01□□□□□ -0.33
GTF2F1-201ENST00000394456 TRIM74Q86UV6 250 aa13.01□□□□□ -0.33
GTF2F1-201ENST00000394456 ATG16L2Q8NAA4 619 aa13.01□□□□□ -0.33
GTF2F1-201ENST00000394456 OR4K1Q8NGD4 311 aa13.01□□□□□ -0.33
GTF2F1-201ENST00000394456 FBLIM1Q8WUP2 373 aa13.01□□□□□ -0.33
GTF2F1-201ENST00000394456 GLMNQ92990 594 aa13.01□□□□□ -0.33
GTF2F1-201ENST00000394456 KCNC2Q96PR1 638 aa13.01□□□□□ -0.33
GTF2F1-201ENST00000394456 RIOK2Q9BVS4 552 aaKnown RBP13.01□□□□□ -0.33
GTF2F1-201ENST00000394456 POLE4Q9NR33 117 aa13.01□□□□□ -0.33
GTF2F1-201ENST00000394456 TRNAU1APQ9NX07 287 aaKnown RBP13.01□□□□□ -0.33
GTF2F1-201ENST00000394456 ORC6Q9Y5N6 252 aa13.01□□□□□ -0.33
GTF2F1-201ENST00000394456 EVPLLA8MZ36 301 aa13.01□□□□□ -0.33
GTF2F1-201ENST00000394456 TSPAN6O43657 245 aa13.01□□□□□ -0.33
GTF2F1-201ENST00000394456 PCDH7O60245 1069 aa13.01□□□□□ -0.33
GTF2F1-201ENST00000394456 PCDHGA12O60330 932 aa13.01□□□□□ -0.33
GTF2F1-201ENST00000394456 UGT2B11O75310 529 aa13.01□□□□□ -0.33
GTF2F1-201ENST00000394456 WBP4O75554 376 aaKnown RBP13.01□□□□□ -0.33
GTF2F1-201ENST00000394456 CCNDBP1O95273 360 aa13.01□□□□□ -0.33
GTF2F1-201ENST00000394456 FABP3P05413 133 aa13.01□□□□□ -0.33
GTF2F1-201ENST00000394456 RYKP34925 604 aa13.01□□□□□ -0.33
GTF2F1-201ENST00000394456 OR1E2P47887 323 aa13.01□□□□□ -0.33
GTF2F1-201ENST00000394456 METAP1P53582 386 aa13.01□□□□□ -0.33
GTF2F1-201ENST00000394456 ZNF385BQ569K4 471 aa13.01□□□□□ -0.33
GTF2F1-201ENST00000394456 RNF165Q6ZSG1 346 aa13.01□□□□□ -0.33
GTF2F1-201ENST00000394456 AHSA2Q719I0 299 aa13.01□□□□□ -0.33
GTF2F1-201ENST00000394456 THOC6Q86W42 341 aaKnown RBP13.01□□□□□ -0.33
GTF2F1-201ENST00000394456 ZNF540Q8NDQ6 660 aa13.01□□□□□ -0.33
GTF2F1-201ENST00000394456 OR52J3Q8NH60 311 aa13.01□□□□□ -0.33
GTF2F1-201ENST00000394456 LRRC3BQ96PB8 259 aa13.01□□□□□ -0.33
GTF2F1-201ENST00000394456 MCCC1Q96RQ3 725 aaPredicted RBP13.01□□□□□ -0.33
GTF2F1-201ENST00000394456 BTBD2Q9BX70 525 aa13.01□□□□□ -0.33
GTF2F1-201ENST00000394456 RLIMQ9NVW2 624 aa13.01□□□□□ -0.33
GTF2F1-201ENST00000394456 RAPGEFL1Q9UHV5 662 aa13.01□□□□□ -0.33
GTF2F1-201ENST00000394456 ACSL6Q9UKU0 697 aa13.01□□□□□ -0.33
GTF2F1-201ENST00000394456 GRXCR1A8MXD5 290 aa13□□□□□ -0.33
GTF2F1-201ENST00000394456 SEMG1P04279 462 aa13□□□□□ -0.33
GTF2F1-201ENST00000394456 CBSLP0DN79 551 aa13□□□□□ -0.33
GTF2F1-201ENST00000394456 ITGAMP11215 1152 aa13□□□□□ -0.33
GTF2F1-201ENST00000394456 JUPP14923 745 aa13□□□□□ -0.33
GTF2F1-201ENST00000394456 CBSP35520 551 aa13□□□□□ -0.33
GTF2F1-201ENST00000394456 MC1RQ01726 317 aa13□□□□□ -0.33
GTF2F1-201ENST00000394456 MEF2AQ02078 507 aaPredicted RBP13□□□□□ -0.33
GTF2F1-201ENST00000394456 MTAPQ13126 283 aa13□□□□□ -0.33
GTF2F1-201ENST00000394456 SYT16Q17RD7 645 aa13□□□□□ -0.33
GTF2F1-201ENST00000394456 TCEAL5Q5H9L2 206 aa13□□□□□ -0.33
GTF2F1-201ENST00000394456 GDPD4Q6W3E5 623 aa13□□□□□ -0.33
GTF2F1-201ENST00000394456 HORMAD1Q86X24 394 aa13□□□□□ -0.33
GTF2F1-201ENST00000394456 LSRQ86X29 649 aaPredicted RBP13□□□□□ -0.33
GTF2F1-201ENST00000394456 ANKRD13BQ86YJ7 626 aa13□□□□□ -0.33
GTF2F1-201ENST00000394456 C7orf61Q8IZ16 206 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms