RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 CCDC177Q9NQR7 707 aaPredicted RBP16.54■□□□□ 0.24
SNRPA1-202ENST00000394082 SUCOQ9UBS9 1254 aaKnown RBP16.54■□□□□ 0.24
SNRPA1-202ENST00000394082 PRSS44E7EML9 344 aa16.53■□□□□ 0.24
SNRPA1-202ENST00000394082 CEP104O60308 925 aa16.53■□□□□ 0.24
SNRPA1-202ENST00000394082 SYF2O95926 243 aaKnown RBP16.53■□□□□ 0.24
SNRPA1-202ENST00000394082 CCDC175P0C221 793 aa16.53■□□□□ 0.24
SNRPA1-202ENST00000394082 CCND1P24385 295 aa16.53■□□□□ 0.24
SNRPA1-202ENST00000394082 BCL6P41182 706 aa16.53■□□□□ 0.24
SNRPA1-202ENST00000394082 CA7P43166 264 aa16.53■□□□□ 0.24
SNRPA1-202ENST00000394082 MAT1AQ00266 395 aaKnown RBP16.53■□□□□ 0.24
SNRPA1-202ENST00000394082 RBPJQ06330 500 aa16.53■□□□□ 0.24
SNRPA1-202ENST00000394082 CTBP1Q13363 440 aa16.53■□□□□ 0.24
SNRPA1-202ENST00000394082 NAA30Q147X3 362 aaPredicted RBP16.53■□□□□ 0.24
SNRPA1-202ENST00000394082 DENND6AQ8IWF6 608 aa16.53■□□□□ 0.24
SNRPA1-202ENST00000394082 ZNF808Q8N4W9 903 aaPredicted RBP16.53■□□□□ 0.24
SNRPA1-202ENST00000394082 CAMKVQ8NCB2 501 aa16.53■□□□□ 0.24
SNRPA1-202ENST00000394082 OR9A4Q8NGU2 314 aa16.53■□□□□ 0.24
SNRPA1-202ENST00000394082 OR51Q1Q8NH59 317 aa16.53■□□□□ 0.24
SNRPA1-202ENST00000394082 ZNF669Q96BR6 464 aaPredicted RBP16.53■□□□□ 0.24
SNRPA1-202ENST00000394082 MOCOSQ96EN8 888 aa16.53■□□□□ 0.24
SNRPA1-202ENST00000394082 ZNF354BQ96LW1 612 aa16.53■□□□□ 0.24
SNRPA1-202ENST00000394082 CCDC138Q96M89 665 aa16.53■□□□□ 0.24
SNRPA1-202ENST00000394082 SEC14L3Q9UDX4 400 aa16.53■□□□□ 0.24
SNRPA1-202ENST00000394082 SCN2AQ99250 2005 aa16.52■□□□□ 0.24
SNRPA1-202ENST00000394082 UNC5CO95185 931 aa16.52■□□□□ 0.24
SNRPA1-202ENST00000394082 PRF1P14222 555 aa16.52■□□□□ 0.24
SNRPA1-202ENST00000394082 ELAVL4P26378 380 aaKnown RBP16.52■□□□□ 0.24
SNRPA1-202ENST00000394082 MST1P26927 711 aa16.52■□□□□ 0.24
SNRPA1-202ENST00000394082 PTGER4P35408 488 aa16.52■□□□□ 0.24
SNRPA1-202ENST00000394082 ZNF33BQ06732 778 aa16.52■□□□□ 0.24
SNRPA1-202ENST00000394082 CUL1Q13616 776 aa16.52■□□□□ 0.24
SNRPA1-202ENST00000394082 EXT1Q16394 746 aa16.52■□□□□ 0.24
SNRPA1-202ENST00000394082 ANKRD22Q5VYY1 191 aa16.52■□□□□ 0.24
SNRPA1-202ENST00000394082 UGT3A1Q6NUS8 523 aa16.52■□□□□ 0.24
SNRPA1-202ENST00000394082 BNC2Q6ZN30 1099 aaPredicted RBP16.52■□□□□ 0.24
SNRPA1-202ENST00000394082 UBE2R2Q712K3 238 aaPredicted RBP16.52■□□□□ 0.24
SNRPA1-202ENST00000394082 M1APQ8TC57 530 aa16.52■□□□□ 0.24
SNRPA1-202ENST00000394082 SERPINB12Q96P63 405 aa16.52■□□□□ 0.24
SNRPA1-202ENST00000394082 GPR21Q99679 349 aa16.52■□□□□ 0.24
SNRPA1-202ENST00000394082 SARGQ9BW04 601 aa16.52■□□□□ 0.24
SNRPA1-202ENST00000394082 CHST11Q9NPF2 352 aa16.52■□□□□ 0.24
SNRPA1-202ENST00000394082 LZTFL1Q9NQ48 299 aa16.52■□□□□ 0.24
SNRPA1-202ENST00000394082 FBXO6Q9NRD1 293 aaPredicted RBP16.52■□□□□ 0.24
SNRPA1-202ENST00000394082 SLC22A7Q9Y694 548 aa16.52■□□□□ 0.24
SNRPA1-202ENST00000394082 MYO7BQ6PIF6 2116 aa16.52■□□□□ 0.23
SNRPA1-202ENST00000394082 FBN2P35556 2912 aa16.52■□□□□ 0.23
SNRPA1-202ENST00000394082 ARHGAP10A1A4S6 786 aa16.51■□□□□ 0.23
SNRPA1-202ENST00000394082 MLYCDO95822 493 aa16.51■□□□□ 0.23
SNRPA1-202ENST00000394082 KRT14P02533 472 aa16.51■□□□□ 0.23
SNRPA1-202ENST00000394082 C8GP07360 202 aa16.51■□□□□ 0.23
SNRPA1-202ENST00000394082 AGAP20933 346 aa16.51■□□□□ 0.23
SNRPA1-202ENST00000394082 SLC1A2P43004 574 aa16.51■□□□□ 0.23
SNRPA1-202ENST00000394082 TBPL1P62380 186 aa16.51■□□□□ 0.23
SNRPA1-202ENST00000394082 CSNK1G2P78368 415 aa16.51■□□□□ 0.23
SNRPA1-202ENST00000394082 SP140Q13342 867 aa16.51■□□□□ 0.23
SNRPA1-202ENST00000394082 TRIP13Q15645 432 aaPredicted RBP16.51■□□□□ 0.23
SNRPA1-202ENST00000394082 BTBD16Q32M84 506 aa16.51■□□□□ 0.23
SNRPA1-202ENST00000394082 ACER2Q5QJU3 275 aa16.51■□□□□ 0.23
SNRPA1-202ENST00000394082 PLD3Q8IV08 490 aa16.51■□□□□ 0.23
SNRPA1-202ENST00000394082 LGI4Q8N135 537 aa16.51■□□□□ 0.23
SNRPA1-202ENST00000394082 PLPP5Q8NEB5 264 aa16.51■□□□□ 0.23
SNRPA1-202ENST00000394082 THAP3Q8WTV1 239 aaPredicted RBP16.51■□□□□ 0.23
SNRPA1-202ENST00000394082 CCDC120Q96HB5 630 aa16.51■□□□□ 0.23
SNRPA1-202ENST00000394082 OR1F2PQ96R84 312 aa16.51■□□□□ 0.23
SNRPA1-202ENST00000394082 AARSD1Q9BTE6 412 aaKnown RBP16.51■□□□□ 0.23
SNRPA1-202ENST00000394082 MMP25Q9NPA2 562 aa16.51■□□□□ 0.23
SNRPA1-202ENST00000394082 FBXO5Q9UKT4 447 aa16.51■□□□□ 0.23
SNRPA1-202ENST00000394082 NEU2Q9Y3R4 380 aa16.51■□□□□ 0.23
SNRPA1-202ENST00000394082 TRGV8A0A0C4DH27 118 aa16.5■□□□□ 0.23
SNRPA1-202ENST00000394082 CCL21O00585 134 aa16.5■□□□□ 0.23
SNRPA1-202ENST00000394082 SLC16A5O15375 505 aa16.5■□□□□ 0.23
SNRPA1-202ENST00000394082 SEC24DO94855 1032 aaPredicted RBP16.5■□□□□ 0.23
SNRPA1-202ENST00000394082 F10P00742 488 aa16.5■□□□□ 0.23
SNRPA1-202ENST00000394082 XCR1P46094 333 aa16.5■□□□□ 0.23
SNRPA1-202ENST00000394082 VPS41P49754 854 aa16.5■□□□□ 0.23
SNRPA1-202ENST00000394082 RGS4P49798 205 aa16.5■□□□□ 0.23
SNRPA1-202ENST00000394082 CASP6P55212 293 aa16.5■□□□□ 0.23
SNRPA1-202ENST00000394082 SNRPNP63162 240 aaKnown RBP16.5■□□□□ 0.23
SNRPA1-202ENST00000394082 CYP1B1Q16678 543 aa16.5■□□□□ 0.23
SNRPA1-202ENST00000394082 MEP1AQ16819 746 aa16.5■□□□□ 0.23
SNRPA1-202ENST00000394082 ZNF630Q2M218 657 aaPredicted RBP16.5■□□□□ 0.23
SNRPA1-202ENST00000394082 MINDY4Q4G0A6 757 aa16.5■□□□□ 0.23
SNRPA1-202ENST00000394082 KRTCAP3Q53RY4 240 aa16.5■□□□□ 0.23
SNRPA1-202ENST00000394082 ZNF766Q5HY98 468 aa16.5■□□□□ 0.23
SNRPA1-202ENST00000394082 NIPAL1Q6NVV3 410 aa16.5■□□□□ 0.23
SNRPA1-202ENST00000394082 XKRXQ6PP77 449 aa16.5■□□□□ 0.23
SNRPA1-202ENST00000394082 PIWIL4Q7Z3Z4 852 aaKnown RBP16.5■□□□□ 0.23
SNRPA1-202ENST00000394082 ANKRD37Q7Z713 158 aa16.5■□□□□ 0.23
SNRPA1-202ENST00000394082 MCEMP1Q8IX19 187 aa16.5■□□□□ 0.23
SNRPA1-202ENST00000394082 SRRM1Q8IYB3 904 aaKnown RBP16.5■□□□□ 0.23
SNRPA1-202ENST00000394082 CPNE9Q8IYJ1 553 aa16.5■□□□□ 0.23
SNRPA1-202ENST00000394082 RASGEF1CQ8N431 466 aa16.5■□□□□ 0.23
SNRPA1-202ENST00000394082 MDS2Q8NDY4 140 aa16.5■□□□□ 0.23
SNRPA1-202ENST00000394082 FAM167BQ9BTA0 163 aa16.5■□□□□ 0.23
SNRPA1-202ENST00000394082 SGPP1Q9BX95 441 aa16.5■□□□□ 0.23
SNRPA1-202ENST00000394082 UNKQ9C0B0 810 aaKnown RBP16.5■□□□□ 0.23
SNRPA1-202ENST00000394082 PARVBQ9HBI1 364 aa16.5■□□□□ 0.23
SNRPA1-202ENST00000394082 ANKHQ9HCJ1 492 aa16.5■□□□□ 0.23
SNRPA1-202ENST00000394082 C20orf96Q9NUD7 363 aaPredicted RBP16.5■□□□□ 0.23
SNRPA1-202ENST00000394082 DCHS2Q6V1P9 2916 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms