RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 TRIM5Q9C035 493 aa14.5□□□□□ -0.09
CHMP3-202ENST00000393773 KLHL1Q9NR64 748 aa14.5□□□□□ -0.09
CHMP3-202ENST00000393773 UTP6Q9NYH9 597 aaKnown RBP14.5□□□□□ -0.09
CHMP3-202ENST00000393773 PAK5Q9P286 719 aa14.5□□□□□ -0.09
CHMP3-202ENST00000393773 C19orf25Q9UFG5 118 aaPredicted RBP14.5□□□□□ -0.09
CHMP3-202ENST00000393773 ZNF148Q9UQR1 794 aa14.5□□□□□ -0.09
CHMP3-202ENST00000393773 CAPN6Q9Y6Q1 641 aa14.5□□□□□ -0.09
CHMP3-202ENST00000393773 INTS1Q8N201 2190 aaKnown RBP14.5□□□□□ -0.09
CHMP3-202ENST00000393773 SPG11Q96JI7 2443 aa14.5□□□□□ -0.09
CHMP3-202ENST00000393773 PHF3Q92576 2039 aaKnown RBP14.49□□□□□ -0.09
CHMP3-202ENST00000393773 NIPBLQ6KC79 2804 aaeCLIP14.49□□□□□ -0.09
CHMP3-202ENST00000393773 OR2W5A6NFC9 320 aa14.49□□□□□ -0.09
CHMP3-202ENST00000393773 GOLGA8KD6RF30 607 aa14.49□□□□□ -0.09
CHMP3-202ENST00000393773 NPIPA5E9PKD4 350 aa14.49□□□□□ -0.09
CHMP3-202ENST00000393773 H3BMM5 538 aa14.49□□□□□ -0.09
CHMP3-202ENST00000393773 GOLGA8TH3BQL2 631 aa14.49□□□□□ -0.09
CHMP3-202ENST00000393773 SMAPO00193 183 aa14.49□□□□□ -0.09
CHMP3-202ENST00000393773 CATP04040 527 aaKnown RBP14.49□□□□□ -0.09
CHMP3-202ENST00000393773 ZSCAN5DPP0CG00 497 aa14.49□□□□□ -0.09
CHMP3-202ENST00000393773 CAPN3P20807 821 aa14.49□□□□□ -0.09
CHMP3-202ENST00000393773 EEF1DP29692 281 aaKnown RBP14.49□□□□□ -0.09
CHMP3-202ENST00000393773 HSD17B2P37059 387 aa14.49□□□□□ -0.09
CHMP3-202ENST00000393773 XCR1P46094 333 aa14.49□□□□□ -0.09
CHMP3-202ENST00000393773 ABATP80404 500 aa14.49□□□□□ -0.09
CHMP3-202ENST00000393773 PTK6Q13882 451 aa14.49□□□□□ -0.09
CHMP3-202ENST00000393773 NDUFA9Q16795 377 aa14.49□□□□□ -0.09
CHMP3-202ENST00000393773 MEP1AQ16819 746 aa14.49□□□□□ -0.09
CHMP3-202ENST00000393773 MFSD4BQ5TF39 518 aa14.49□□□□□ -0.09
CHMP3-202ENST00000393773 ADCK2Q7Z695 626 aa14.49□□□□□ -0.09
CHMP3-202ENST00000393773 SPNS2Q8IVW8 549 aa14.49□□□□□ -0.09
CHMP3-202ENST00000393773 FBXO15Q8NCQ5 510 aaPredicted RBP14.49□□□□□ -0.09
CHMP3-202ENST00000393773 PHF10Q8WUB8 498 aaKnown RBP14.49□□□□□ -0.09
CHMP3-202ENST00000393773 C1orf54Q8WWF1 131 aa14.49□□□□□ -0.09
CHMP3-202ENST00000393773 DMRTA2Q96SC8 542 aa14.49□□□□□ -0.09
CHMP3-202ENST00000393773 SLC30A3Q99726 388 aa14.49□□□□□ -0.09
CHMP3-202ENST00000393773 SPOCK3Q9BQ16 436 aa14.49□□□□□ -0.09
CHMP3-202ENST00000393773 UTP23Q9BRU9 249 aaKnown RBP14.49□□□□□ -0.09
CHMP3-202ENST00000393773 KIFC1Q9BW19 673 aa14.49□□□□□ -0.09
CHMP3-202ENST00000393773 ENKD1Q9H0I2 346 aa14.49□□□□□ -0.09
CHMP3-202ENST00000393773 KCNK13Q9HB14 408 aa14.49□□□□□ -0.09
CHMP3-202ENST00000393773 MMP25Q9NPA2 562 aa14.49□□□□□ -0.09
CHMP3-202ENST00000393773 SYBUQ9NX95 663 aa14.49□□□□□ -0.09
CHMP3-202ENST00000393773 HCN3Q9P1Z3 774 aa14.49□□□□□ -0.09
CHMP3-202ENST00000393773 NPIPA1Q9UND3 350 aa14.49□□□□□ -0.09
CHMP3-202ENST00000393773 ZNF839A8K0R7 811 aa14.48□□□□□ -0.09
CHMP3-202ENST00000393773 ADAM10O14672 748 aa14.48□□□□□ -0.09
CHMP3-202ENST00000393773 ZNHIT1O43257 154 aa14.48□□□□□ -0.09
CHMP3-202ENST00000393773 NEURL1O76050 574 aa14.48□□□□□ -0.09
CHMP3-202ENST00000393773 VAPBO95292 243 aa14.48□□□□□ -0.09
CHMP3-202ENST00000393773 MLYCDO95822 493 aa14.48□□□□□ -0.09
CHMP3-202ENST00000393773 IL1RNP18510 177 aa14.48□□□□□ -0.09
CHMP3-202ENST00000393773 OGNP20774 298 aaKnown RBP14.48□□□□□ -0.09
CHMP3-202ENST00000393773 RPL22P35268 128 aaKnown RBP14.48□□□□□ -0.09
CHMP3-202ENST00000393773 CLCN7P51798 805 aa14.48□□□□□ -0.09
CHMP3-202ENST00000393773 HSF1Q00613 529 aa14.48□□□□□ -0.09
CHMP3-202ENST00000393773 TLE4Q04727 773 aa14.48□□□□□ -0.09
CHMP3-202ENST00000393773 EXT1Q16394 746 aa14.48□□□□□ -0.09
CHMP3-202ENST00000393773 KRTAP21-3Q3LHN1 58 aa14.48□□□□□ -0.09
CHMP3-202ENST00000393773 SPINK14Q6IE38 97 aa14.48□□□□□ -0.09
CHMP3-202ENST00000393773 MRNIPQ6NTE8 343 aa14.48□□□□□ -0.09
CHMP3-202ENST00000393773 TMEM214Q6NUQ4 689 aaKnown RBP14.48□□□□□ -0.09
CHMP3-202ENST00000393773 CES3Q6UWW8 571 aa14.48□□□□□ -0.09
CHMP3-202ENST00000393773 GALNTL5Q7Z4T8 443 aa14.48□□□□□ -0.09
CHMP3-202ENST00000393773 FGD2Q7Z6J4 655 aa14.48□□□□□ -0.09
CHMP3-202ENST00000393773 PCGF5Q86SE9 256 aa14.48□□□□□ -0.09
CHMP3-202ENST00000393773 KIAA1328Q86T90 577 aa14.48□□□□□ -0.09
CHMP3-202ENST00000393773 PDSS2Q86YH6 399 aa14.48□□□□□ -0.09
CHMP3-202ENST00000393773 CEP97Q8IW35 865 aa14.48□□□□□ -0.09
CHMP3-202ENST00000393773 REXO1L1PQ8IX06 675 aa14.48□□□□□ -0.09
CHMP3-202ENST00000393773 CCDC89Q8N998 374 aa14.48□□□□□ -0.09
CHMP3-202ENST00000393773 TMEM178AQ8NBL3 297 aa14.48□□□□□ -0.09
CHMP3-202ENST00000393773 OR51Q1Q8NH59 317 aa14.48□□□□□ -0.09
CHMP3-202ENST00000393773 M1APQ8TC57 530 aa14.48□□□□□ -0.09
CHMP3-202ENST00000393773 AGAP11Q8TF27 550 aa14.48□□□□□ -0.09
CHMP3-202ENST00000393773 MCCC2Q9HCC0 563 aa14.48□□□□□ -0.09
CHMP3-202ENST00000393773 GPAMQ9HCL2 828 aa14.48□□□□□ -0.09
CHMP3-202ENST00000393773 CRYL1Q9Y2S2 319 aa14.48□□□□□ -0.09
CHMP3-202ENST00000393773 MED16Q9Y2X0 877 aa14.48□□□□□ -0.09
CHMP3-202ENST00000393773 HRNRQ86YZ3 2850 aaPredicted RBP14.48□□□□□ -0.09
CHMP3-202ENST00000393773 GABRR3A8MPY1 467 aa14.47□□□□□ -0.09
CHMP3-202ENST00000393773 KIF5CO60282 957 aa14.47□□□□□ -0.09
CHMP3-202ENST00000393773 PTMSP20962 102 aa14.47□□□□□ -0.09
CHMP3-202ENST00000393773 MGAT1P26572 445 aa14.47□□□□□ -0.09
CHMP3-202ENST00000393773 IMPA1P29218 277 aa14.47□□□□□ -0.09
CHMP3-202ENST00000393773 SKIV2L2P42285 1042 aaKnown RBP14.47□□□□□ -0.09
CHMP3-202ENST00000393773 AGTR2P50052 363 aa14.47□□□□□ -0.09
CHMP3-202ENST00000393773 RHAGQ02094 409 aa14.47□□□□□ -0.09
CHMP3-202ENST00000393773 SNX1Q13596 522 aa14.47□□□□□ -0.09
CHMP3-202ENST00000393773 SIX1Q15475 284 aaPredicted RBP14.47□□□□□ -0.09
CHMP3-202ENST00000393773 RNFT1Q5M7Z0 435 aa14.47□□□□□ -0.09
CHMP3-202ENST00000393773 SEL1L2Q5TEA6 688 aa14.47□□□□□ -0.09
CHMP3-202ENST00000393773 KIAA0930Q6ICG6 404 aaPredicted RBP14.47□□□□□ -0.09
CHMP3-202ENST00000393773 PAPD4Q6PIY7 484 aaKnown RBP14.47□□□□□ -0.09
CHMP3-202ENST00000393773 CENPUQ71F23 418 aa14.47□□□□□ -0.09
CHMP3-202ENST00000393773 SLC13A5Q86YT5 568 aaPredicted RBP14.47□□□□□ -0.09
CHMP3-202ENST00000393773 TCF12Q99081 682 aa14.47□□□□□ -0.09
CHMP3-202ENST00000393773 EBNA1BP2Q99848 306 aaKnown RBP14.47□□□□□ -0.09
CHMP3-202ENST00000393773 MACROD1Q9BQ69 325 aa14.47□□□□□ -0.09
CHMP3-202ENST00000393773 ABCF3Q9NUQ8 709 aa14.47□□□□□ -0.09
CHMP3-202ENST00000393773 SOX13Q9UN79 622 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms