RNA–Protein interactions for RNA: ENST00000393083.2

PTN-202, Transcript of pleiotrophin, humanhuman

TSL 5 BASIC

Gene PTN, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-202ENST00000393083 NPPBP16860 134 aa13.04□□□□□ -0.32
PTN-202ENST00000393083 VARSP26640 1264 aaKnown RBP13.04□□□□□ -0.32
PTN-202ENST00000393083 PKLRP30613 574 aa13.04□□□□□ -0.32
PTN-202ENST00000393083 GPR3P46089 330 aa13.04□□□□□ -0.32
PTN-202ENST00000393083 CCL7P80098 99 aa13.04□□□□□ -0.32
PTN-202ENST00000393083 PCDH1Q08174 1060 aa13.04□□□□□ -0.32
PTN-202ENST00000393083 CUL3Q13618 768 aa13.04□□□□□ -0.32
PTN-202ENST00000393083 GSTA3Q16772 222 aa13.04□□□□□ -0.32
PTN-202ENST00000393083 C6orf136Q5SQH8 315 aa13.04□□□□□ -0.32
PTN-202ENST00000393083 FRG2Q64ET8 278 aa13.04□□□□□ -0.32
PTN-202ENST00000393083 SLCO4C1Q6ZQN7 724 aa13.04□□□□□ -0.32
PTN-202ENST00000393083 TMPRSS7Q7RTY8 843 aa13.04□□□□□ -0.32
PTN-202ENST00000393083 TRIM46Q7Z4K8 759 aa13.04□□□□□ -0.32
PTN-202ENST00000393083 Q8N9G6 341 aaPredicted RBP13.04□□□□□ -0.32
PTN-202ENST00000393083 FNDC5Q8NAU1 212 aa13.04□□□□□ -0.32
PTN-202ENST00000393083 AVL9Q8NBF6 648 aa13.04□□□□□ -0.32
PTN-202ENST00000393083 HMGCLL1Q8TB92 370 aa13.04□□□□□ -0.32
PTN-202ENST00000393083 SLC5A11Q8WWX8 675 aa13.04□□□□□ -0.32
PTN-202ENST00000393083 SMPDL3AQ92484 453 aa13.04□□□□□ -0.32
PTN-202ENST00000393083 FRG2BQ96QU4 278 aa13.04□□□□□ -0.32
PTN-202ENST00000393083 NRTNQ99748 197 aa13.04□□□□□ -0.32
PTN-202ENST00000393083 BTBD10Q9BSF8 475 aa13.04□□□□□ -0.32
PTN-202ENST00000393083 HAUS8Q9BT25 410 aa13.04□□□□□ -0.32
PTN-202ENST00000393083 C1orf50Q9BV19 199 aa13.04□□□□□ -0.32
PTN-202ENST00000393083 SLC40A1Q9NP59 571 aa13.04□□□□□ -0.32
PTN-202ENST00000393083 AIG1Q9NVV5 245 aa13.04□□□□□ -0.32
PTN-202ENST00000393083 CCL27Q9Y4X3 112 aa13.04□□□□□ -0.32
PTN-202ENST00000393083 LOC100653049A0A140TA62 436 aa13.03□□□□□ -0.32
PTN-202ENST00000393083 H0YHG0 523 aa13.03□□□□□ -0.32
PTN-202ENST00000393083 GYG2O15488 501 aa13.03□□□□□ -0.32
PTN-202ENST00000393083 HYAL3O43820 417 aaPredicted RBP13.03□□□□□ -0.32
PTN-202ENST00000393083 KRT34O76011 436 aa13.03□□□□□ -0.32
PTN-202ENST00000393083 THRAP10827 490 aa13.03□□□□□ -0.32
PTN-202ENST00000393083 IDO1P14902 403 aa13.03□□□□□ -0.32
PTN-202ENST00000393083 CD1EP15812 388 aa13.03□□□□□ -0.32
PTN-202ENST00000393083 RAB28P51157 221 aa13.03□□□□□ -0.32
PTN-202ENST00000393083 MNAT1P51948 309 aa13.03□□□□□ -0.32
PTN-202ENST00000393083 OR1D5P58170 312 aa13.03□□□□□ -0.32
PTN-202ENST00000393083 RPL38P63173 70 aaKnown RBP13.03□□□□□ -0.32
PTN-202ENST00000393083 IRX1P78414 480 aaPredicted RBP13.03□□□□□ -0.32
PTN-202ENST00000393083 HMGCS1Q01581 520 aa13.03□□□□□ -0.32
PTN-202ENST00000393083 FOXC1Q12948 553 aa13.03□□□□□ -0.32
PTN-202ENST00000393083 CYLC2Q14093 348 aaPredicted RBP13.03□□□□□ -0.32
PTN-202ENST00000393083 RPS6KA2Q15349 733 aa13.03□□□□□ -0.32
PTN-202ENST00000393083 MAPRE2Q15555 327 aa13.03□□□□□ -0.32
PTN-202ENST00000393083 AGKQ53H12 422 aa13.03□□□□□ -0.32
PTN-202ENST00000393083 HES3Q5TGS1 186 aa13.03□□□□□ -0.32
PTN-202ENST00000393083 ZNF761Q86XN6 746 aaPredicted RBP13.03□□□□□ -0.32
PTN-202ENST00000393083 CACTIN-AS1Q8N1I8 211 aa13.03□□□□□ -0.32
PTN-202ENST00000393083 MIER2Q8N344 545 aa13.03□□□□□ -0.32
PTN-202ENST00000393083 OR52E1Q8NGJ3 308 aa13.03□□□□□ -0.32
PTN-202ENST00000393083 RP9Q8TA86 221 aaKnown RBP13.03□□□□□ -0.32
PTN-202ENST00000393083 SH3KBP1Q96B97 665 aa13.03□□□□□ -0.32
PTN-202ENST00000393083 RAB3IPQ96QF0 476 aaPredicted RBP13.03□□□□□ -0.32
PTN-202ENST00000393083 ACPTQ9BZG2 426 aa13.03□□□□□ -0.32
PTN-202ENST00000393083 ABCG4Q9H172 646 aa13.03□□□□□ -0.32
PTN-202ENST00000393083 LRRN3Q9H3W5 708 aa13.03□□□□□ -0.32
PTN-202ENST00000393083 UCK1Q9HA47 277 aa13.03□□□□□ -0.32
PTN-202ENST00000393083 POT1Q9NUX5 634 aa13.03□□□□□ -0.32
PTN-202ENST00000393083 TAC3Q9UHF0 121 aa13.03□□□□□ -0.32
PTN-202ENST00000393083 POLR3HQ9Y535 204 aaPredicted RBP13.03□□□□□ -0.32
PTN-202ENST00000393083 IGHV1OR21-1A0A087WYE8 117 aa13.03□□□□□ -0.32
PTN-202ENST00000393083 FAM221BA6H8Z2 402 aa13.03□□□□□ -0.32
PTN-202ENST00000393083 H0YIV9 168 aa13.03□□□□□ -0.32
PTN-202ENST00000393083 KDM1AO60341 852 aa13.03□□□□□ -0.32
PTN-202ENST00000393083 VIPP01282 170 aa13.03□□□□□ -0.32
PTN-202ENST00000393083 RPLP0P05388 317 aaKnown RBP13.03□□□□□ -0.32
PTN-202ENST00000393083 GPX3P22352 226 aa13.03□□□□□ -0.32
PTN-202ENST00000393083 CD1CP29017 333 aa13.03□□□□□ -0.32
PTN-202ENST00000393083 ALDH4A1P30038 563 aa13.03□□□□□ -0.32
PTN-202ENST00000393083 CASP2P42575 452 aa13.03□□□□□ -0.32
PTN-202ENST00000393083 NEK2P51955 445 aa13.03□□□□□ -0.32
PTN-202ENST00000393083 DIO3P55073 304 aa13.03□□□□□ -0.32
PTN-202ENST00000393083 NME5P56597 212 aa13.03□□□□□ -0.32
PTN-202ENST00000393083 BIRC2Q13490 618 aa13.03□□□□□ -0.32
PTN-202ENST00000393083 SQSTM1Q13501 440 aa13.03□□□□□ -0.32
PTN-202ENST00000393083 E2F2Q14209 437 aa13.03□□□□□ -0.32
PTN-202ENST00000393083 SLBPQ14493 270 aaKnown RBP eCLIP13.03□□□□□ -0.32
PTN-202ENST00000393083 AP5B1Q2VPB7 878 aa13.03□□□□□ -0.32
PTN-202ENST00000393083 CATSPEREQ5SY80 951 aa13.03□□□□□ -0.32
PTN-202ENST00000393083 ATG9BQ674R7 924 aa13.03□□□□□ -0.32
PTN-202ENST00000393083 PAOXQ6QHF9 649 aa13.03□□□□□ -0.32
PTN-202ENST00000393083 TMEM26Q6ZUK4 368 aa13.03□□□□□ -0.32
PTN-202ENST00000393083 TMPRSS12Q86WS5 348 aa13.03□□□□□ -0.32
PTN-202ENST00000393083 RBM15BQ8NDT2 890 aaKnown RBP13.03□□□□□ -0.32
PTN-202ENST00000393083 OR9I1Q8NGQ6 314 aa13.03□□□□□ -0.32
PTN-202ENST00000393083 OR2L8Q8NGY9 312 aa13.03□□□□□ -0.32
PTN-202ENST00000393083 FBXO27Q8NI29 283 aa13.03□□□□□ -0.32
PTN-202ENST00000393083 WDR48Q8TAF3 677 aa13.03□□□□□ -0.32
PTN-202ENST00000393083 WDR20Q8TBZ3 569 aa13.03□□□□□ -0.32
PTN-202ENST00000393083 CXorf40BQ96DE9 158 aa13.03□□□□□ -0.32
PTN-202ENST00000393083 WDR34Q96EX3 536 aa13.03□□□□□ -0.32
PTN-202ENST00000393083 SLC38A3Q99624 504 aa13.03□□□□□ -0.32
PTN-202ENST00000393083 EFCAB11Q9BUY7 163 aa13.03□□□□□ -0.32
PTN-202ENST00000393083 ACAT2Q9BWD1 397 aa13.03□□□□□ -0.32
PTN-202ENST00000393083 TBC1D10AQ9BXI6 508 aa13.03□□□□□ -0.32
PTN-202ENST00000393083 PCBD2Q9H0N5 130 aa13.03□□□□□ -0.32
PTN-202ENST00000393083 EHD1Q9H4M9 534 aa13.03□□□□□ -0.32
PTN-202ENST00000393083 XKR8Q9H6D3 395 aa13.03□□□□□ -0.32
PTN-202ENST00000393083 KIR3DX1Q9H7L2 352 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms