RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 MAGEB10Q96LZ2 347 aaPredicted RBP15.71■□□□□ 0.1
PTPRK-208ENST00000392449 C5orf34Q96MH7 638 aa15.71■□□□□ 0.1
PTPRK-208ENST00000392449 LMF1Q96S06 567 aa15.71■□□□□ 0.1
PTPRK-208ENST00000392449 EBNA1BP2Q99848 306 aaKnown RBP15.71■□□□□ 0.1
PTPRK-208ENST00000392449 WDR83Q9BRX9 315 aaKnown RBP15.71■□□□□ 0.1
PTPRK-208ENST00000392449 VN1R1Q9GZP7 353 aa15.71■□□□□ 0.1
PTPRK-208ENST00000392449 OSGIN2Q9Y236 505 aa15.71■□□□□ 0.1
PTPRK-208ENST00000392449 CELSR2Q9HCU4 2923 aa15.7■□□□□ 0.1
PTPRK-208ENST00000392449 GOLGA6L10A0A0M3HER8 536 aa15.7■□□□□ 0.1
PTPRK-208ENST00000392449 A0A1W2PQ72 361 aa15.7■□□□□ 0.1
PTPRK-208ENST00000392449 SGK494L7N484 410 aa15.7■□□□□ 0.1
PTPRK-208ENST00000392449 DNALI1O14645 258 aaPredicted RBP15.7■□□□□ 0.1
PTPRK-208ENST00000392449 LCMT2O60294 686 aaKnown RBP15.7■□□□□ 0.1
PTPRK-208ENST00000392449 SEC24DO94855 1032 aaPredicted RBP15.7■□□□□ 0.1
PTPRK-208ENST00000392449 AHSGP02765 367 aa15.7■□□□□ 0.1
PTPRK-208ENST00000392449 SERPINA7P05543 415 aa15.7■□□□□ 0.1
PTPRK-208ENST00000392449 CDH1P12830 882 aa15.7■□□□□ 0.1
PTPRK-208ENST00000392449 ST13P50502 369 aaKnown RBP15.7■□□□□ 0.1
PTPRK-208ENST00000392449 MEF2AQ02078 507 aaPredicted RBP15.7■□□□□ 0.1
PTPRK-208ENST00000392449 RELAQ04206 551 aa15.7■□□□□ 0.1
PTPRK-208ENST00000392449 NAE1Q13564 534 aa15.7■□□□□ 0.1
PTPRK-208ENST00000392449 PTK6Q13882 451 aa15.7■□□□□ 0.1
PTPRK-208ENST00000392449 FAM53BQ14153 422 aa15.7■□□□□ 0.1
PTPRK-208ENST00000392449 BBS9Q3SYG4 887 aa15.7■□□□□ 0.1
PTPRK-208ENST00000392449 MFSD4BQ5TF39 518 aa15.7■□□□□ 0.1
PTPRK-208ENST00000392449 AGTRAPQ6RW13 159 aa15.7■□□□□ 0.1
PTPRK-208ENST00000392449 MAMDC2Q7Z304 686 aaPredicted RBP15.7■□□□□ 0.1
PTPRK-208ENST00000392449 KCT2Q8NC54 265 aa15.7■□□□□ 0.1
PTPRK-208ENST00000392449 MCOLN3Q8TDD5 553 aa15.7■□□□□ 0.1
PTPRK-208ENST00000392449 PYCR2Q96C36 320 aa15.7■□□□□ 0.1
PTPRK-208ENST00000392449 RBCK1Q9BYM8 510 aa15.7■□□□□ 0.1
PTPRK-208ENST00000392449 KCNF1Q9H3M0 494 aa15.7■□□□□ 0.1
PTPRK-208ENST00000392449 TMEM184CQ9NVA4 438 aa15.7■□□□□ 0.1
PTPRK-208ENST00000392449 DIDO1Q9BTC0 2240 aaKnown RBP15.69■□□□□ 0.1
PTPRK-208ENST00000392449 LOC102723996A0A087X1L8 192 aa15.69■□□□□ 0.1
PTPRK-208ENST00000392449 TXNDC9O14530 226 aa15.69■□□□□ 0.1
PTPRK-208ENST00000392449 TSPAN12O95859 305 aa15.69■□□□□ 0.1
PTPRK-208ENST00000392449 UQCRHP07919 91 aa15.69■□□□□ 0.1
PTPRK-208ENST00000392449 AVPR1BP47901 424 aa15.69■□□□□ 0.1
PTPRK-208ENST00000392449 RPS15AP62244 130 aaKnown RBP15.69■□□□□ 0.1
PTPRK-208ENST00000392449 NDUFA9Q16795 377 aa15.69■□□□□ 0.1
PTPRK-208ENST00000392449 MINDY4Q4G0A6 757 aa15.69■□□□□ 0.1
PTPRK-208ENST00000392449 TRMT10BQ6PF06 316 aaKnown RBP15.69■□□□□ 0.1
PTPRK-208ENST00000392449 TMEM205Q6UW68 189 aa15.69■□□□□ 0.1
PTPRK-208ENST00000392449 PDSS2Q86YH6 399 aa15.69■□□□□ 0.1
PTPRK-208ENST00000392449 CFAP36Q96G28 342 aa15.69■□□□□ 0.1
PTPRK-208ENST00000392449 TAAR6Q96RI8 345 aa15.69■□□□□ 0.1
PTPRK-208ENST00000392449 ZNF700Q9H0M5 742 aa15.69■□□□□ 0.1
PTPRK-208ENST00000392449 PARVBQ9HBI1 364 aa15.69■□□□□ 0.1
PTPRK-208ENST00000392449 RIC8BQ9NVN3 520 aa15.69■□□□□ 0.1
PTPRK-208ENST00000392449 TAS2R13Q9NYV9 303 aa15.69■□□□□ 0.1
PTPRK-208ENST00000392449 IKZF3Q9UKT9 509 aa15.69■□□□□ 0.1
PTPRK-208ENST00000392449 SCN2AQ99250 2005 aa15.69■□□□□ 0.1
PTPRK-208ENST00000392449 ZNF860A6NHJ4 632 aa15.68■□□□□ 0.1
PTPRK-208ENST00000392449 EIF3FO00303 357 aaPredicted RBP15.68■□□□□ 0.1
PTPRK-208ENST00000392449 LRRTM2O43300 516 aa15.68■□□□□ 0.1
PTPRK-208ENST00000392449 RDH16O75452 317 aa15.68■□□□□ 0.1
PTPRK-208ENST00000392449 WDPCPO95876 746 aa15.68■□□□□ 0.1
PTPRK-208ENST00000392449 C8GP07360 202 aa15.68■□□□□ 0.1
PTPRK-208ENST00000392449 C8orf89P0DMQ9 161 aa15.68■□□□□ 0.1
PTPRK-208ENST00000392449 IVDP26440 423 aa15.68■□□□□ 0.1
PTPRK-208ENST00000392449 RGS4P49798 205 aa15.68■□□□□ 0.1
PTPRK-208ENST00000392449 TNFSF10P50591 281 aa15.68■□□□□ 0.1
PTPRK-208ENST00000392449 SPANXN3Q5MJ09 141 aa15.68■□□□□ 0.1
PTPRK-208ENST00000392449 TMEM214Q6NUQ4 689 aaKnown RBP15.68■□□□□ 0.1
PTPRK-208ENST00000392449 UGT3A1Q6NUS8 523 aa15.68■□□□□ 0.1
PTPRK-208ENST00000392449 FAM180AQ6UWF9 173 aa15.68■□□□□ 0.1
PTPRK-208ENST00000392449 SLC26A11Q86WA9 606 aa15.68■□□□□ 0.1
PTPRK-208ENST00000392449 C17orf64Q86WR6 236 aa15.68■□□□□ 0.1
PTPRK-208ENST00000392449 CNTN4Q8IWV2 1026 aa15.68■□□□□ 0.1
PTPRK-208ENST00000392449 MYO1HQ8N1T3 1032 aa15.68■□□□□ 0.1
PTPRK-208ENST00000392449 GPATCH11Q8N954 259 aa15.68■□□□□ 0.1
PTPRK-208ENST00000392449 OR51Q1Q8NH59 317 aa15.68■□□□□ 0.1
PTPRK-208ENST00000392449 MOCOSQ96EN8 888 aa15.68■□□□□ 0.1
PTPRK-208ENST00000392449 CERS2Q96G23 380 aa15.68■□□□□ 0.1
PTPRK-208ENST00000392449 IMMP1LQ96LU5 166 aa15.68■□□□□ 0.1
PTPRK-208ENST00000392449 OLFM1Q99784 485 aa15.68■□□□□ 0.1
PTPRK-208ENST00000392449 PPANQ9NQ55 473 aaKnown RBP15.68■□□□□ 0.1
PTPRK-208ENST00000392449 CHMP2BQ9UQN3 213 aa15.68■□□□□ 0.1
PTPRK-208ENST00000392449 CACNA1DQ01668 2161 aa15.68■□□□□ 0.1
PTPRK-208ENST00000392449 ITPR2Q14571 2701 aa15.68■□□□□ 0.1
PTPRK-208ENST00000392449 KCNE1BA0A087WTH5 132 aa15.67■□□□□ 0.1
PTPRK-208ENST00000392449 DYTNA2CJ06 578 aa15.67■□□□□ 0.1
PTPRK-208ENST00000392449 USP27XA6NNY8 438 aa15.67■□□□□ 0.1
PTPRK-208ENST00000392449 CDC123O75794 336 aaPredicted RBP15.67■□□□□ 0.1
PTPRK-208ENST00000392449 WFS1O76024 890 aa15.67■□□□□ 0.1
PTPRK-208ENST00000392449 NSA2O95478 260 aaKnown RBP15.67■□□□□ 0.1
PTPRK-208ENST00000392449 B3GALT4O96024 378 aa15.67■□□□□ 0.1
PTPRK-208ENST00000392449 EDN3P14138 238 aa15.67■□□□□ 0.1
PTPRK-208ENST00000392449 NPPBP16860 134 aa15.67■□□□□ 0.1
PTPRK-208ENST00000392449 DCTP40126 519 aa15.67■□□□□ 0.1
PTPRK-208ENST00000392449 ELK3P41970 407 aa15.67■□□□□ 0.1
PTPRK-208ENST00000392449 XCR1P46094 333 aa15.67■□□□□ 0.1
PTPRK-208ENST00000392449 KCNK10P57789 538 aa15.67■□□□□ 0.1
PTPRK-208ENST00000392449 FCRLBQ6BAA4 426 aa15.67■□□□□ 0.1
PTPRK-208ENST00000392449 HIBCHQ6NVY1 386 aaPredicted RBP15.67■□□□□ 0.1
PTPRK-208ENST00000392449 KLHL7Q8IXQ5 586 aa15.67■□□□□ 0.1
PTPRK-208ENST00000392449 OR5T3Q8NGG3 340 aa15.67■□□□□ 0.1
PTPRK-208ENST00000392449 TM4SF19Q96DZ7 209 aa15.67■□□□□ 0.1
PTPRK-208ENST00000392449 CAPZA3Q96KX2 299 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms