RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 SRMSQ9H3Y6 488 aa11.71□□□□□ -0.53
SPTBN1-203ENST00000389980 PELI2Q9HAT8 420 aa11.71□□□□□ -0.53
SPTBN1-203ENST00000389980 SLC6A20Q9NP91 592 aa11.71□□□□□ -0.53
SPTBN1-203ENST00000389980 SLAMF8Q9P0V8 285 aa11.71□□□□□ -0.53
SPTBN1-203ENST00000389980 LRRC42Q9Y546 428 aa11.71□□□□□ -0.53
SPTBN1-203ENST00000389980 PCDHB11Q9Y5F2 797 aa11.71□□□□□ -0.53
SPTBN1-203ENST00000389980 A0A1W2PP18 115 aa11.71□□□□□ -0.54
SPTBN1-203ENST00000389980 ISM1B1AKI9 464 aa11.71□□□□□ -0.54
SPTBN1-203ENST00000389980 NPIPB8E9PQR5 432 aa11.71□□□□□ -0.54
SPTBN1-203ENST00000389980 PSMG1O95456 288 aa11.71□□□□□ -0.54
SPTBN1-203ENST00000389980 VIPP01282 170 aa11.71□□□□□ -0.54
SPTBN1-203ENST00000389980 STATHP02808 62 aa11.71□□□□□ -0.54
SPTBN1-203ENST00000389980 CHRM5P08912 532 aaPredicted RBP11.71□□□□□ -0.54
SPTBN1-203ENST00000389980 JAK1P23458 1154 aa11.71□□□□□ -0.54
SPTBN1-203ENST00000389980 NDUFS1P28331 727 aa11.71□□□□□ -0.54
SPTBN1-203ENST00000389980 CSNK1G2P78368 415 aa11.71□□□□□ -0.54
SPTBN1-203ENST00000389980 RAE1P78406 368 aaKnown RBP11.71□□□□□ -0.54
SPTBN1-203ENST00000389980 SIGLEC14Q08ET2 396 aa11.71□□□□□ -0.54
SPTBN1-203ENST00000389980 TLR1Q15399 786 aa11.71□□□□□ -0.54
SPTBN1-203ENST00000389980 FAM174BQ3ZCQ3 159 aa11.71□□□□□ -0.54
SPTBN1-203ENST00000389980 PGM2L1Q6PCE3 622 aa11.71□□□□□ -0.54
SPTBN1-203ENST00000389980 SLC2A7Q6PXP3 512 aa11.71□□□□□ -0.54
SPTBN1-203ENST00000389980 SLC36A4Q6YBV0 504 aa11.71□□□□□ -0.54
SPTBN1-203ENST00000389980 BNC2Q6ZN30 1099 aaPredicted RBP11.71□□□□□ -0.54
SPTBN1-203ENST00000389980 ADGRF3Q8IZF5 1079 aa11.71□□□□□ -0.54
SPTBN1-203ENST00000389980 KRT78Q8N1N4 520 aa11.71□□□□□ -0.54
SPTBN1-203ENST00000389980 SLC37A2Q8TED4 501 aa11.71□□□□□ -0.54
SPTBN1-203ENST00000389980 DTNBP1Q96EV8 351 aa11.71□□□□□ -0.54
SPTBN1-203ENST00000389980 AIF1LQ9BQI0 150 aa11.71□□□□□ -0.54
SPTBN1-203ENST00000389980 PCED1AQ9H1Q7 454 aa11.71□□□□□ -0.54
SPTBN1-203ENST00000389980 MRPS30Q9NP92 439 aaKnown RBP11.71□□□□□ -0.54
SPTBN1-203ENST00000389980 ASIC5Q9NY37 505 aa11.71□□□□□ -0.54
SPTBN1-203ENST00000389980 CPNE7Q9UBL6 633 aa11.71□□□□□ -0.54
SPTBN1-203ENST00000389980 BBIP1A8MTZ0 92 aa11.7□□□□□ -0.54
SPTBN1-203ENST00000389980 B4DGG1 531 aa11.7□□□□□ -0.54
SPTBN1-203ENST00000389980 AKAP10O43572 662 aa11.7□□□□□ -0.54
SPTBN1-203ENST00000389980 CIB2O75838 187 aa11.7□□□□□ -0.54
SPTBN1-203ENST00000389980 TBX6O95947 436 aaPredicted RBP11.7□□□□□ -0.54
SPTBN1-203ENST00000389980 CSF2P04141 144 aa11.7□□□□□ -0.54
SPTBN1-203ENST00000389980 HSD3B1P14060 373 aa11.7□□□□□ -0.54
SPTBN1-203ENST00000389980 TCN1P20061 433 aaPredicted RBP11.7□□□□□ -0.54
SPTBN1-203ENST00000389980 HSD3B2P26439 372 aa11.7□□□□□ -0.54
SPTBN1-203ENST00000389980 SHMT2P34897 504 aa11.7□□□□□ -0.54
SPTBN1-203ENST00000389980 BLKP51451 505 aa11.7□□□□□ -0.54
SPTBN1-203ENST00000389980 ZNF33BQ06732 778 aa11.7□□□□□ -0.54
SPTBN1-203ENST00000389980 CEACAM7Q14002 265 aa11.7□□□□□ -0.54
SPTBN1-203ENST00000389980 CCDC6Q16204 474 aa11.7□□□□□ -0.54
SPTBN1-203ENST00000389980 SPANXN4Q5MJ08 99 aa11.7□□□□□ -0.54
SPTBN1-203ENST00000389980 C1orf146Q5VVC0 180 aa11.7□□□□□ -0.54
SPTBN1-203ENST00000389980 KIAA1614Q5VZ46 1190 aa11.7□□□□□ -0.54
SPTBN1-203ENST00000389980 TRIM73Q86UV7 250 aa11.7□□□□□ -0.54
SPTBN1-203ENST00000389980 HOMEZQ8IX15 550 aa11.7□□□□□ -0.54
SPTBN1-203ENST00000389980 GALNT15Q8N3T1 639 aa11.7□□□□□ -0.54
SPTBN1-203ENST00000389980 FBXW8Q8N3Y1 598 aa11.7□□□□□ -0.54
SPTBN1-203ENST00000389980 ENDOVQ8N8Q3 282 aaKnown RBP11.7□□□□□ -0.54
SPTBN1-203ENST00000389980 PCYOX1LQ8NBM8 494 aa11.7□□□□□ -0.54
SPTBN1-203ENST00000389980 FAM156AQ8NDB6 213 aa11.7□□□□□ -0.54
SPTBN1-203ENST00000389980 OR2L3Q8NG85 312 aa11.7□□□□□ -0.54
SPTBN1-203ENST00000389980 OR4K1Q8NGD4 311 aa11.7□□□□□ -0.54
SPTBN1-203ENST00000389980 OR10G6Q8NH81 332 aa11.7□□□□□ -0.54
SPTBN1-203ENST00000389980 CHTF18Q8WVB6 975 aa11.7□□□□□ -0.54
SPTBN1-203ENST00000389980 STMN2Q93045 179 aa11.7□□□□□ -0.54
SPTBN1-203ENST00000389980 TSC22D3Q99576 134 aa11.7□□□□□ -0.54
SPTBN1-203ENST00000389980 DPH7Q9BTV6 452 aa11.7□□□□□ -0.54
SPTBN1-203ENST00000389980 SORBS1Q9BX66 1292 aaKnown RBP11.7□□□□□ -0.54
SPTBN1-203ENST00000389980 DCLRE1BQ9H816 532 aa11.7□□□□□ -0.54
SPTBN1-203ENST00000389980 ADA2Q9NZK5 511 aa11.7□□□□□ -0.54
SPTBN1-203ENST00000389980 GMPR2Q9P2T1 348 aaKnown RBP11.7□□□□□ -0.54
SPTBN1-203ENST00000389980 CROTQ9UKG9 612 aa11.7□□□□□ -0.54
SPTBN1-203ENST00000389980 TMED5Q9Y3A6 229 aa11.7□□□□□ -0.54
SPTBN1-203ENST00000389980 CACNA1EQ15878 2313 aa11.7□□□□□ -0.54
SPTBN1-203ENST00000389980 EME2A4GXA9 379 aaPredicted RBP11.69□□□□□ -0.54
SPTBN1-203ENST00000389980 PDLIM1O00151 329 aa11.69□□□□□ -0.54
SPTBN1-203ENST00000389980 FXYD1O00168 92 aa11.69□□□□□ -0.54
SPTBN1-203ENST00000389980 FOXE1O00358 373 aaPredicted RBP11.69□□□□□ -0.54
SPTBN1-203ENST00000389980 OR1F1O43749 312 aa11.69□□□□□ -0.54
SPTBN1-203ENST00000389980 SDC3O75056 442 aa11.69□□□□□ -0.54
SPTBN1-203ENST00000389980 B3GALT4O96024 378 aa11.69□□□□□ -0.54
SPTBN1-203ENST00000389980 NME1P15531 152 aaKnown RBP11.69□□□□□ -0.54
SPTBN1-203ENST00000389980 PTDSS1P48651 473 aaKnown RBP11.69□□□□□ -0.54
SPTBN1-203ENST00000389980 MTTPP55157 894 aa11.69□□□□□ -0.54
SPTBN1-203ENST00000389980 REEP5Q00765 189 aa11.69□□□□□ -0.54
SPTBN1-203ENST00000389980 DCP2Q8IU60 420 aaKnown RBP11.69□□□□□ -0.54
SPTBN1-203ENST00000389980 WDR48Q8TAF3 677 aa11.69□□□□□ -0.54
SPTBN1-203ENST00000389980 FAM174AQ8TBP5 190 aa11.69□□□□□ -0.54
SPTBN1-203ENST00000389980 LMX1AQ8TE12 382 aa11.69□□□□□ -0.54
SPTBN1-203ENST00000389980 ZDHHC1Q8WTX9 485 aa11.69□□□□□ -0.54
SPTBN1-203ENST00000389980 C11orf24Q96F05 449 aaPredicted RBP11.69□□□□□ -0.54
SPTBN1-203ENST00000389980 NAF1Q96HR8 494 aaKnown RBP11.69□□□□□ -0.54
SPTBN1-203ENST00000389980 MACROD1Q9BQ69 325 aa11.69□□□□□ -0.54
SPTBN1-203ENST00000389980 PAPOLBQ9NRJ5 636 aaKnown RBP11.69□□□□□ -0.54
SPTBN1-203ENST00000389980 OR6C2Q9NZP2 312 aa11.69□□□□□ -0.54
SPTBN1-203ENST00000389980 PPT2Q9UMR5 302 aa11.69□□□□□ -0.54
SPTBN1-203ENST00000389980 OR6C74A6NCV1 312 aa11.69□□□□□ -0.54
SPTBN1-203ENST00000389980 ANKDD1BA6NHY2 528 aa11.69□□□□□ -0.54
SPTBN1-203ENST00000389980 HAT1O14929 419 aa11.69□□□□□ -0.54
SPTBN1-203ENST00000389980 KDM1AO60341 852 aa11.69□□□□□ -0.54
SPTBN1-203ENST00000389980 EEDO75530 441 aaKnown RBP11.69□□□□□ -0.54
SPTBN1-203ENST00000389980 SERPIND1P05546 499 aa11.69□□□□□ -0.54
SPTBN1-203ENST00000389980 PRPS2P11908 318 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms