RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 HEPACAMQ14CZ8 416 aa12.74□□□□□ -0.37
TRAPPC9-201ENST00000389328 SF3B4Q15427 424 aaKnown RBP eCLIP12.74□□□□□ -0.37
TRAPPC9-201ENST00000389328 CLEC12AQ5QGZ9 265 aa12.74□□□□□ -0.37
TRAPPC9-201ENST00000389328 PNCKQ6P2M8 343 aa12.74□□□□□ -0.37
TRAPPC9-201ENST00000389328 MAL2Q969L2 176 aa12.74□□□□□ -0.37
TRAPPC9-201ENST00000389328 FUBP3Q96I24 572 aaKnown RBP eCLIP12.74□□□□□ -0.37
TRAPPC9-201ENST00000389328 FAM129BQ96TA1 746 aa12.74□□□□□ -0.37
TRAPPC9-201ENST00000389328 A0A1W2PRB8 838 aa12.74□□□□□ -0.37
TRAPPC9-201ENST00000389328 ARHGEF33A8MVX0 844 aa12.74□□□□□ -0.37
TRAPPC9-201ENST00000389328 CKBP12277 381 aa12.74□□□□□ -0.37
TRAPPC9-201ENST00000389328 ZNF24P17028 368 aa12.74□□□□□ -0.37
TRAPPC9-201ENST00000389328 AKR1D1P51857 326 aa12.74□□□□□ -0.37
TRAPPC9-201ENST00000389328 MTSS1LQ765P7 747 aa12.74□□□□□ -0.37
TRAPPC9-201ENST00000389328 FAM86B1Q8N7N1 296 aa12.74□□□□□ -0.37
TRAPPC9-201ENST00000389328 SLC37A3Q8NCC5 494 aa12.74□□□□□ -0.37
TRAPPC9-201ENST00000389328 SUSD3Q96L08 255 aa12.74□□□□□ -0.37
TRAPPC9-201ENST00000389328 C1orf74Q96LT6 269 aa12.74□□□□□ -0.37
TRAPPC9-201ENST00000389328 QRFPRQ96P65 431 aa12.74□□□□□ -0.37
TRAPPC9-201ENST00000389328 R3HDMLQ9H3Y0 253 aa12.74□□□□□ -0.37
TRAPPC9-201ENST00000389328 DCAF13Q9NV06 445 aaKnown RBP12.74□□□□□ -0.37
TRAPPC9-201ENST00000389328 CMAHPQ9Y471 501 aa12.74□□□□□ -0.37
TRAPPC9-201ENST00000389328 SCN7AQ01118 1682 aa12.74□□□□□ -0.37
TRAPPC9-201ENST00000389328 MAST2Q6P0Q8 1798 aa12.74□□□□□ -0.37
TRAPPC9-201ENST00000389328 HOXA2O43364 376 aa12.74□□□□□ -0.37
TRAPPC9-201ENST00000389328 BMP7P18075 431 aa12.74□□□□□ -0.37
TRAPPC9-201ENST00000389328 ARNTP27540 789 aa12.74□□□□□ -0.37
TRAPPC9-201ENST00000389328 CA5AP35218 305 aa12.74□□□□□ -0.37
TRAPPC9-201ENST00000389328 MAPK12P53778 367 aa12.74□□□□□ -0.37
TRAPPC9-201ENST00000389328 EMP3P54852 163 aa12.74□□□□□ -0.37
TRAPPC9-201ENST00000389328 CRB2Q5IJ48 1285 aa12.74□□□□□ -0.37
TRAPPC9-201ENST00000389328 CXXC5Q7LFL8 322 aaKnown RBP12.74□□□□□ -0.37
TRAPPC9-201ENST00000389328 TICAM1Q8IUC6 712 aa12.74□□□□□ -0.37
TRAPPC9-201ENST00000389328 CLECL1Q8IZS7 167 aa12.74□□□□□ -0.37
TRAPPC9-201ENST00000389328 OR52L1Q8NGH7 329 aa12.74□□□□□ -0.37
TRAPPC9-201ENST00000389328 GEMIN6Q8WXD5 167 aaKnown RBP12.74□□□□□ -0.37
TRAPPC9-201ENST00000389328 HCN4Q9Y3Q4 1203 aa12.74□□□□□ -0.37
TRAPPC9-201ENST00000389328 DNMT3AQ9Y6K1 912 aaPredicted RBP12.74□□□□□ -0.37
TRAPPC9-201ENST00000389328 AP3D1O14617 1153 aa12.73□□□□□ -0.37
TRAPPC9-201ENST00000389328 OR5F1O95221 314 aa12.73□□□□□ -0.37
TRAPPC9-201ENST00000389328 HNRNPFP52597 415 aaKnown RBP12.73□□□□□ -0.37
TRAPPC9-201ENST00000389328 ADARB1P78563 741 aaKnown RBP12.73□□□□□ -0.37
TRAPPC9-201ENST00000389328 LGALS3BPQ08380 585 aa12.73□□□□□ -0.37
TRAPPC9-201ENST00000389328 GRSF1Q12849 480 aaKnown RBP eCLIP12.73□□□□□ -0.37
TRAPPC9-201ENST00000389328 NFE2L1Q14494 772 aa12.73□□□□□ -0.37
TRAPPC9-201ENST00000389328 EXOC3L2Q2M3D2 409 aa12.73□□□□□ -0.37
TRAPPC9-201ENST00000389328 ZNF691Q5VV52 312 aa12.73□□□□□ -0.37
TRAPPC9-201ENST00000389328 PRR23CQ6ZRP0 262 aa12.73□□□□□ -0.37
TRAPPC9-201ENST00000389328 LRRTM3Q86VH5 581 aa12.73□□□□□ -0.37
TRAPPC9-201ENST00000389328 SLC22A15Q8IZD6 547 aa12.73□□□□□ -0.37
TRAPPC9-201ENST00000389328 PEX13Q92968 403 aa12.73□□□□□ -0.37
TRAPPC9-201ENST00000389328 ZNF717Q9BY31 904 aaPredicted RBP12.73□□□□□ -0.37
TRAPPC9-201ENST00000389328 TUBB1Q9H4B7 451 aa12.73□□□□□ -0.37
TRAPPC9-201ENST00000389328 FAM83DQ9H4H8 585 aa12.73□□□□□ -0.37
TRAPPC9-201ENST00000389328 MAGIXQ9H6Y5 334 aa12.73□□□□□ -0.37
TRAPPC9-201ENST00000389328 ACOT13Q9NPJ3 140 aa12.73□□□□□ -0.37
TRAPPC9-201ENST00000389328 MAN2B2Q9Y2E5 1009 aa12.73□□□□□ -0.37
TRAPPC9-201ENST00000389328 IFT52Q9Y366 437 aa12.73□□□□□ -0.37
TRAPPC9-201ENST00000389328 FAM47E-STBD1D6RA91 191 aa12.73□□□□□ -0.37
TRAPPC9-201ENST00000389328 EFCAB14O75071 495 aa12.73□□□□□ -0.37
TRAPPC9-201ENST00000389328 ADAM23O75077 832 aa12.73□□□□□ -0.37
TRAPPC9-201ENST00000389328 F2P00734 622 aa12.73□□□□□ -0.37
TRAPPC9-201ENST00000389328 RPS3P23396 243 aaKnown RBP eCLIP12.73□□□□□ -0.37
TRAPPC9-201ENST00000389328 HTR2BP41595 481 aa12.73□□□□□ -0.37
TRAPPC9-201ENST00000389328 AFF1P51825 1210 aaKnown RBP12.73□□□□□ -0.37
TRAPPC9-201ENST00000389328 FCGRTP55899 365 aa12.73□□□□□ -0.37
TRAPPC9-201ENST00000389328 PPIGQ13427 754 aaKnown RBP eCLIP12.73□□□□□ -0.373e-6■■□□□ 12.1
TRAPPC9-201ENST00000389328 MAD2L1BPQ15013 274 aaPredicted RBP12.73□□□□□ -0.37
TRAPPC9-201ENST00000389328 TCEA2Q15560 299 aa12.73□□□□□ -0.37
TRAPPC9-201ENST00000389328 PROX2Q3B8N5 592 aa12.73□□□□□ -0.37
TRAPPC9-201ENST00000389328 RAET1GQ6H3X3 334 aa12.73□□□□□ -0.37
TRAPPC9-201ENST00000389328 PRSS55Q6UWB4 352 aaPredicted RBP12.73□□□□□ -0.37
TRAPPC9-201ENST00000389328 FAM92BQ6ZTR7 304 aa12.73□□□□□ -0.37
TRAPPC9-201ENST00000389328 NPAS3Q8IXF0 933 aa12.73□□□□□ -0.37
TRAPPC9-201ENST00000389328 SLC5A8Q8N695 610 aa12.73□□□□□ -0.37
TRAPPC9-201ENST00000389328 TRPV1Q8NER1 839 aa12.73□□□□□ -0.37
TRAPPC9-201ENST00000389328 USP7Q93009 1102 aa12.73□□□□□ -0.37
TRAPPC9-201ENST00000389328 CMTM7Q96FZ5 175 aa12.73□□□□□ -0.37
TRAPPC9-201ENST00000389328 PSKH2Q96QS6 385 aa12.73□□□□□ -0.37
TRAPPC9-201ENST00000389328 TMEM138Q9NPI0 162 aa12.73□□□□□ -0.37
TRAPPC9-201ENST00000389328 GPRC5BQ9NZH0 403 aa12.73□□□□□ -0.37
TRAPPC9-201ENST00000389328 ABCD2Q9UBJ2 740 aa12.73□□□□□ -0.37
TRAPPC9-201ENST00000389328 NUFIP1Q9UHK0 495 aaKnown RBP12.73□□□□□ -0.37
TRAPPC9-201ENST00000389328 RETP07949 1114 aa12.73□□□□□ -0.37
TRAPPC9-201ENST00000389328 HRH2P25021 359 aa12.73□□□□□ -0.37
TRAPPC9-201ENST00000389328 ADPRMQ3LIE5 342 aa12.73□□□□□ -0.37
TRAPPC9-201ENST00000389328 AGAP7PQ5VUJ5 663 aa12.73□□□□□ -0.37
TRAPPC9-201ENST00000389328 ANKRD34AQ69YU3 496 aa12.73□□□□□ -0.37
TRAPPC9-201ENST00000389328 KIAA1161Q6NSJ0 714 aa12.73□□□□□ -0.37
TRAPPC9-201ENST00000389328 AMIGO1Q86WK6 493 aa12.73□□□□□ -0.37
TRAPPC9-201ENST00000389328 ZNF583Q96ND8 569 aa12.73□□□□□ -0.37
TRAPPC9-201ENST00000389328 MMP28Q9H239 520 aa12.73□□□□□ -0.37
TRAPPC9-201ENST00000389328 FAM120CQ9NX05 1096 aaKnown RBP12.73□□□□□ -0.37
TRAPPC9-201ENST00000389328 DLGAP1O14490 977 aa12.72□□□□□ -0.37
TRAPPC9-201ENST00000389328 CSKP41240 450 aa12.72□□□□□ -0.37
TRAPPC9-201ENST00000389328 MAB21L1Q13394 359 aa12.72□□□□□ -0.37
TRAPPC9-201ENST00000389328 SEMA3AQ14563 771 aa12.72□□□□□ -0.37
TRAPPC9-201ENST00000389328 CCL14Q16627 93 aa12.72□□□□□ -0.37
TRAPPC9-201ENST00000389328 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.72□□□□□ -0.37
TRAPPC9-201ENST00000389328 TMEM207Q6UWW9 146 aa12.72□□□□□ -0.37
TRAPPC9-201ENST00000389328 Q6ZPB1 254 aaPredicted RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms