RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 MTF2Q9Y483 593 aaPredicted RBP0.32□□□□□ -2.36
SNORD28-201ENST00000384706 SESN1Q9Y6P5 492 aa0.32□□□□□ -2.36
SNORD28-201ENST00000384706 DHX57Q6P158 1386 aaKnown RBP0.32□□□□□ -2.36
SNORD28-201ENST00000384706 PTCH1Q13635 1447 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 CDC42BPBQ9Y5S2 1711 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 IGKV1D-17A0A075B6S4 117 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 TEX48A0A1B0GUV7 120 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 hCG_38984A0A1B0GV85 526 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 A0A1W2PR77 199 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 NEMP2A6NFY4 417 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 TMEM221A6NGB7 291 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 ZSCAN5CA6NGD5 496 aaPredicted RBP0.31□□□□□ -2.36
SNORD28-201ENST00000384706 IGLON5A6NGN9 336 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 LIPT2A6NK58 231 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 INPP4BO15327 924 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 MAGEB2O15479 319 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 LRRTM2O43300 516 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 TNFSF12O43508 249 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 CYTIPO60759 359 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 SAP30O75446 220 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 CA11O75493 328 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 RNASEH2AO75792 299 aaKnown RBP0.31□□□□□ -2.36
SNORD28-201ENST00000384706 IGHV2-70P01814 119 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 CLEC3BP05452 202 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 RB1P06400 928 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 HSPA1AP0DMV8 641 aaKnown RBP0.31□□□□□ -2.36
SNORD28-201ENST00000384706 HSPA1BP0DMV9 641 aaKnown RBP0.31□□□□□ -2.36
SNORD28-201ENST00000384706 HAPLN1P10915 354 aaPredicted RBP0.31□□□□□ -2.36
SNORD28-201ENST00000384706 VPREB1P12018 145 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 IRF2P14316 349 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 GABRB1P18505 474 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 DNASE1P24855 282 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 EDNRAP25101 427 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 CD27P26842 260 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 GDF1P27539 372 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 PRKAR2BP31323 418 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 SPRP35270 261 aaPredicted RBP0.31□□□□□ -2.36
SNORD28-201ENST00000384706 HMGCLP35914 325 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 CETN2P41208 172 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 BRCC3P46736 316 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 VAMP7P51809 220 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 MAPK12P53778 367 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 ADARP55265 1226 aaKnown RBP0.31□□□□□ -2.36
SNORD28-201ENST00000384706 CDH8P55286 799 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 KRTAP12-4P60329 112 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 BTG1P62324 171 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 SIRPAP78324 504 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 MAT1AQ00266 395 aaKnown RBP0.31□□□□□ -2.36
SNORD28-201ENST00000384706 PRKCEQ02156 737 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 ZNF33BQ06732 778 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 VEZF1Q14119 521 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 GCKRQ14397 625 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 OPCMLQ14982 345 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 ABRAXAS2Q15018 415 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 KIAA0040Q15053 153 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 KNOP1Q1ED39 458 aaKnown RBP0.31□□□□□ -2.36
SNORD28-201ENST00000384706 TMEM266Q2M3C6 531 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 FAM106AQ4KMX7 169 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 FGD3Q5JSP0 725 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 RNASEH2BQ5TBB1 312 aaKnown RBP0.31□□□□□ -2.36
SNORD28-201ENST00000384706 ATP1A1-AS1Q5TC04 95 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 ZNF691Q5VV52 312 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 OR4C11Q6IEV9 310 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 OR4A47Q6IF82 309 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 CYB5D1Q6P9G0 228 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 CTR9Q6PD62 1173 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 SARM1Q6SZW1 724 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 ZNF600Q6ZNG1 722 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 CHST9Q7L1S5 443 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 MCM10Q7L590 875 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 NUP54Q7Z3B4 507 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 ZNF589Q86UQ0 364 aaPredicted RBP0.31□□□□□ -2.36
SNORD28-201ENST00000384706 AACSQ86V21 672 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 CARM1Q86X55 608 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 FBXO16Q8IX29 292 aaPredicted RBP0.31□□□□□ -2.36
SNORD28-201ENST00000384706 H1FOOQ8IZA3 346 aaPredicted RBP0.31□□□□□ -2.36
SNORD28-201ENST00000384706 SLC22A15Q8IZD6 547 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 RNF175Q8N4F7 328 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 CARNMT1Q8N4J0 409 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 GBP7Q8N8V2 638 aaPredicted RBP0.31□□□□□ -2.36
SNORD28-201ENST00000384706 ANKRD42Q8N9B4 389 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 BANPQ8N9N5 519 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 NOA1Q8NC60 698 aaKnown RBP0.31□□□□□ -2.36
SNORD28-201ENST00000384706 ZNF540Q8NDQ6 660 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 OR9Q2Q8NGE9 314 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 OR10Q1Q8NGQ4 319 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 OR6F1Q8NGZ6 308 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 ZNF564Q8TBZ8 553 aaPredicted RBP0.31□□□□□ -2.36
SNORD28-201ENST00000384706 FRAT1Q92837 279 aaPredicted RBP0.31□□□□□ -2.36
SNORD28-201ENST00000384706 LRRC59Q96AG4 307 aaKnown RBP0.31□□□□□ -2.36
SNORD28-201ENST00000384706 SLCO4A1Q96BD0 722 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 ELSPBP1Q96BH3 223 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 HDAC11Q96DB2 347 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 NXPE2Q96DL1 559 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 FAM71F1Q96KD3 344 aaPredicted RBP0.31□□□□□ -2.36
SNORD28-201ENST00000384706 RUNDC3BQ96NL0 473 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 SCLT1Q96NL6 688 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 ANKRD27Q96NW4 1050 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 SIGLEC12Q96PQ1 595 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 NEDD4LQ96PU5 975 aa0.31□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms