RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 NPRL3Q12980 569 aa4.87□□□□□ -1.63
RNU6-40P-201ENST00000384254 TRIM29Q14134 588 aa4.87□□□□□ -1.63
RNU6-40P-201ENST00000384254 P2RY6Q15077 328 aa4.87□□□□□ -1.63
RNU6-40P-201ENST00000384254 GPR33Q49SQ1 333 aa4.87□□□□□ -1.63
RNU6-40P-201ENST00000384254 SLC39A12Q504Y0 691 aa4.87□□□□□ -1.63
RNU6-40P-201ENST00000384254 XKR3Q5GH77 459 aa4.87□□□□□ -1.63
RNU6-40P-201ENST00000384254 SLC25A53Q5H9E4 307 aa4.87□□□□□ -1.63
RNU6-40P-201ENST00000384254 GBP7Q8N8V2 638 aaPredicted RBP4.87□□□□□ -1.63
RNU6-40P-201ENST00000384254 AMER3Q8N944 861 aa4.87□□□□□ -1.63
RNU6-40P-201ENST00000384254 OR4C3Q8NH37 302 aa4.87□□□□□ -1.63
RNU6-40P-201ENST00000384254 CFAP36Q96G28 342 aa4.87□□□□□ -1.63
RNU6-40P-201ENST00000384254 PANX3Q96QZ0 392 aa4.87□□□□□ -1.63
RNU6-40P-201ENST00000384254 GPR173Q9NS66 373 aa4.87□□□□□ -1.63
RNU6-40P-201ENST00000384254 INTS9Q9NV88 658 aaKnown RBP4.87□□□□□ -1.63
RNU6-40P-201ENST00000384254 MOSPD1Q9UJG1 213 aa4.87□□□□□ -1.63
RNU6-40P-201ENST00000384254 TNFRSF18Q9Y5U5 241 aa4.87□□□□□ -1.63
RNU6-40P-201ENST00000384254 STK36Q9NRP7 1315 aa4.87□□□□□ -1.63
RNU6-40P-201ENST00000384254 A0A0U1RQG5 324 aaPredicted RBP4.86□□□□□ -1.63
RNU6-40P-201ENST00000384254 CCL24O00175 119 aa4.86□□□□□ -1.63
RNU6-40P-201ENST00000384254 FPGTO14772 594 aa4.86□□□□□ -1.63
RNU6-40P-201ENST00000384254 PGRMC2O15173 223 aa4.86□□□□□ -1.63
RNU6-40P-201ENST00000384254 TRMUO75648 421 aaKnown RBP4.86□□□□□ -1.63
RNU6-40P-201ENST00000384254 KRT33AO76009 404 aa4.86□□□□□ -1.63
RNU6-40P-201ENST00000384254 NGFP01138 241 aa4.86□□□□□ -1.63
RNU6-40P-201ENST00000384254 HMOX1P09601 288 aa4.86□□□□□ -1.63
RNU6-40P-201ENST00000384254 P4HA1P13674 534 aa4.86□□□□□ -1.63
RNU6-40P-201ENST00000384254 VCLP18206 1134 aa4.86□□□□□ -1.63
RNU6-40P-201ENST00000384254 C17orf67Q0P5P2 114 aa4.86□□□□□ -1.63
RNU6-40P-201ENST00000384254 RBM39Q14498 530 aaKnown RBP4.86□□□□□ -1.63
RNU6-40P-201ENST00000384254 PPA1Q15181 289 aa4.86□□□□□ -1.63
RNU6-40P-201ENST00000384254 ZNF542PQ5EBM4 170 aa4.86□□□□□ -1.63
RNU6-40P-201ENST00000384254 XKR6Q5GH73 641 aa4.86□□□□□ -1.63
RNU6-40P-201ENST00000384254 ARMCX4Q5H9R4 360 aa4.86□□□□□ -1.63
RNU6-40P-201ENST00000384254 FAM76BQ5HYJ3 339 aa4.86□□□□□ -1.63
RNU6-40P-201ENST00000384254 TMEM207Q6UWW9 146 aa4.86□□□□□ -1.63
RNU6-40P-201ENST00000384254 NHLRC1Q6VVB1 395 aa4.86□□□□□ -1.63
RNU6-40P-201ENST00000384254 MACC1Q6ZN28 852 aa4.86□□□□□ -1.63
RNU6-40P-201ENST00000384254 SLC24A5Q71RS6 500 aa4.86□□□□□ -1.63
RNU6-40P-201ENST00000384254 FCRLAQ7L513 359 aa4.86□□□□□ -1.63
RNU6-40P-201ENST00000384254 DCUN1D3Q8IWE4 304 aa4.86□□□□□ -1.63
RNU6-40P-201ENST00000384254 LRTM2Q8N967 370 aa4.86□□□□□ -1.63
RNU6-40P-201ENST00000384254 NAT8LQ8N9F0 302 aa4.86□□□□□ -1.63
RNU6-40P-201ENST00000384254 ST7LQ8TDW4 575 aa4.86□□□□□ -1.63
RNU6-40P-201ENST00000384254 HPSE2Q8WWQ2 592 aa4.86□□□□□ -1.63
RNU6-40P-201ENST00000384254 DYRK2Q92630 601 aa4.86□□□□□ -1.63
RNU6-40P-201ENST00000384254 LMLNQ96KR4 655 aa4.86□□□□□ -1.63
RNU6-40P-201ENST00000384254 CTAGE1Q96RT6 745 aa4.86□□□□□ -1.63
RNU6-40P-201ENST00000384254 LPAR4Q99677 370 aa4.86□□□□□ -1.63
RNU6-40P-201ENST00000384254 ALKBH7Q9BT30 221 aaPredicted RBP4.86□□□□□ -1.63
RNU6-40P-201ENST00000384254 NYXQ9GZU5 481 aa4.86□□□□□ -1.63
RNU6-40P-201ENST00000384254 SHARPINQ9H0F6 387 aa4.86□□□□□ -1.63
RNU6-40P-201ENST00000384254 RAVER2Q9HCJ3 691 aaKnown RBP4.86□□□□□ -1.63
RNU6-40P-201ENST00000384254 SLC52A3Q9NQ40 469 aa4.86□□□□□ -1.63
RNU6-40P-201ENST00000384254 NCKAP1Q9Y2A7 1128 aa4.86□□□□□ -1.63
RNU6-40P-201ENST00000384254 TRBV5-5A0A0J9YX44 114 aa4.85□□□□□ -1.63
RNU6-40P-201ENST00000384254 C2orf92A0A1B0GVN3 265 aa4.85□□□□□ -1.63
RNU6-40P-201ENST00000384254 BLOC1S5-TXNDC5H3BN57 136 aa4.85□□□□□ -1.63
RNU6-40P-201ENST00000384254 GRAP2O75791 330 aa4.85□□□□□ -1.63
RNU6-40P-201ENST00000384254 CDC123O75794 336 aaPredicted RBP4.85□□□□□ -1.63
RNU6-40P-201ENST00000384254 LETM1O95202 739 aaPredicted RBP4.85□□□□□ -1.63
RNU6-40P-201ENST00000384254 EML2O95834 649 aa4.85□□□□□ -1.63
RNU6-40P-201ENST00000384254 IGLV2-11P01706 119 aa4.85□□□□□ -1.63
RNU6-40P-201ENST00000384254 HMBSP08397 361 aa4.85□□□□□ -1.63
RNU6-40P-201ENST00000384254 OR3A1P47881 315 aa4.85□□□□□ -1.63
RNU6-40P-201ENST00000384254 NT5C2P49902 561 aa4.85□□□□□ -1.63
RNU6-40P-201ENST00000384254 SLC34A1Q06495 639 aa4.85□□□□□ -1.63
RNU6-40P-201ENST00000384254 CBX3Q13185 183 aa4.85□□□□□ -1.63
RNU6-40P-201ENST00000384254 RPS6KA1Q15418 735 aa4.85□□□□□ -1.63
RNU6-40P-201ENST00000384254 PM20D1Q6GTS8 502 aa4.85□□□□□ -1.63
RNU6-40P-201ENST00000384254 ETFRF1Q6IPR1 90 aa4.85□□□□□ -1.63
RNU6-40P-201ENST00000384254 SMIM29Q86T20 159 aa4.85□□□□□ -1.63
RNU6-40P-201ENST00000384254 NR2C2APQ86WQ0 139 aa4.85□□□□□ -1.63
RNU6-40P-201ENST00000384254 ZNF843Q8N446 348 aa4.85□□□□□ -1.63
RNU6-40P-201ENST00000384254 FAM89BQ8N5H3 189 aa4.85□□□□□ -1.63
RNU6-40P-201ENST00000384254 C9orf106Q8NAJ2 232 aa4.85□□□□□ -1.63
RNU6-40P-201ENST00000384254 SNX21Q969T3 373 aa4.85□□□□□ -1.63
RNU6-40P-201ENST00000384254 EEF2KMTQ96G04 330 aa4.85□□□□□ -1.63
RNU6-40P-201ENST00000384254 PDLIM5Q96HC4 596 aaKnown RBP4.85□□□□□ -1.63
RNU6-40P-201ENST00000384254 SENP5Q96HI0 755 aaPredicted RBP4.85□□□□□ -1.63
RNU6-40P-201ENST00000384254 RBM41Q96IZ5 413 aaKnown RBP4.85□□□□□ -1.63
RNU6-40P-201ENST00000384254 NKX3-1Q99801 234 aaPredicted RBP4.85□□□□□ -1.63
RNU6-40P-201ENST00000384254 ZNF559Q9BR84 538 aa4.85□□□□□ -1.63
RNU6-40P-201ENST00000384254 KRTAP4-2Q9BYR5 136 aa4.85□□□□□ -1.63
RNU6-40P-201ENST00000384254 DPEP2Q9H4A9 486 aa4.85□□□□□ -1.63
RNU6-40P-201ENST00000384254 COMMD8Q9NX08 183 aa4.85□□□□□ -1.63
RNU6-40P-201ENST00000384254 WWOXQ9NZC7 414 aa4.85□□□□□ -1.63
RNU6-40P-201ENST00000384254 TCF19Q9Y242 345 aa4.85□□□□□ -1.63
RNU6-40P-201ENST00000384254 PFASO15067 1338 aa4.85□□□□□ -1.63
RNU6-40P-201ENST00000384254 KIAA1217Q5T5P2 1943 aa4.84□□□□□ -1.63
RNU6-40P-201ENST00000384254 A0A0A6YYC8 382 aaPredicted RBP4.84□□□□□ -1.63
RNU6-40P-201ENST00000384254 PMS2P5A8MQ11 134 aa4.84□□□□□ -1.63
RNU6-40P-201ENST00000384254 SNURFLB1AK76 121 aa4.84□□□□□ -1.63
RNU6-40P-201ENST00000384254 I3L1I5 382 aaPredicted RBP4.84□□□□□ -1.63
RNU6-40P-201ENST00000384254 DLATP10515 647 aaKnown RBP4.84□□□□□ -1.63
RNU6-40P-201ENST00000384254 SLC2A2P11168 524 aaPredicted RBP4.84□□□□□ -1.63
RNU6-40P-201ENST00000384254 SERPINH1P50454 418 aaKnown RBP4.84□□□□□ -1.63
RNU6-40P-201ENST00000384254 NR0B1P51843 470 aaKnown RBP4.84□□□□□ -1.63
RNU6-40P-201ENST00000384254 RPP38P78345 283 aaKnown RBP4.84□□□□□ -1.63
RNU6-40P-201ENST00000384254 SLC3A1Q07837 685 aa4.84□□□□□ -1.63
RNU6-40P-201ENST00000384254 TEAD2Q15562 447 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms