RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP22.26■■□□□ 1.15
VPS16-201ENST00000380443 ADHFE1Q8IWW8 467 aa22.26■■□□□ 1.15
VPS16-201ENST00000380443 TSPAN14Q8NG11 270 aa22.26■■□□□ 1.15
VPS16-201ENST00000380443 FBXO30Q8TB52 745 aa22.26■■□□□ 1.15
VPS16-201ENST00000380443 TFGQ92734 400 aaPredicted RBP22.26■■□□□ 1.15
VPS16-201ENST00000380443 GFM2Q969S9 779 aaKnown RBP22.26■■□□□ 1.15
VPS16-201ENST00000380443 PYURFQ96I23 114 aa22.26■■□□□ 1.15
VPS16-201ENST00000380443 MYADMQ96S97 322 aa22.26■■□□□ 1.15
VPS16-201ENST00000380443 TRMT61BQ9BVS5 477 aaKnown RBP22.26■■□□□ 1.15
VPS16-201ENST00000380443 BHLHE41Q9C0J9 482 aaPredicted RBP22.26■■□□□ 1.15
VPS16-201ENST00000380443 ATAD3AQ9NVI7 634 aa22.26■■□□□ 1.15
VPS16-201ENST00000380443 TMEM98Q9Y2Y6 226 aa22.26■■□□□ 1.15
VPS16-201ENST00000380443 EYSQ5T1H1 3165 aa22.25■■□□□ 1.15
VPS16-201ENST00000380443 UPK1AO00322 258 aa22.25■■□□□ 1.15
VPS16-201ENST00000380443 PCDH7O60245 1069 aa22.25■■□□□ 1.15
VPS16-201ENST00000380443 KCNJ13O60928 360 aa22.25■■□□□ 1.15
VPS16-201ENST00000380443 PCDH8O95206 1070 aa22.25■■□□□ 1.15
VPS16-201ENST00000380443 ETHE1O95571 254 aa22.25■■□□□ 1.15
VPS16-201ENST00000380443 PCCBP05166 539 aa22.25■■□□□ 1.15
VPS16-201ENST00000380443 LAMP2P13473 410 aa22.25■■□□□ 1.15
VPS16-201ENST00000380443 CXCR2P25025 360 aa22.25■■□□□ 1.15
VPS16-201ENST00000380443 SERPINB1P30740 379 aa22.25■■□□□ 1.15
VPS16-201ENST00000380443 ZNF763Q0D2J5 394 aa22.25■■□□□ 1.15
VPS16-201ENST00000380443 BIRC2Q13490 618 aa22.25■■□□□ 1.15
VPS16-201ENST00000380443 DAG1Q14118 895 aa22.25■■□□□ 1.15
VPS16-201ENST00000380443 CYP2A13Q16696 494 aa22.25■■□□□ 1.15
VPS16-201ENST00000380443 CATSPEREQ5SY80 951 aa22.25■■□□□ 1.15
VPS16-201ENST00000380443 ZNF776Q68DI1 518 aaPredicted RBP22.25■■□□□ 1.15
VPS16-201ENST00000380443 CES5AQ6NT32 575 aa22.25■■□□□ 1.15
VPS16-201ENST00000380443 FAM83HQ6ZRV2 1179 aaPredicted RBP22.25■■□□□ 1.15
VPS16-201ENST00000380443 ZDHHC13Q8IUH4 622 aa22.25■■□□□ 1.15
VPS16-201ENST00000380443 TBC1D20Q96BZ9 403 aa22.25■■□□□ 1.15
VPS16-201ENST00000380443 DGCR14Q96DF8 476 aaKnown RBP22.25■■□□□ 1.15
VPS16-201ENST00000380443 MTERF3Q96E29 417 aa22.25■■□□□ 1.15
VPS16-201ENST00000380443 CHFRQ96EP1 664 aa22.25■■□□□ 1.15
VPS16-201ENST00000380443 PITHD1Q9GZP4 211 aaPredicted RBP22.25■■□□□ 1.15
VPS16-201ENST00000380443 PELI2Q9HAT8 420 aa22.25■■□□□ 1.15
VPS16-201ENST00000380443 CIDEBQ9UHD4 219 aa22.25■■□□□ 1.15
VPS16-201ENST00000380443 V9GYQ6 96 aa22.25■■□□□ 1.15
VPS16-201ENST00000380443 GABRR3A8MPY1 467 aa22.24■■□□□ 1.15
VPS16-201ENST00000380443 RNASET2O00584 256 aaKnown RBP22.24■■□□□ 1.15
VPS16-201ENST00000380443 PRKD3O94806 890 aa22.24■■□□□ 1.15
VPS16-201ENST00000380443 ABCB1P08183 1280 aaPredicted RBP22.24■■□□□ 1.15
VPS16-201ENST00000380443 ENGP17813 658 aa22.24■■□□□ 1.15
VPS16-201ENST00000380443 PTX3P26022 381 aaPredicted RBP22.24■■□□□ 1.15
VPS16-201ENST00000380443 TRIM23P36406 574 aa22.24■■□□□ 1.15
VPS16-201ENST00000380443 ARSFP54793 590 aa22.24■■□□□ 1.15
VPS16-201ENST00000380443 DMPKQ09013 629 aa22.24■■□□□ 1.15
VPS16-201ENST00000380443 SKIV2LQ15477 1246 aaKnown RBP22.24■■□□□ 1.15
VPS16-201ENST00000380443 ENPP6Q6UWR7 440 aa22.24■■□□□ 1.15
VPS16-201ENST00000380443 ZNF621Q6ZSS3 439 aa22.24■■□□□ 1.15
VPS16-201ENST00000380443 HDDC3Q8N4P3 179 aa22.24■■□□□ 1.15
VPS16-201ENST00000380443 ZNF513Q8N8E2 541 aaPredicted RBP22.24■■□□□ 1.15
VPS16-201ENST00000380443 FAM47BQ8NA70 645 aa22.24■■□□□ 1.15
VPS16-201ENST00000380443 OR5K2Q8NHB8 316 aa22.24■■□□□ 1.15
VPS16-201ENST00000380443 MAGEE2Q8TD90 523 aaPredicted RBP22.24■■□□□ 1.15
VPS16-201ENST00000380443 TMBIM1Q969X1 311 aa22.24■■□□□ 1.15
VPS16-201ENST00000380443 RMI1Q9H9A7 625 aa22.24■■□□□ 1.15
VPS16-201ENST00000380443 PRM3Q9NNZ6 103 aa22.24■■□□□ 1.15
VPS16-201ENST00000380443 AASDHPPTQ9NRN7 309 aa22.24■■□□□ 1.15
VPS16-201ENST00000380443 RPS6KA6Q9UK32 745 aa22.24■■□□□ 1.15
VPS16-201ENST00000380443 GNG14A0A1W2PPG7 69 aa22.24■■□□□ 1.15
VPS16-201ENST00000380443 LAMP1P11279 417 aa22.24■■□□□ 1.15
VPS16-201ENST00000380443 IDSP22304 550 aa22.24■■□□□ 1.15
VPS16-201ENST00000380443 HYAL1Q12794 435 aa22.24■■□□□ 1.15
VPS16-201ENST00000380443 VEZF1Q14119 521 aa22.24■■□□□ 1.15
VPS16-201ENST00000380443 THEMIS2Q5TEJ8 643 aa22.24■■□□□ 1.15
VPS16-201ENST00000380443 BORAQ6PGQ7 559 aa22.24■■□□□ 1.15
VPS16-201ENST00000380443 GPR155Q7Z3F1 870 aa22.24■■□□□ 1.15
VPS16-201ENST00000380443 PATL1Q86TB9 770 aaKnown RBP22.24■■□□□ 1.15
VPS16-201ENST00000380443 ZCCHC7Q8N3Z6 543 aaKnown RBP22.24■■□□□ 1.15
VPS16-201ENST00000380443 ZFP28Q8NHY6 868 aa22.24■■□□□ 1.15
VPS16-201ENST00000380443 NETO1Q8TDF5 533 aa22.24■■□□□ 1.15
VPS16-201ENST00000380443 SNX19Q92543 992 aa22.24■■□□□ 1.15
VPS16-201ENST00000380443 AURKBQ96GD4 344 aaPredicted RBP22.24■■□□□ 1.15
VPS16-201ENST00000380443 KXD1Q9BQD3 176 aa22.24■■□□□ 1.15
VPS16-201ENST00000380443 REEP4Q9H6H4 257 aa22.24■■□□□ 1.15
VPS16-201ENST00000380443 PHPT1Q9NRX4 125 aaPredicted RBP22.24■■□□□ 1.15
VPS16-201ENST00000380443 USE1Q9NZ43 259 aa22.24■■□□□ 1.15
VPS16-201ENST00000380443 AHSPQ9NZD4 102 aa22.24■■□□□ 1.15
VPS16-201ENST00000380443 THEGQ9P2T0 379 aa22.24■■□□□ 1.15
VPS16-201ENST00000380443 ZNF282Q9UDV7 671 aaPredicted RBP22.24■■□□□ 1.15
VPS16-201ENST00000380443 WBP11Q9Y2W2 641 aaKnown RBP22.24■■□□□ 1.15
VPS16-201ENST00000380443 PGM3O95394 542 aa22.23■■□□□ 1.15
VPS16-201ENST00000380443 SERPINA1P01009 418 aa22.23■■□□□ 1.15
VPS16-201ENST00000380443 CST1P01037 141 aa22.23■■□□□ 1.15
VPS16-201ENST00000380443 FESP07332 822 aa22.23■■□□□ 1.15
VPS16-201ENST00000380443 VMACQ2NL98 169 aa22.23■■□□□ 1.15
VPS16-201ENST00000380443 CYBRD1Q53TN4 286 aa22.23■■□□□ 1.15
VPS16-201ENST00000380443 METTL4Q8N3J2 472 aa22.23■■□□□ 1.15
VPS16-201ENST00000380443 RAB42Q8N4Z0 105 aa22.23■■□□□ 1.15
VPS16-201ENST00000380443 PUM2Q8TB72 1066 aaKnown RBP eCLIP22.23■■□□□ 1.15
VPS16-201ENST00000380443 NCSTNQ92542 709 aa22.23■■□□□ 1.15
VPS16-201ENST00000380443 OSBPL10Q9BXB5 764 aa22.23■■□□□ 1.15
VPS16-201ENST00000380443 TRIT1Q9H3H1 467 aaKnown RBP22.23■■□□□ 1.15
VPS16-201ENST00000380443 WDR26Q9H7D7 661 aa22.23■■□□□ 1.15
VPS16-201ENST00000380443 MYNNQ9NPC7 610 aa22.23■■□□□ 1.15
VPS16-201ENST00000380443 COL6A3P12111 3177 aa22.23■■□□□ 1.15
VPS16-201ENST00000380443 G3V2T6 193 aa22.22■■□□□ 1.15
VPS16-201ENST00000380443 AHCYL1O43865 530 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms