RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 FRMD1Q8N878 549 aa10.45□□□□□ -0.74
NEDD9-201ENST00000379433 ZNF740Q8NDX6 193 aa10.45□□□□□ -0.74
NEDD9-201ENST00000379433 OR14C36Q8NHC7 312 aa10.45□□□□□ -0.74
NEDD9-201ENST00000379433 LYSMD1Q96S90 227 aa10.45□□□□□ -0.74
NEDD9-201ENST00000379433 IKZF5Q9H5V7 419 aa10.45□□□□□ -0.74
NEDD9-201ENST00000379433 DNAJC11Q9NVH1 559 aa10.45□□□□□ -0.74
NEDD9-201ENST00000379433 CLDND1Q9NY35 253 aa10.45□□□□□ -0.74
NEDD9-201ENST00000379433 SH3BP4Q9P0V3 963 aa10.45□□□□□ -0.74
NEDD9-201ENST00000379433 FBXL21Q9UKT6 434 aa10.45□□□□□ -0.74
NEDD9-201ENST00000379433 CNOT6Q9ULM6 557 aaKnown RBP10.45□□□□□ -0.74
NEDD9-201ENST00000379433 GPC6Q9Y625 555 aaPredicted RBP10.45□□□□□ -0.74
NEDD9-201ENST00000379433 A0A1B0GTW7 788 aa10.45□□□□□ -0.74
NEDD9-201ENST00000379433 DHRS12A0PJE2 317 aa10.45□□□□□ -0.74
NEDD9-201ENST00000379433 OR6C65A6NJZ3 312 aa10.45□□□□□ -0.74
NEDD9-201ENST00000379433 CHURC1-FNTBB4DL54 471 aa10.45□□□□□ -0.74
NEDD9-201ENST00000379433 H3BQ06 376 aaPredicted RBP10.45□□□□□ -0.74
NEDD9-201ENST00000379433 FTH1P02794 183 aa10.45□□□□□ -0.74
NEDD9-201ENST00000379433 EPORP19235 508 aa10.45□□□□□ -0.74
NEDD9-201ENST00000379433 VAMP1P23763 118 aa10.45□□□□□ -0.74
NEDD9-201ENST00000379433 IST1P53990 364 aa10.45□□□□□ -0.74
NEDD9-201ENST00000379433 CDKL1Q00532 357 aa10.45□□□□□ -0.74
NEDD9-201ENST00000379433 RUNX3Q13761 415 aa10.45□□□□□ -0.74
NEDD9-201ENST00000379433 RCAN2Q14206 197 aa10.45□□□□□ -0.74
NEDD9-201ENST00000379433 ADGRE1Q14246 886 aa10.45□□□□□ -0.74
NEDD9-201ENST00000379433 TLR1Q15399 786 aa10.45□□□□□ -0.74
NEDD9-201ENST00000379433 FBXO43Q4G163 708 aa10.45□□□□□ -0.74
NEDD9-201ENST00000379433 CDONQ4KMG0 1287 aa10.45□□□□□ -0.74
NEDD9-201ENST00000379433 XKR7Q5GH72 579 aa10.45□□□□□ -0.74
NEDD9-201ENST00000379433 DEPDC1Q5TB30 811 aa10.45□□□□□ -0.74
NEDD9-201ENST00000379433 OR4F3Q6IEY1 312 aa10.45□□□□□ -0.74
NEDD9-201ENST00000379433 SPATA19Q7Z5L4 167 aa10.45□□□□□ -0.74
NEDD9-201ENST00000379433 SLC9B2Q86UD5 537 aa10.45□□□□□ -0.74
NEDD9-201ENST00000379433 THOC6Q86W42 341 aaKnown RBP10.45□□□□□ -0.74
NEDD9-201ENST00000379433 HEATR4Q86WZ0 1026 aa10.45□□□□□ -0.74
NEDD9-201ENST00000379433 PDSS2Q86YH6 399 aa10.45□□□□□ -0.74
NEDD9-201ENST00000379433 HDDC3Q8N4P3 179 aa10.45□□□□□ -0.74
NEDD9-201ENST00000379433 OR7A2PQ8NGA2 310 aa10.45□□□□□ -0.74
NEDD9-201ENST00000379433 MYADMQ96S97 322 aa10.45□□□□□ -0.74
NEDD9-201ENST00000379433 INPP5KQ9BT40 448 aa10.45□□□□□ -0.74
NEDD9-201ENST00000379433 FANCEQ9HB96 536 aa10.45□□□□□ -0.74
NEDD9-201ENST00000379433 SGK2Q9HBY8 427 aa10.45□□□□□ -0.74
NEDD9-201ENST00000379433 TMEM181Q9P2C4 612 aa10.45□□□□□ -0.74
NEDD9-201ENST00000379433 CA5BQ9Y2D0 317 aa10.45□□□□□ -0.74
NEDD9-201ENST00000379433 SH3D21A4FU49 640 aa10.44□□□□□ -0.74
NEDD9-201ENST00000379433 HOXC12P31275 282 aa10.44□□□□□ -0.74
NEDD9-201ENST00000379433 ACADVLP49748 655 aa10.44□□□□□ -0.74
NEDD9-201ENST00000379433 ELAVL3Q14576 367 aaKnown RBP10.44□□□□□ -0.74
NEDD9-201ENST00000379433 LAPTM4AQ15012 233 aa10.44□□□□□ -0.74
NEDD9-201ENST00000379433 AADACL4Q5VUY2 407 aa10.44□□□□□ -0.74
NEDD9-201ENST00000379433 C1orf122Q6ZSJ8 110 aa10.44□□□□□ -0.74
NEDD9-201ENST00000379433 ZNF621Q6ZSS3 439 aa10.44□□□□□ -0.74
NEDD9-201ENST00000379433 PHOSPHO2Q8TCD6 241 aa10.44□□□□□ -0.74
NEDD9-201ENST00000379433 CYGBQ8WWM9 190 aa10.44□□□□□ -0.74
NEDD9-201ENST00000379433 HS6ST2Q96MM7 605 aa10.44□□□□□ -0.74
NEDD9-201ENST00000379433 NUSAP1Q9BXS6 441 aaKnown RBP10.44□□□□□ -0.74
NEDD9-201ENST00000379433 AP4B1Q9Y6B7 739 aa10.44□□□□□ -0.74
NEDD9-201ENST00000379433 DENND4CQ5VZ89 1909 aa10.44□□□□□ -0.74
NEDD9-201ENST00000379433 CFAP54Q96N23 3096 aa10.44□□□□□ -0.74
NEDD9-201ENST00000379433 CABIN1Q9Y6J0 2220 aa10.44□□□□□ -0.74
NEDD9-201ENST00000379433 MAGEB17A8MXT2 336 aa10.44□□□□□ -0.74
NEDD9-201ENST00000379433 KMOO15229 486 aa10.44□□□□□ -0.74
NEDD9-201ENST00000379433 CRYZL1O95825 349 aa10.44□□□□□ -0.74
NEDD9-201ENST00000379433 CATP04040 527 aaKnown RBP10.44□□□□□ -0.74
NEDD9-201ENST00000379433 LYNP07948 512 aa10.44□□□□□ -0.74
NEDD9-201ENST00000379433 ETS2P15036 469 aa10.44□□□□□ -0.74
NEDD9-201ENST00000379433 ZNF23P17027 643 aa10.44□□□□□ -0.74
NEDD9-201ENST00000379433 ZNF30P17039 623 aa10.44□□□□□ -0.74
NEDD9-201ENST00000379433 ZNF8P17098 575 aaPredicted RBP10.44□□□□□ -0.74
NEDD9-201ENST00000379433 P2RY2P41231 377 aa10.44□□□□□ -0.74
NEDD9-201ENST00000379433 GTF2H3Q13889 308 aa10.44□□□□□ -0.74
NEDD9-201ENST00000379433 DOC2AQ14183 400 aa10.44□□□□□ -0.74
NEDD9-201ENST00000379433 PDGFRLQ15198 375 aa10.44□□□□□ -0.74
NEDD9-201ENST00000379433 XKR5Q6UX68 686 aa10.44□□□□□ -0.74
NEDD9-201ENST00000379433 EFL1Q7Z2Z2 1120 aaKnown RBP10.44□□□□□ -0.74
NEDD9-201ENST00000379433 SYT12Q8IV01 421 aa10.44□□□□□ -0.74
NEDD9-201ENST00000379433 SLC13A3Q8WWT9 602 aa10.44□□□□□ -0.74
NEDD9-201ENST00000379433 HDAC2Q92769 488 aaKnown RBP10.44□□□□□ -0.74
NEDD9-201ENST00000379433 SLCO4A1Q96BD0 722 aa10.44□□□□□ -0.74
NEDD9-201ENST00000379433 PDLIM5Q96HC4 596 aaKnown RBP10.44□□□□□ -0.74
NEDD9-201ENST00000379433 PPP3R2Q96LZ3 170 aa10.44□□□□□ -0.74
NEDD9-201ENST00000379433 FAM129BQ96TA1 746 aa10.44□□□□□ -0.74
NEDD9-201ENST00000379433 PKP4Q99569 1192 aa10.44□□□□□ -0.74
NEDD9-201ENST00000379433 GAL3ST1Q99999 423 aa10.44□□□□□ -0.74
NEDD9-201ENST00000379433 SLC12A9Q9BXP2 914 aa10.44□□□□□ -0.74
NEDD9-201ENST00000379433 OR51B5Q9H339 312 aa10.44□□□□□ -0.74
NEDD9-201ENST00000379433 C1orf109Q9NX04 203 aa10.44□□□□□ -0.74
NEDD9-201ENST00000379433 LIMD1Q9UGP4 676 aa10.44□□□□□ -0.74
NEDD9-201ENST00000379433 DUSP12Q9UNI6 340 aa10.44□□□□□ -0.74
NEDD9-201ENST00000379433 SH2B3Q9UQQ2 575 aa10.44□□□□□ -0.74
NEDD9-201ENST00000379433 KCNK6Q9Y257 313 aa10.44□□□□□ -0.74
NEDD9-201ENST00000379433 PRAMEF33A0A0G2JMD5 474 aa10.43□□□□□ -0.74
NEDD9-201ENST00000379433 SLC22A2O15244 555 aa10.43□□□□□ -0.74
NEDD9-201ENST00000379433 VPS4BO75351 444 aa10.43□□□□□ -0.74
NEDD9-201ENST00000379433 ACP5P13686 325 aa10.43□□□□□ -0.74
NEDD9-201ENST00000379433 GPR85P60893 370 aa10.43□□□□□ -0.74
NEDD9-201ENST00000379433 INPP5AQ14642 412 aa10.43□□□□□ -0.74
NEDD9-201ENST00000379433 PDK3Q15120 406 aa10.43□□□□□ -0.74
NEDD9-201ENST00000379433 HKDC1Q2TB90 917 aa10.43□□□□□ -0.74
NEDD9-201ENST00000379433 GLYATQ6IB77 296 aa10.43□□□□□ -0.74
NEDD9-201ENST00000379433 SZRD1Q7Z422 152 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms