RNA–Protein interactions for RNA: ENST00000378182.3

TRIM13-202, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 7,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-202ENST00000378182 FAM237AA0A1B0GTK4 181 aa13.71□□□□□ -0.21
TRIM13-202ENST00000378182 ISPDA4D126 451 aa13.71□□□□□ -0.21
TRIM13-202ENST00000378182 FAM155AB1AL88 458 aaPredicted RBP13.71□□□□□ -0.21
TRIM13-202ENST00000378182 SSX5O60225 188 aa13.71□□□□□ -0.21
TRIM13-202ENST00000378182 LRCH4O75427 683 aa13.71□□□□□ -0.21
TRIM13-202ENST00000378182 UNC5CO95185 931 aa13.71□□□□□ -0.21
TRIM13-202ENST00000378182 GNRHRP30968 328 aa13.71□□□□□ -0.21
TRIM13-202ENST00000378182 LY6G5CQ5SRR4 150 aa13.71□□□□□ -0.21
TRIM13-202ENST00000378182 SAMD14Q8IZD0 417 aaPredicted RBP13.71□□□□□ -0.21
TRIM13-202ENST00000378182 BRI3BPQ8WY22 251 aa13.71□□□□□ -0.21
TRIM13-202ENST00000378182 DMRTB1Q96MA1 342 aa13.71□□□□□ -0.21
TRIM13-202ENST00000378182 BARD1Q99728 777 aaKnown RBP13.71□□□□□ -0.21
TRIM13-202ENST00000378182 RNF186Q9NXI6 227 aa13.71□□□□□ -0.21
TRIM13-202ENST00000378182 VPS29Q9UBQ0 182 aa13.71□□□□□ -0.21
TRIM13-202ENST00000378182 REV1Q9UBZ9 1251 aa13.71□□□□□ -0.21
TRIM13-202ENST00000378182 ZFR2Q9UPR6 939 aaKnown RBP13.71□□□□□ -0.21
TRIM13-202ENST00000378182 SORCS3Q9UPU3 1222 aa13.71□□□□□ -0.21
TRIM13-202ENST00000378182 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.71□□□□□ -0.21
TRIM13-202ENST00000378182 TFGQ92734 400 aaPredicted RBP13.71□□□□□ -0.21
TRIM13-202ENST00000378182 IL4I1Q96RQ9 567 aa13.71□□□□□ -0.21
TRIM13-202ENST00000378182 HSD17B14Q9BPX1 270 aa13.71□□□□□ -0.21
TRIM13-202ENST00000378182 SLC6A15Q9H2J7 730 aa13.71□□□□□ -0.21
TRIM13-202ENST00000378182 PRTFDC1Q9NRG1 225 aa13.71□□□□□ -0.21
TRIM13-202ENST00000378182 CCDC59Q9P031 241 aaKnown RBP13.71□□□□□ -0.21
TRIM13-202ENST00000378182 PRPF19Q9UMS4 504 aaKnown RBP13.71□□□□□ -0.21
TRIM13-202ENST00000378182 MYH8P13535 1937 aa13.71□□□□□ -0.21
TRIM13-202ENST00000378182 DUXAA6NLW8 204 aa13.71□□□□□ -0.21
TRIM13-202ENST00000378182 MPPED1O15442 326 aa13.71□□□□□ -0.21
TRIM13-202ENST00000378182 HCRTR2O43614 444 aa13.71□□□□□ -0.21
TRIM13-202ENST00000378182 CSF2RAP15509 400 aa13.71□□□□□ -0.21
TRIM13-202ENST00000378182 KLHL36Q8N4N3 616 aa13.71□□□□□ -0.21
TRIM13-202ENST00000378182 ACSS3Q9H6R3 686 aa13.71□□□□□ -0.21
TRIM13-202ENST00000378182 TCRBV7S2A1N4TA0A589 114 aa13.71□□□□□ -0.21
TRIM13-202ENST00000378182 HAS3O00219 553 aa13.71□□□□□ -0.21
TRIM13-202ENST00000378182 PLK4O00444 970 aa13.71□□□□□ -0.21
TRIM13-202ENST00000378182 BRINP1O60477 761 aa13.71□□□□□ -0.21
TRIM13-202ENST00000378182 ARL9Q6T311 187 aa13.71□□□□□ -0.21
TRIM13-202ENST00000378182 CEACAM20Q6UY09 585 aa13.71□□□□□ -0.21
TRIM13-202ENST00000378182 SMARCD2Q92925 531 aa13.71□□□□□ -0.21
TRIM13-202ENST00000378182 HSPBAP1Q96EW2 488 aa13.71□□□□□ -0.21
TRIM13-202ENST00000378182 FBXL18Q96ME1 805 aa13.71□□□□□ -0.21
TRIM13-202ENST00000378182 ATXN10Q9UBB4 475 aa13.71□□□□□ -0.21
TRIM13-202ENST00000378182 ROBO1Q9Y6N7 1651 aa13.71□□□□□ -0.22
TRIM13-202ENST00000378182 ITGA10O75578 1167 aa13.71□□□□□ -0.22
TRIM13-202ENST00000378182 ABHD2P08910 425 aa13.71□□□□□ -0.22
TRIM13-202ENST00000378182 TUBG1P23258 451 aa13.71□□□□□ -0.22
TRIM13-202ENST00000378182 SLC11A1P49279 550 aa13.71□□□□□ -0.22
TRIM13-202ENST00000378182 XIAPP98170 497 aa13.71□□□□□ -0.22
TRIM13-202ENST00000378182 SYPL2Q5VXT5 272 aa13.71□□□□□ -0.22
TRIM13-202ENST00000378182 PRR18Q8N4B5 295 aa13.71□□□□□ -0.22
TRIM13-202ENST00000378182 C1orf52Q8N6N3 182 aaKnown RBP13.71□□□□□ -0.22
TRIM13-202ENST00000378182 TOR1BO14657 336 aa13.7□□□□□ -0.22
TRIM13-202ENST00000378182 GRID2O43424 1007 aa13.7□□□□□ -0.22
TRIM13-202ENST00000378182 ESR1P03372 595 aa13.7□□□□□ -0.22
TRIM13-202ENST00000378182 MMP8P22894 467 aa13.7□□□□□ -0.22
TRIM13-202ENST00000378182 CDKN2BP42772 138 aa13.7□□□□□ -0.22
TRIM13-202ENST00000378182 MLC1Q15049 377 aa13.7□□□□□ -0.22
TRIM13-202ENST00000378182 SLC13A3Q8WWT9 602 aa13.7□□□□□ -0.22
TRIM13-202ENST00000378182 TFAP2BQ92481 460 aa13.7□□□□□ -0.22
TRIM13-202ENST00000378182 C14orf105Q9NVL8 296 aa13.7□□□□□ -0.22
TRIM13-202ENST00000378182 PPP4R1LQ9P1A2 415 aa13.7□□□□□ -0.22
TRIM13-202ENST00000378182 MSL3P1P0C860 447 aa13.7□□□□□ -0.22
TRIM13-202ENST00000378182 CD53P19397 219 aa13.7□□□□□ -0.22
TRIM13-202ENST00000378182 CCNHP51946 323 aaPredicted RBP13.7□□□□□ -0.22
TRIM13-202ENST00000378182 TMEM214Q6NUQ4 689 aaKnown RBP13.7□□□□□ -0.22
TRIM13-202ENST00000378182 PAQR3Q6TCH7 311 aa13.7□□□□□ -0.22
TRIM13-202ENST00000378182 NSMAFQ92636 917 aa13.7□□□□□ -0.22
TRIM13-202ENST00000378182 SP140LQ9H930 580 aa13.7□□□□□ -0.22
TRIM13-202ENST00000378182 ABCD2Q9UBJ2 740 aa13.7□□□□□ -0.22
TRIM13-202ENST00000378182 CDH22Q9UJ99 828 aa13.7□□□□□ -0.22
TRIM13-202ENST00000378182 A0A1B0GVI7 797 aa13.7□□□□□ -0.22
TRIM13-202ENST00000378182 FEZF1A0PJY2 475 aa13.7□□□□□ -0.22
TRIM13-202ENST00000378182 M0R036 132 aa13.7□□□□□ -0.22
TRIM13-202ENST00000378182 IRAK2O43187 625 aa13.7□□□□□ -0.22
TRIM13-202ENST00000378182 RPL19P84098 196 aaKnown RBP13.7□□□□□ -0.22
TRIM13-202ENST00000378182 ZFP69Q49AA0 526 aa13.7□□□□□ -0.22
TRIM13-202ENST00000378182 FLYWCH1Q4VC44 716 aa13.7□□□□□ -0.22
TRIM13-202ENST00000378182 SLC44A1Q8WWI5 657 aa13.7□□□□□ -0.22
TRIM13-202ENST00000378182 TMEM41AQ96HV5 264 aa13.7□□□□□ -0.22
TRIM13-202ENST00000378182 PTCHD1Q96NR3 888 aa13.7□□□□□ -0.22
TRIM13-202ENST00000378182 TIGARQ9NQ88 270 aa13.7□□□□□ -0.22
TRIM13-202ENST00000378182 GRHL1Q9NZI5 618 aa13.7□□□□□ -0.22
TRIM13-202ENST00000378182 PLOD2O00469 737 aa13.7□□□□□ -0.22
TRIM13-202ENST00000378182 DUX1O43812 170 aa13.7□□□□□ -0.22
TRIM13-202ENST00000378182 MPZL2O60487 215 aa13.7□□□□□ -0.22
TRIM13-202ENST00000378182 SNX3O60493 162 aa13.7□□□□□ -0.22
TRIM13-202ENST00000378182 BMP8BP34820 402 aa13.7□□□□□ -0.22
TRIM13-202ENST00000378182 ARSKQ6UWY0 536 aa13.7□□□□□ -0.22
TRIM13-202ENST00000378182 BMP8AQ7Z5Y6 402 aa13.7□□□□□ -0.22
TRIM13-202ENST00000378182 VGLL2Q8N8G2 317 aa13.7□□□□□ -0.22
TRIM13-202ENST00000378182 RNPEPL1Q9HAU8 725 aa13.7□□□□□ -0.22
TRIM13-202ENST00000378182 ASB6Q9NWX5 421 aa13.7□□□□□ -0.22
TRIM13-202ENST00000378182 MROH2AA6NES4 1674 aa13.7□□□□□ -0.22
TRIM13-202ENST00000378182 FABP12A6NFH5 140 aa13.7□□□□□ -0.22
TRIM13-202ENST00000378182 PTX3P26022 381 aaPredicted RBP13.7□□□□□ -0.22
TRIM13-202ENST00000378182 CAV3P56539 151 aa13.7□□□□□ -0.22
TRIM13-202ENST00000378182 RPS21P63220 83 aaKnown RBP13.7□□□□□ -0.22
TRIM13-202ENST00000378182 MPP2Q14168 576 aa13.7□□□□□ -0.22
TRIM13-202ENST00000378182 OR8K5Q8NH50 307 aa13.7□□□□□ -0.22
TRIM13-202ENST00000378182 RHBDD1Q8TEB9 315 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms