RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 TMEM215Q68D42 235 aa10.55□□□□□ -0.72
BEST1-201ENST00000378043 AGTRAPQ6RW13 159 aa10.55□□□□□ -0.72
BEST1-201ENST00000378043 SLCO6A1Q86UG4 719 aa10.55□□□□□ -0.72
BEST1-201ENST00000378043 HORMAD1Q86X24 394 aa10.55□□□□□ -0.72
BEST1-201ENST00000378043 C1orf52Q8N6N3 182 aaKnown RBP10.55□□□□□ -0.72
BEST1-201ENST00000378043 ZFP90Q8TF47 636 aa10.55□□□□□ -0.72
BEST1-201ENST00000378043 VMP1Q96GC9 406 aa10.55□□□□□ -0.72
BEST1-201ENST00000378043 TPD52L3Q96J77 140 aa10.55□□□□□ -0.72
BEST1-201ENST00000378043 SAMD11Q96NU1 681 aa10.55□□□□□ -0.72
BEST1-201ENST00000378043 CEP44Q9C0F1 390 aa10.55□□□□□ -0.72
BEST1-201ENST00000378043 ACOT13Q9NPJ3 140 aa10.55□□□□□ -0.72
BEST1-201ENST00000378043 KRT84Q9NSB2 600 aa10.55□□□□□ -0.72
BEST1-201ENST00000378043 PCDH10Q9P2E7 1040 aa10.55□□□□□ -0.72
BEST1-201ENST00000378043 STOX2Q9P2F5 926 aaPredicted RBP10.55□□□□□ -0.72
BEST1-201ENST00000378043 ALPK3Q96L96 1907 aa10.55□□□□□ -0.72
BEST1-201ENST00000378043 NPC1O15118 1278 aa10.55□□□□□ -0.72
BEST1-201ENST00000378043 GRM6O15303 877 aa10.55□□□□□ -0.72
BEST1-201ENST00000378043 ZSCAN9O15535 394 aaPredicted RBP10.55□□□□□ -0.72
BEST1-201ENST00000378043 FADS2O95864 444 aaKnown RBP10.55□□□□□ -0.72
BEST1-201ENST00000378043 SLC16A8O95907 504 aa10.55□□□□□ -0.72
BEST1-201ENST00000378043 AQP1P29972 269 aa10.55□□□□□ -0.72
BEST1-201ENST00000378043 PREPP48147 710 aa10.55□□□□□ -0.72
BEST1-201ENST00000378043 CD97P48960 835 aa10.55□□□□□ -0.72
BEST1-201ENST00000378043 BCAP31P51572 246 aa10.55□□□□□ -0.72
BEST1-201ENST00000378043 NCS1P62166 190 aa10.55□□□□□ -0.72
BEST1-201ENST00000378043 IFITM3Q01628 133 aa10.55□□□□□ -0.72
BEST1-201ENST00000378043 ZNF33BQ06732 778 aa10.55□□□□□ -0.72
BEST1-201ENST00000378043 NPRL3Q12980 569 aa10.55□□□□□ -0.72
BEST1-201ENST00000378043 KCNC3Q14003 757 aa10.55□□□□□ -0.72
BEST1-201ENST00000378043 DGCR6Q14129 220 aa10.55□□□□□ -0.72
BEST1-201ENST00000378043 HENMT1Q5T8I9 393 aaKnown RBP10.55□□□□□ -0.72
BEST1-201ENST00000378043 EGFLAMQ63HQ2 1017 aa10.55□□□□□ -0.72
BEST1-201ENST00000378043 GRHL2Q6ISB3 625 aa10.55□□□□□ -0.72
BEST1-201ENST00000378043 CCDC81Q6ZN84 652 aa10.55□□□□□ -0.72
BEST1-201ENST00000378043 ADIPOR2Q86V24 386 aa10.55□□□□□ -0.72
BEST1-201ENST00000378043 TMCO5AQ8N6Q1 288 aa10.55□□□□□ -0.72
BEST1-201ENST00000378043 ATG16L2Q8NAA4 619 aa10.55□□□□□ -0.72
BEST1-201ENST00000378043 ZNF540Q8NDQ6 660 aa10.55□□□□□ -0.72
BEST1-201ENST00000378043 MAGEB10Q96LZ2 347 aaPredicted RBP10.55□□□□□ -0.72
BEST1-201ENST00000378043 PITX2Q99697 317 aa10.55□□□□□ -0.72
BEST1-201ENST00000378043 APOL4Q9BPW4 351 aa10.55□□□□□ -0.72
BEST1-201ENST00000378043 REEP1Q9H902 201 aa10.55□□□□□ -0.72
BEST1-201ENST00000378043 GPATCH2Q9NW75 528 aa10.55□□□□□ -0.72
BEST1-201ENST00000378043 XIRP2A4UGR9 3374 aa10.54□□□□□ -0.72
BEST1-201ENST00000378043 SLC22A1O15245 554 aa10.54□□□□□ -0.72
BEST1-201ENST00000378043 TSPAN6O43657 245 aa10.54□□□□□ -0.72
BEST1-201ENST00000378043 PCDH7O60245 1069 aa10.54□□□□□ -0.72
BEST1-201ENST00000378043 IDSP22304 550 aa10.54□□□□□ -0.72
BEST1-201ENST00000378043 RGNQ15493 299 aa10.54□□□□□ -0.72
BEST1-201ENST00000378043 HKDC1Q2TB90 917 aa10.54□□□□□ -0.72
BEST1-201ENST00000378043 PROX2Q3B8N5 592 aa10.54□□□□□ -0.72
BEST1-201ENST00000378043 Q6ZPB1 254 aaPredicted RBP10.54□□□□□ -0.72
BEST1-201ENST00000378043 SNX29P2Q8IUI4 249 aa10.54□□□□□ -0.72
BEST1-201ENST00000378043 NAGSQ8N159 534 aa10.54□□□□□ -0.72
BEST1-201ENST00000378043 RASGEF1AQ8N9B8 481 aa10.54□□□□□ -0.72
BEST1-201ENST00000378043 OR7G3Q8NG95 312 aa10.54□□□□□ -0.72
BEST1-201ENST00000378043 DYNC2LI1Q8TCX1 351 aa10.54□□□□□ -0.72
BEST1-201ENST00000378043 RPL3LQ92901 407 aaKnown RBP10.54□□□□□ -0.72
BEST1-201ENST00000378043 CLP1Q92989 425 aaKnown RBP10.54□□□□□ -0.72
BEST1-201ENST00000378043 MED8Q96G25 268 aa10.54□□□□□ -0.72
BEST1-201ENST00000378043 BCL7BQ9BQE9 202 aa10.54□□□□□ -0.72
BEST1-201ENST00000378043 NEURL2Q9BR09 285 aa10.54□□□□□ -0.72
BEST1-201ENST00000378043 RIOK2Q9BVS4 552 aaKnown RBP10.54□□□□□ -0.72
BEST1-201ENST00000378043 NECTIN3Q9NQS3 549 aa10.54□□□□□ -0.72
BEST1-201ENST00000378043 CHCHD3Q9NX63 227 aaKnown RBP10.54□□□□□ -0.72
BEST1-201ENST00000378043 SCN3BQ9NY72 215 aa10.54□□□□□ -0.72
BEST1-201ENST00000378043 SLC25A13Q9UJS0 675 aa10.54□□□□□ -0.72
BEST1-201ENST00000378043 SH3GLB1Q9Y371 365 aa10.54□□□□□ -0.72
BEST1-201ENST00000378043 CCDC88CQ9P219 2028 aa10.54□□□□□ -0.72
BEST1-201ENST00000378043 WASH3PC4AMC7 463 aa10.54□□□□□ -0.72
BEST1-201ENST00000378043 NEDD8-MDP1E9PL57 170 aa10.54□□□□□ -0.72
BEST1-201ENST00000378043 DPM1O60762 260 aa10.54□□□□□ -0.72
BEST1-201ENST00000378043 C9P02748 559 aa10.54□□□□□ -0.72
BEST1-201ENST00000378043 NTRK1P04629 796 aa10.54□□□□□ -0.72
BEST1-201ENST00000378043 ANXA4P09525 319 aaPredicted RBP10.54□□□□□ -0.72
BEST1-201ENST00000378043 PABPC1P11940 636 aaKnown RBP10.54□□□□□ -0.72
BEST1-201ENST00000378043 ZNF30P17039 623 aa10.54□□□□□ -0.72
BEST1-201ENST00000378043 PSMB9P28065 219 aa10.54□□□□□ -0.72
BEST1-201ENST00000378043 IMPA1P29218 277 aa10.54□□□□□ -0.72
BEST1-201ENST00000378043 TGFBR1P36897 503 aa10.54□□□□□ -0.72
BEST1-201ENST00000378043 MVDP53602 400 aa10.54□□□□□ -0.72
BEST1-201ENST00000378043 DCDC1P59894 354 aa10.54□□□□□ -0.72
BEST1-201ENST00000378043 POLR2LP62875 67 aaKnown RBP10.54□□□□□ -0.72
BEST1-201ENST00000378043 CAMK2GQ13555 558 aaPredicted RBP10.54□□□□□ -0.72
BEST1-201ENST00000378043 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.54□□□□□ -0.72
BEST1-201ENST00000378043 CPTPQ5TA50 214 aa10.54□□□□□ -0.72
BEST1-201ENST00000378043 CAMKMTQ7Z624 323 aa10.54□□□□□ -0.72
BEST1-201ENST00000378043 P2RY8Q86VZ1 359 aa10.54□□□□□ -0.72
BEST1-201ENST00000378043 ENTHD1Q8IYW4 607 aa10.54□□□□□ -0.72
BEST1-201ENST00000378043 MFSD4AQ8N468 514 aa10.54□□□□□ -0.72
BEST1-201ENST00000378043 HUS1BQ8NHY5 278 aa10.54□□□□□ -0.72
BEST1-201ENST00000378043 CHTF18Q8WVB6 975 aa10.54□□□□□ -0.72
BEST1-201ENST00000378043 COQ8BQ96D53 544 aa10.54□□□□□ -0.72
BEST1-201ENST00000378043 ALPK1Q96QP1 1244 aa10.54□□□□□ -0.72
BEST1-201ENST00000378043 FAM83CQ9BQN1 747 aa10.54□□□□□ -0.72
BEST1-201ENST00000378043 EMILIN2Q9BXX0 1053 aa10.54□□□□□ -0.72
BEST1-201ENST00000378043 SGK2Q9HBY8 427 aa10.54□□□□□ -0.72
BEST1-201ENST00000378043 SELENONQ9NZV5 590 aa10.54□□□□□ -0.72
BEST1-201ENST00000378043 GULP1Q9UBP9 304 aa10.54□□□□□ -0.72
BEST1-201ENST00000378043 BTNL2Q9UIR0 455 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms