RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 TSTD2Q5T7W7 516 aa10.51□□□□□ -0.73
HIF3A-205ENST00000377670 TMEM214Q6NUQ4 689 aaKnown RBP10.51□□□□□ -0.73
HIF3A-205ENST00000377670 TTC9BQ8N6N2 239 aa10.51□□□□□ -0.73
HIF3A-205ENST00000377670 OR52J3Q8NH60 311 aa10.51□□□□□ -0.73
HIF3A-205ENST00000377670 HERPUD2Q9BSE4 406 aa10.51□□□□□ -0.73
HIF3A-205ENST00000377670 MUC13Q9H3R2 512 aa10.51□□□□□ -0.73
HIF3A-205ENST00000377670 SH3BGRL2Q9UJC5 107 aa10.51□□□□□ -0.73
HIF3A-205ENST00000377670 DNMT3AQ9Y6K1 912 aaPredicted RBP10.51□□□□□ -0.73
HIF3A-205ENST00000377670 A0A0D9SEW6 157 aa10.51□□□□□ -0.73
HIF3A-205ENST00000377670 CIB4A0PJX0 185 aa10.51□□□□□ -0.73
HIF3A-205ENST00000377670 FAUP35544 74 aaKnown RBP10.51□□□□□ -0.73
HIF3A-205ENST00000377670 GRK6P43250 576 aa10.51□□□□□ -0.73
HIF3A-205ENST00000377670 E2F2Q14209 437 aa10.51□□□□□ -0.73
HIF3A-205ENST00000377670 PRAMEF14Q5SWL7 426 aa10.51□□□□□ -0.73
HIF3A-205ENST00000377670 ABHD17BQ5VST6 288 aa10.51□□□□□ -0.73
HIF3A-205ENST00000377670 PRAMEF13Q5VWM6 474 aa10.51□□□□□ -0.73
HIF3A-205ENST00000377670 SLC22A15Q8IZD6 547 aa10.51□□□□□ -0.73
HIF3A-205ENST00000377670 GJD3Q8N144 294 aa10.51□□□□□ -0.73
HIF3A-205ENST00000377670 METTL27Q8N6F8 245 aaPredicted RBP10.51□□□□□ -0.73
HIF3A-205ENST00000377670 KBTBD7Q8WVZ9 684 aa10.51□□□□□ -0.73
HIF3A-205ENST00000377670 SMPDL3AQ92484 453 aa10.51□□□□□ -0.73
HIF3A-205ENST00000377670 TFGQ92734 400 aaPredicted RBP10.51□□□□□ -0.73
HIF3A-205ENST00000377670 MMABQ96EY8 250 aaPredicted RBP10.51□□□□□ -0.73
HIF3A-205ENST00000377670 FAXDC2Q96IV6 333 aa10.51□□□□□ -0.73
HIF3A-205ENST00000377670 DUSP23Q9BVJ7 150 aa10.51□□□□□ -0.73
HIF3A-205ENST00000377670 BHLHE41Q9C0J9 482 aaPredicted RBP10.51□□□□□ -0.73
HIF3A-205ENST00000377670 EBF2Q9HAK2 575 aa10.51□□□□□ -0.73
HIF3A-205ENST00000377670 MLXQ9UH92 298 aa10.51□□□□□ -0.73
HIF3A-205ENST00000377670 TMEM59LQ9UK28 342 aa10.51□□□□□ -0.73
HIF3A-205ENST00000377670 H3BSA7 217 aa10.51□□□□□ -0.73
HIF3A-205ENST00000377670 HSPA7P48741 367 aa10.51□□□□□ -0.73
HIF3A-205ENST00000377670 LIMK2P53671 638 aa10.51□□□□□ -0.73
HIF3A-205ENST00000377670 BNIP3Q12983 259 aa10.51□□□□□ -0.73
HIF3A-205ENST00000377670 KLHL26Q53HC5 615 aa10.51□□□□□ -0.73
HIF3A-205ENST00000377670 MS4A13Q5J8X5 152 aa10.51□□□□□ -0.73
HIF3A-205ENST00000377670 CCDC54Q8NEL0 328 aa10.51□□□□□ -0.73
HIF3A-205ENST00000377670 OR5T3Q8NGG3 340 aa10.51□□□□□ -0.73
HIF3A-205ENST00000377670 POP5Q969H6 163 aaKnown RBP10.51□□□□□ -0.73
HIF3A-205ENST00000377670 TSSK3Q96PN8 268 aa10.51□□□□□ -0.73
HIF3A-205ENST00000377670 TRNT1Q96Q11 434 aaKnown RBP10.51□□□□□ -0.73
HIF3A-205ENST00000377670 TEFMQ96QE5 360 aaKnown RBP10.51□□□□□ -0.73
HIF3A-205ENST00000377670 C1QTNF1Q9BXJ1 281 aa10.51□□□□□ -0.73
HIF3A-205ENST00000377670 SLC2A11Q9BYW1 496 aa10.51□□□□□ -0.73
HIF3A-205ENST00000377670 SSU72Q9NP77 194 aaKnown RBP10.51□□□□□ -0.73
HIF3A-205ENST00000377670 EIF2B4Q9UI10 523 aaKnown RBP10.51□□□□□ -0.73
HIF3A-205ENST00000377670 IKZF2Q9UKS7 526 aa10.51□□□□□ -0.73
HIF3A-205ENST00000377670 ELOVL7A1L3X0 281 aa10.5□□□□□ -0.73
HIF3A-205ENST00000377670 FAM86C2PA6NEL3 165 aa10.5□□□□□ -0.73
HIF3A-205ENST00000377670 RFXAPO00287 272 aa10.5□□□□□ -0.73
HIF3A-205ENST00000377670 COCHO43405 550 aa10.5□□□□□ -0.73
HIF3A-205ENST00000377670 UGT2B17O75795 530 aa10.5□□□□□ -0.73
HIF3A-205ENST00000377670 SDHBP21912 280 aa10.5□□□□□ -0.73
HIF3A-205ENST00000377670 CXCR1P25024 350 aa10.5□□□□□ -0.73
HIF3A-205ENST00000377670 SHMT2P34897 504 aa10.5□□□□□ -0.73
HIF3A-205ENST00000377670 GPX6P59796 221 aa10.5□□□□□ -0.73
HIF3A-205ENST00000377670 SCRN3Q0VDG4 424 aa10.5□□□□□ -0.73
HIF3A-205ENST00000377670 SWI5Q1ZZU3 235 aa10.5□□□□□ -0.73
HIF3A-205ENST00000377670 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.5□□□□□ -0.73
HIF3A-205ENST00000377670 METTL21CQ5VZV1 264 aa10.5□□□□□ -0.73
HIF3A-205ENST00000377670 RPS27LQ71UM5 84 aaKnown RBP10.5□□□□□ -0.73
HIF3A-205ENST00000377670 VASH1Q7L8A9 365 aaPredicted RBP10.5□□□□□ -0.73
HIF3A-205ENST00000377670 FSTL5Q8N475 847 aaPredicted RBP10.5□□□□□ -0.73
HIF3A-205ENST00000377670 CLEC1AQ8NC01 280 aa10.5□□□□□ -0.73
HIF3A-205ENST00000377670 TRMOQ9BU70 441 aa10.5□□□□□ -0.73
HIF3A-205ENST00000377670 CXCL16Q9H2A7 254 aa10.5□□□□□ -0.73
HIF3A-205ENST00000377670 MALT1Q9UDY8 824 aa10.5□□□□□ -0.73
HIF3A-205ENST00000377670 CNOT6Q9ULM6 557 aaKnown RBP10.5□□□□□ -0.73
HIF3A-205ENST00000377670 TNFRSF11BO00300 401 aa10.5□□□□□ -0.73
HIF3A-205ENST00000377670 GPIP06744 558 aa10.5□□□□□ -0.73
HIF3A-205ENST00000377670 SRPRAP08240 638 aaKnown RBP10.5□□□□□ -0.73
HIF3A-205ENST00000377670 ZNF823P16415 610 aa10.5□□□□□ -0.73
HIF3A-205ENST00000377670 ARG2P78540 354 aa10.5□□□□□ -0.73
HIF3A-205ENST00000377670 ZNF805Q5CZA5 627 aa10.5□□□□□ -0.73
HIF3A-205ENST00000377670 C15orf39Q6ZRI6 1047 aa10.5□□□□□ -0.73
HIF3A-205ENST00000377670 RANBP3LQ86VV4 465 aaPredicted RBP10.5□□□□□ -0.73
HIF3A-205ENST00000377670 CEP295NLQ96MC4 621 aa10.5□□□□□ -0.73
HIF3A-205ENST00000377670 NSMCE3Q96MG7 304 aa10.5□□□□□ -0.73
HIF3A-205ENST00000377670 EBF4Q9BQW3 602 aa10.5□□□□□ -0.73
HIF3A-205ENST00000377670 STRA6Q9BX79 667 aa10.5□□□□□ -0.73
HIF3A-205ENST00000377670 KAT8Q9H7Z6 458 aaKnown RBP10.5□□□□□ -0.73
HIF3A-205ENST00000377670 IRGMA1A4Y4 181 aa10.5□□□□□ -0.73
HIF3A-205ENST00000377670 ZNF208O43345 1280 aa10.5□□□□□ -0.73
HIF3A-205ENST00000377670 ATF6P18850 670 aa10.5□□□□□ -0.73
HIF3A-205ENST00000377670 PRKCHP24723 683 aa10.5□□□□□ -0.73
HIF3A-205ENST00000377670 GSCP56915 257 aaPredicted RBP10.5□□□□□ -0.73
HIF3A-205ENST00000377670 KIAA1161Q6NSJ0 714 aa10.5□□□□□ -0.73
HIF3A-205ENST00000377670 DRICH1Q6PGQ1 229 aaPredicted RBP10.5□□□□□ -0.73
HIF3A-205ENST00000377670 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.5□□□□□ -0.73
HIF3A-205ENST00000377670 CENPSQ8N2Z9 138 aa10.5□□□□□ -0.73
HIF3A-205ENST00000377670 ZSCAN4Q8NAM6 433 aaPredicted RBP10.5□□□□□ -0.73
HIF3A-205ENST00000377670 FRS2Q8WU20 508 aa10.5□□□□□ -0.73
HIF3A-205ENST00000377670 USP29Q9HBJ7 922 aa10.5□□□□□ -0.73
HIF3A-205ENST00000377670 SCDO00767 359 aa10.5□□□□□ -0.73
HIF3A-205ENST00000377670 PSKH1P11801 424 aa10.5□□□□□ -0.73
HIF3A-205ENST00000377670 EFNA1P20827 205 aaPredicted RBP10.5□□□□□ -0.73
HIF3A-205ENST00000377670 MPIP34949 423 aa10.5□□□□□ -0.73
HIF3A-205ENST00000377670 WDR4P57081 412 aaKnown RBP10.5□□□□□ -0.73
HIF3A-205ENST00000377670 RPS3AP61247 264 aaKnown RBP10.5□□□□□ -0.73
HIF3A-205ENST00000377670 RAB33AQ14088 237 aa10.5□□□□□ -0.73
HIF3A-205ENST00000377670 ELAVL3Q14576 367 aaKnown RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms