RNA–Protein interactions for RNA: ENST00000377294.2

ZKSCAN4-201, Transcript of zinc finger with KRAB and SCAN domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZKSCAN4, Length 2,375 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN4-201ENST00000377294 NODALQ96S42 347 aa14□□□□□ -0.17
ZKSCAN4-201ENST00000377294 TMEM184CQ9NVA4 438 aa14□□□□□ -0.17
ZKSCAN4-201ENST00000377294 IL36AQ9UHA7 158 aa14□□□□□ -0.17
ZKSCAN4-201ENST00000377294 SAMD4AQ9UPU9 718 aaKnown RBP14□□□□□ -0.17
ZKSCAN4-201ENST00000377294 SAMHD1Q9Y3Z3 626 aaKnown RBP14□□□□□ -0.17
ZKSCAN4-201ENST00000377294 PCM1Q15154 2024 aa13.99□□□□□ -0.17
ZKSCAN4-201ENST00000377294 LRRK1Q38SD2 2015 aa13.99□□□□□ -0.17
ZKSCAN4-201ENST00000377294 WASH3PC4AMC7 463 aa13.99□□□□□ -0.17
ZKSCAN4-201ENST00000377294 SCAMP2O15127 329 aaKnown RBP13.99□□□□□ -0.17
ZKSCAN4-201ENST00000377294 SLC16A5O15375 505 aa13.99□□□□□ -0.17
ZKSCAN4-201ENST00000377294 PCDH7O60245 1069 aa13.99□□□□□ -0.17
ZKSCAN4-201ENST00000377294 ARHGEF15O94989 841 aa13.99□□□□□ -0.17
ZKSCAN4-201ENST00000377294 INHBBP09529 407 aa13.99□□□□□ -0.17
ZKSCAN4-201ENST00000377294 EPCAMP16422 314 aa13.99□□□□□ -0.17
ZKSCAN4-201ENST00000377294 CD6P30203 668 aa13.99□□□□□ -0.17
ZKSCAN4-201ENST00000377294 PPM1AP35813 382 aa13.99□□□□□ -0.17
ZKSCAN4-201ENST00000377294 BMXP51813 675 aa13.99□□□□□ -0.17
ZKSCAN4-201ENST00000377294 EMX1Q04741 257 aaPredicted RBP13.99□□□□□ -0.17
ZKSCAN4-201ENST00000377294 GRSF1Q12849 480 aaKnown RBP eCLIP13.99□□□□□ -0.17
ZKSCAN4-201ENST00000377294 STARD3Q14849 445 aa13.99□□□□□ -0.17
ZKSCAN4-201ENST00000377294 LIPJQ5W064 366 aa13.99□□□□□ -0.17
ZKSCAN4-201ENST00000377294 TECPR1Q7Z6L1 1165 aa13.99□□□□□ -0.17
ZKSCAN4-201ENST00000377294 HORMAD1Q86X24 394 aa13.99□□□□□ -0.17
ZKSCAN4-201ENST00000377294 NAGSQ8N159 534 aa13.99□□□□□ -0.17
ZKSCAN4-201ENST00000377294 TRAM1L1Q8N609 369 aa13.99□□□□□ -0.17
ZKSCAN4-201ENST00000377294 SLC15A4Q8N697 577 aa13.99□□□□□ -0.17
ZKSCAN4-201ENST00000377294 OR5AK3PQ8NH89 298 aa13.99□□□□□ -0.17
ZKSCAN4-201ENST00000377294 CLP1Q92989 425 aaKnown RBP13.99□□□□□ -0.17
ZKSCAN4-201ENST00000377294 RDH12Q96NR8 316 aa13.99□□□□□ -0.17
ZKSCAN4-201ENST00000377294 TUBA1CQ9BQE3 449 aa13.99□□□□□ -0.17
ZKSCAN4-201ENST00000377294 SORBS1Q9BX66 1292 aaKnown RBP13.99□□□□□ -0.17
ZKSCAN4-201ENST00000377294 CXXC1Q9P0U4 656 aaPredicted RBP13.99□□□□□ -0.17
ZKSCAN4-201ENST00000377294 PLAGL1Q9UM63 463 aa13.99□□□□□ -0.17
ZKSCAN4-201ENST00000377294 ORC6Q9Y5N6 252 aa13.99□□□□□ -0.17
ZKSCAN4-201ENST00000377294 TRIM64BA6NI03 449 aa13.98□□□□□ -0.17
ZKSCAN4-201ENST00000377294 TMEM229AB2RXF0 380 aa13.98□□□□□ -0.17
ZKSCAN4-201ENST00000377294 GCM2O75603 506 aaPredicted RBP13.98□□□□□ -0.17
ZKSCAN4-201ENST00000377294 TGFB1P01137 390 aa13.98□□□□□ -0.17
ZKSCAN4-201ENST00000377294 SEMG1P04279 462 aa13.98□□□□□ -0.17
ZKSCAN4-201ENST00000377294 ZNF30P17039 623 aa13.98□□□□□ -0.17
ZKSCAN4-201ENST00000377294 TTKP33981 857 aa13.98□□□□□ -0.17
ZKSCAN4-201ENST00000377294 TBPL1P62380 186 aa13.98□□□□□ -0.17
ZKSCAN4-201ENST00000377294 FPGSQ05932 587 aa13.98□□□□□ -0.17
ZKSCAN4-201ENST00000377294 CSTF3Q12996 717 aaKnown RBP13.98□□□□□ -0.17
ZKSCAN4-201ENST00000377294 DGCR6Q14129 220 aa13.98□□□□□ -0.17
ZKSCAN4-201ENST00000377294 ZNF77Q15935 545 aa13.98□□□□□ -0.17
ZKSCAN4-201ENST00000377294 PRSS53Q2L4Q9 553 aa13.98□□□□□ -0.17
ZKSCAN4-201ENST00000377294 ZNF284Q2VY69 593 aa13.98□□□□□ -0.17
ZKSCAN4-201ENST00000377294 LIPIQ6XZB0 460 aa13.98□□□□□ -0.17
ZKSCAN4-201ENST00000377294 GRASPQ7Z6J2 395 aaPredicted RBP13.98□□□□□ -0.17
ZKSCAN4-201ENST00000377294 SNX29P2Q8IUI4 249 aa13.98□□□□□ -0.17
ZKSCAN4-201ENST00000377294 RASGRP3Q8IV61 690 aa13.98□□□□□ -0.17
ZKSCAN4-201ENST00000377294 CFAP206Q8IYR0 622 aa13.98□□□□□ -0.17
ZKSCAN4-201ENST00000377294 ZNF740Q8NDX6 193 aa13.98□□□□□ -0.17
ZKSCAN4-201ENST00000377294 WDR48Q8TAF3 677 aa13.98□□□□□ -0.17
ZKSCAN4-201ENST00000377294 MIPOL1Q8TD10 442 aa13.98□□□□□ -0.17
ZKSCAN4-201ENST00000377294 ZNF480Q8WV37 535 aa13.98□□□□□ -0.17
ZKSCAN4-201ENST00000377294 MUL1Q969V5 352 aa13.98□□□□□ -0.17
ZKSCAN4-201ENST00000377294 C11orf24Q96F05 449 aaPredicted RBP13.98□□□□□ -0.17
ZKSCAN4-201ENST00000377294 OR2AG1Q9H205 316 aa13.98□□□□□ -0.17
ZKSCAN4-201ENST00000377294 OR51B5Q9H339 312 aa13.98□□□□□ -0.17
ZKSCAN4-201ENST00000377294 TCF20Q9UGU0 1960 aaKnown RBP13.98□□□□□ -0.17
ZKSCAN4-201ENST00000377294 SLC5A10A0PJK1 596 aa13.98□□□□□ -0.17
ZKSCAN4-201ENST00000377294 SLC16A6O15403 523 aa13.98□□□□□ -0.17
ZKSCAN4-201ENST00000377294 SPINT1O43278 529 aa13.98□□□□□ -0.17
ZKSCAN4-201ENST00000377294 ATG13O75143 517 aa13.98□□□□□ -0.17
ZKSCAN4-201ENST00000377294 BCAS1O75363 584 aaPredicted RBP13.98□□□□□ -0.17
ZKSCAN4-201ENST00000377294 BCL10O95999 233 aa13.98□□□□□ -0.17
ZKSCAN4-201ENST00000377294 ETFAP13804 333 aa13.98□□□□□ -0.17
ZKSCAN4-201ENST00000377294 GPX2P18283 190 aa13.98□□□□□ -0.17
ZKSCAN4-201ENST00000377294 IRS1P35568 1242 aa13.98□□□□□ -0.17
ZKSCAN4-201ENST00000377294 MMP12P39900 470 aa13.98□□□□□ -0.17
ZKSCAN4-201ENST00000377294 OR1E2P47887 323 aa13.98□□□□□ -0.17
ZKSCAN4-201ENST00000377294 MASP1P48740 699 aa13.98□□□□□ -0.17
ZKSCAN4-201ENST00000377294 RAD23AP54725 363 aa13.98□□□□□ -0.17
ZKSCAN4-201ENST00000377294 CPTPQ5TA50 214 aa13.98□□□□□ -0.17
ZKSCAN4-201ENST00000377294 ZDHHC20Q5W0Z9 365 aa13.98□□□□□ -0.17
ZKSCAN4-201ENST00000377294 GRHL2Q6ISB3 625 aa13.98□□□□□ -0.17
ZKSCAN4-201ENST00000377294 CRTC3Q6UUV7 619 aa13.98□□□□□ -0.17
ZKSCAN4-201ENST00000377294 SYTL1Q8IYJ3 562 aa13.98□□□□□ -0.17
ZKSCAN4-201ENST00000377294 REM2Q8IYK8 340 aaPredicted RBP13.98□□□□□ -0.17
ZKSCAN4-201ENST00000377294 FAR1Q8WVX9 515 aa13.98□□□□□ -0.17
ZKSCAN4-201ENST00000377294 NXPE3Q969Y0 559 aa13.98□□□□□ -0.17
ZKSCAN4-201ENST00000377294 IL17FQ96PD4 163 aa13.98□□□□□ -0.17
ZKSCAN4-201ENST00000377294 ALOXE3Q9BYJ1 711 aa13.98□□□□□ -0.17
ZKSCAN4-201ENST00000377294 TRIM39Q9HCM9 518 aa13.98□□□□□ -0.17
ZKSCAN4-201ENST00000377294 GPATCH2Q9NW75 528 aa13.98□□□□□ -0.17
ZKSCAN4-201ENST00000377294 RUVBL1Q9Y265 456 aaKnown RBP13.98□□□□□ -0.17
ZKSCAN4-201ENST00000377294 SNX5Q9Y5X3 404 aa13.98□□□□□ -0.17
ZKSCAN4-201ENST00000377294 PLXND1Q9Y4D7 1925 aa13.98□□□□□ -0.17
ZKSCAN4-201ENST00000377294 KIAA0100Q14667 2235 aaKnown RBP13.98□□□□□ -0.17
ZKSCAN4-201ENST00000377294 FADS2O95864 444 aaKnown RBP13.97□□□□□ -0.17
ZKSCAN4-201ENST00000377294 CEBPBP17676 345 aa13.97□□□□□ -0.17
ZKSCAN4-201ENST00000377294 IDSP22304 550 aa13.97□□□□□ -0.17
ZKSCAN4-201ENST00000377294 TRPC1P48995 793 aa13.97□□□□□ -0.17
ZKSCAN4-201ENST00000377294 TMBIM6P55061 237 aa13.97□□□□□ -0.17
ZKSCAN4-201ENST00000377294 SRSF11Q05519 484 aaKnown RBP13.97□□□□□ -0.17
ZKSCAN4-201ENST00000377294 KDM4DQ6B0I6 523 aa13.97□□□□□ -0.17
ZKSCAN4-201ENST00000377294 TSEN54Q7Z6J9 526 aaKnown RBP13.97□□□□□ -0.17
ZKSCAN4-201ENST00000377294 CACUL1Q86Y37 369 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms