RNA–Protein interactions for RNA: ENST00000376561.7

CTTN-203, Transcript of cortactin, humanhuman

TSL 1 (best) BASIC

Gene CTTN, Length 2,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-203ENST00000376561 MSRB3Q8IXL7 192 aa16.98■□□□□ 0.31
CTTN-203ENST00000376561 SLC22A18ASQ8N1D0 253 aa16.98■□□□□ 0.31
CTTN-203ENST00000376561 FRMD1Q8N878 549 aa16.98■□□□□ 0.31
CTTN-203ENST00000376561 OR7A2PQ8NGA2 310 aa16.98■□□□□ 0.31
CTTN-203ENST00000376561 RHBGQ9H310 441 aa16.98■□□□□ 0.31
CTTN-203ENST00000376561 TRNAU1APQ9NX07 287 aaKnown RBP16.98■□□□□ 0.31
CTTN-203ENST00000376561 C6orf203Q9P0P8 240 aaPredicted RBP16.98■□□□□ 0.31
CTTN-203ENST00000376561 DMTF1Q9Y222 760 aa16.98■□□□□ 0.31
CTTN-203ENST00000376561 PCDHB11Q9Y5F2 797 aa16.98■□□□□ 0.31
CTTN-203ENST00000376561 HEATR5BQ9P2D3 2071 aa16.98■□□□□ 0.31
CTTN-203ENST00000376561 PRSS51A0A1B0GVH4 220 aa16.98■□□□□ 0.31
CTTN-203ENST00000376561 GNG14A0A1W2PPG7 69 aa16.98■□□□□ 0.31
CTTN-203ENST00000376561 SAP18O00422 153 aaKnown RBP16.98■□□□□ 0.31
CTTN-203ENST00000376561 ERN1O75460 977 aaKnown RBP16.98■□□□□ 0.31
CTTN-203ENST00000376561 GRIA3P42263 894 aa16.98■□□□□ 0.31
CTTN-203ENST00000376561 REEP5Q00765 189 aa16.98■□□□□ 0.31
CTTN-203ENST00000376561 MUM1Q2TAK8 710 aa16.98■□□□□ 0.31
CTTN-203ENST00000376561 LRIF1Q5T3J3 769 aa16.98■□□□□ 0.31
CTTN-203ENST00000376561 LCN8Q6JVE9 175 aa16.98■□□□□ 0.31
CTTN-203ENST00000376561 MSANTD1Q6ZTZ1 278 aa16.98■□□□□ 0.31
CTTN-203ENST00000376561 ANKRD46Q86W74 232 aa16.98■□□□□ 0.31
CTTN-203ENST00000376561 PHACTR4Q8IZ21 702 aa16.98■□□□□ 0.31
CTTN-203ENST00000376561 ANKRD53Q8N9V6 530 aa16.98■□□□□ 0.31
CTTN-203ENST00000376561 RLN3Q8WXF3 142 aa16.98■□□□□ 0.31
CTTN-203ENST00000376561 STARD8Q92502 1023 aa16.98■□□□□ 0.31
CTTN-203ENST00000376561 ITCHQ96J02 903 aa16.98■□□□□ 0.31
CTTN-203ENST00000376561 TPSD1Q9BZJ3 242 aa16.98■□□□□ 0.31
CTTN-203ENST00000376561 FOXQ1Q9C009 403 aa16.98■□□□□ 0.31
CTTN-203ENST00000376561 REXO4Q9GZR2 422 aaKnown RBP16.98■□□□□ 0.31
CTTN-203ENST00000376561 PAIP1Q9H074 479 aaKnown RBP16.98■□□□□ 0.31
CTTN-203ENST00000376561 MUC13Q9H3R2 512 aa16.98■□□□□ 0.31
CTTN-203ENST00000376561 KIR3DX1Q9H7L2 352 aa16.98■□□□□ 0.31
CTTN-203ENST00000376561 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.98■□□□□ 0.31
CTTN-203ENST00000376561 ADGRE2Q9UHX3 823 aa16.98■□□□□ 0.31
CTTN-203ENST00000376561 TRBV5-3A0A0A0MS03 114 aa16.97■□□□□ 0.31
CTTN-203ENST00000376561 ANKDD1BA6NHY2 528 aa16.97■□□□□ 0.31
CTTN-203ENST00000376561 FAM170BA6NMN3 283 aa16.97■□□□□ 0.31
CTTN-203ENST00000376561 ARPC2O15144 300 aa16.97■□□□□ 0.31
CTTN-203ENST00000376561 B3GALT4O96024 378 aa16.97■□□□□ 0.31
CTTN-203ENST00000376561 COX7A2P14406 83 aa16.97■□□□□ 0.31
CTTN-203ENST00000376561 PTX3P26022 381 aaPredicted RBP16.97■□□□□ 0.31
CTTN-203ENST00000376561 HTR1EP28566 365 aa16.97■□□□□ 0.31
CTTN-203ENST00000376561 STARD6P59095 220 aa16.97■□□□□ 0.31
CTTN-203ENST00000376561 HKDC1Q2TB90 917 aa16.97■□□□□ 0.31
CTTN-203ENST00000376561 METTL4Q8N3J2 472 aa16.97■□□□□ 0.31
CTTN-203ENST00000376561 OR8J2Q8NGG1 315 aa16.97■□□□□ 0.31
CTTN-203ENST00000376561 DUS3LQ96G46 650 aaKnown RBP16.97■□□□□ 0.31
CTTN-203ENST00000376561 TRIM15Q9C019 465 aa16.97■□□□□ 0.31
CTTN-203ENST00000376561 SLC6A13Q9NSD5 602 aa16.97■□□□□ 0.31
CTTN-203ENST00000376561 ZNF624Q9P2J8 865 aaPredicted RBP16.97■□□□□ 0.31
CTTN-203ENST00000376561 WNT16Q9UBV4 365 aa16.97■□□□□ 0.31
CTTN-203ENST00000376561 FBXL21Q9UKT6 434 aa16.97■□□□□ 0.31
CTTN-203ENST00000376561 USP22Q9UPT9 525 aa16.97■□□□□ 0.31
CTTN-203ENST00000376561 PCDHB14Q9Y5E9 798 aa16.97■□□□□ 0.31
CTTN-203ENST00000376561 FANCMQ8IYD8 2048 aa16.97■□□□□ 0.31
CTTN-203ENST00000376561 A0A096LPI6 279 aa16.97■□□□□ 0.31
CTTN-203ENST00000376561 FEZF1A0PJY2 475 aa16.97■□□□□ 0.31
CTTN-203ENST00000376561 SCAMP2O15127 329 aaKnown RBP16.97■□□□□ 0.31
CTTN-203ENST00000376561 KDM1AO60341 852 aa16.97■□□□□ 0.31
CTTN-203ENST00000376561 ZNF217O75362 1048 aa16.97■□□□□ 0.31
CTTN-203ENST00000376561 NDUFS1P28331 727 aa16.97■□□□□ 0.31
CTTN-203ENST00000376561 FXNQ16595 210 aa16.97■□□□□ 0.31
CTTN-203ENST00000376561 PUS10Q3MIT2 529 aaKnown RBP16.97■□□□□ 0.31
CTTN-203ENST00000376561 GTDC1Q4AE62 458 aa16.97■□□□□ 0.31
CTTN-203ENST00000376561 RUNDC3AQ59EK9 446 aa16.97■□□□□ 0.31
CTTN-203ENST00000376561 SPPL2CQ8IUH8 684 aa16.97■□□□□ 0.31
CTTN-203ENST00000376561 FAM160A2Q8N612 972 aaPredicted RBP16.97■□□□□ 0.31
CTTN-203ENST00000376561 DNAJC9Q8WXX5 260 aa16.97■□□□□ 0.31
CTTN-203ENST00000376561 INPP5KQ9BT40 448 aa16.97■□□□□ 0.31
CTTN-203ENST00000376561 PITHD1Q9GZP4 211 aaPredicted RBP16.97■□□□□ 0.31
CTTN-203ENST00000376561 PIF1Q9H611 641 aa16.97■□□□□ 0.31
CTTN-203ENST00000376561 NT5DC2Q9H857 520 aa16.97■□□□□ 0.31
CTTN-203ENST00000376561 MAPRE3Q9UPY8 281 aa16.97■□□□□ 0.31
CTTN-203ENST00000376561 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.97■□□□□ 0.31
CTTN-203ENST00000376561 SNX13Q9Y5W8 968 aa16.97■□□□□ 0.31
CTTN-203ENST00000376561 DGKBQ9Y6T7 804 aa16.97■□□□□ 0.31
CTTN-203ENST00000376561 IGHV1OR15-9A0A0B4J2B8 117 aa16.96■□□□□ 0.31
CTTN-203ENST00000376561 IGKV1-8A0A0C4DH67 115 aa16.96■□□□□ 0.31
CTTN-203ENST00000376561 A6NCN8 305 aa16.96■□□□□ 0.31
CTTN-203ENST00000376561 AQP12BA6NM10 295 aa16.96■□□□□ 0.31
CTTN-203ENST00000376561 CASQ2O14958 399 aaPredicted RBP16.96■□□□□ 0.31
CTTN-203ENST00000376561 PRICKLE3O43900 615 aaPredicted RBP16.96■□□□□ 0.31
CTTN-203ENST00000376561 TBX6O95947 436 aaPredicted RBP16.96■□□□□ 0.31
CTTN-203ENST00000376561 PTPN6P29350 595 aa16.96■□□□□ 0.31
CTTN-203ENST00000376561 WNT3P56703 355 aa16.96■□□□□ 0.31
CTTN-203ENST00000376561 CSNK1G2P78368 415 aa16.96■□□□□ 0.31
CTTN-203ENST00000376561 ZNF763Q0D2J5 394 aa16.96■□□□□ 0.31
CTTN-203ENST00000376561 TAF11Q15544 211 aa16.96■□□□□ 0.31
CTTN-203ENST00000376561 NRROSQ86YC3 692 aa16.96■□□□□ 0.31
CTTN-203ENST00000376561 AQP12AQ8IXF9 295 aa16.96■□□□□ 0.31
CTTN-203ENST00000376561 WDR48Q8TAF3 677 aa16.96■□□□□ 0.31
CTTN-203ENST00000376561 SHDQ96IW2 340 aa16.96■□□□□ 0.31
CTTN-203ENST00000376561 ECSITQ9BQ95 431 aa16.96■□□□□ 0.31
CTTN-203ENST00000376561 THUMPD3Q9BV44 507 aaKnown RBP16.96■□□□□ 0.31
CTTN-203ENST00000376561 IKZF5Q9H5V7 419 aa16.96■□□□□ 0.31
CTTN-203ENST00000376561 COPS7BQ9H9Q2 264 aaPredicted RBP16.96■□□□□ 0.31
CTTN-203ENST00000376561 BTBD3Q9Y2F9 522 aa16.96■□□□□ 0.31
CTTN-203ENST00000376561 AP4S1Q9Y587 144 aa16.96■□□□□ 0.31
CTTN-203ENST00000376561 SCN2BO60939 215 aa16.96■□□□□ 0.3
CTTN-203ENST00000376561 GBAP04062 536 aa16.96■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms