RNA–Protein interactions for RNA: ENST00000375820.8

COL4A1-201, Transcript of collagen type IV alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A1, Length 6,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-201ENST00000375820 KAT7O95251 611 aa13.34□□□□□ -0.27
COL4A1-201ENST00000375820 MAD2L1BPQ15013 274 aaPredicted RBP13.34□□□□□ -0.27
COL4A1-201ENST00000375820 WASH2PQ6VEQ5 465 aa13.34□□□□□ -0.27
COL4A1-201ENST00000375820 LRRC3Q9BY71 257 aa13.34□□□□□ -0.27
COL4A1-201ENST00000375820 C14orf105Q9NVL8 296 aa13.34□□□□□ -0.27
COL4A1-201ENST00000375820 NOCTQ9UK39 431 aaKnown RBP13.34□□□□□ -0.27
COL4A1-201ENST00000375820 RNF11Q9Y3C5 154 aa13.34□□□□□ -0.27
COL4A1-201ENST00000375820 PLATP00750 562 aa13.33□□□□□ -0.27
COL4A1-201ENST00000375820 TACSTD2P09758 323 aa13.33□□□□□ -0.27
COL4A1-201ENST00000375820 CBLBQ13191 982 aa13.33□□□□□ -0.27
COL4A1-201ENST00000375820 ALG10Q5BKT4 473 aa13.33□□□□□ -0.27
COL4A1-201ENST00000375820 NKAPLQ5M9Q1 402 aa13.33□□□□□ -0.27
COL4A1-201ENST00000375820 C6orf183Q5T699 404 aa13.33□□□□□ -0.27
COL4A1-201ENST00000375820 NCBP2-AS2Q69YL0 99 aa13.33□□□□□ -0.27
COL4A1-201ENST00000375820 SLC25A25Q6KCM7 469 aa13.33□□□□□ -0.27
COL4A1-201ENST00000375820 GOLGA7Q7Z5G4 137 aa13.33□□□□□ -0.27
COL4A1-201ENST00000375820 FBXL12Q9NXK8 326 aa13.33□□□□□ -0.27
COL4A1-201ENST00000375820 ITGB1BP2Q9UKP3 347 aa13.33□□□□□ -0.27
COL4A1-201ENST00000375820 ABCA9Q8IUA7 1624 aa13.33□□□□□ -0.28
COL4A1-201ENST00000375820 TEX13DA0A0J9YY54 714 aaPredicted RBP13.33□□□□□ -0.28
COL4A1-201ENST00000375820 PRORSD1PA6NEY8 169 aa13.33□□□□□ -0.28
COL4A1-201ENST00000375820 KCNJ13O60928 360 aa13.33□□□□□ -0.28
COL4A1-201ENST00000375820 C6orf47O95873 294 aa13.33□□□□□ -0.28
COL4A1-201ENST00000375820 PREPP48147 710 aa13.33□□□□□ -0.28
COL4A1-201ENST00000375820 CD300LFQ8TDQ1 290 aa13.33□□□□□ -0.28
COL4A1-201ENST00000375820 CCM2Q9BSQ5 444 aa13.33□□□□□ -0.28
COL4A1-201ENST00000375820 SLC22A4Q9H015 551 aa13.33□□□□□ -0.28
COL4A1-201ENST00000375820 RNF39Q9H2S5 420 aa13.33□□□□□ -0.28
COL4A1-201ENST00000375820 POLE4Q9NR33 117 aa13.33□□□□□ -0.28
COL4A1-201ENST00000375820 SPATA7Q9P0W8 599 aa13.33□□□□□ -0.28
COL4A1-201ENST00000375820 PCDHGB7Q9Y5F8 929 aa13.33□□□□□ -0.28
COL4A1-201ENST00000375820 H3BNX3 289 aa13.33□□□□□ -0.28
COL4A1-201ENST00000375820 CLEC3AO75596 197 aa13.33□□□□□ -0.28
COL4A1-201ENST00000375820 H6PDO95479 791 aa13.33□□□□□ -0.28
COL4A1-201ENST00000375820 CHRM1P11229 460 aaPredicted RBP13.33□□□□□ -0.28
COL4A1-201ENST00000375820 CDH1P12830 882 aa13.33□□□□□ -0.28
COL4A1-201ENST00000375820 ATP1B2P14415 290 aaPredicted RBP13.33□□□□□ -0.28
COL4A1-201ENST00000375820 BLKP51451 505 aa13.33□□□□□ -0.28
COL4A1-201ENST00000375820 OR4F6Q8NGB9 312 aa13.33□□□□□ -0.28
COL4A1-201ENST00000375820 BORCS8Q96FH0 119 aa13.33□□□□□ -0.28
COL4A1-201ENST00000375820 ITM2CQ9NQX7 267 aa13.33□□□□□ -0.28
COL4A1-201ENST00000375820 PIGVQ9NUD9 493 aa13.33□□□□□ -0.28
COL4A1-201ENST00000375820 WRAP73Q9P2S5 460 aaPredicted RBP13.33□□□□□ -0.28
COL4A1-201ENST00000375820 DKKL1Q9UK85 242 aa13.33□□□□□ -0.28
COL4A1-201ENST00000375820 RPL26L1Q9UNX3 145 aaKnown RBP13.33□□□□□ -0.28
COL4A1-201ENST00000375820 TLR6Q9Y2C9 796 aa13.33□□□□□ -0.28
COL4A1-201ENST00000375820 SQORQ9Y6N5 450 aa13.33□□□□□ -0.28
COL4A1-201ENST00000375820 C9J4A7 227 aa13.33□□□□□ -0.28
COL4A1-201ENST00000375820 SLC7A4O43246 635 aa13.33□□□□□ -0.28
COL4A1-201ENST00000375820 H1F0P07305 194 aaKnown RBP13.33□□□□□ -0.28
COL4A1-201ENST00000375820 GNAO1P09471 354 aa13.33□□□□□ -0.28
COL4A1-201ENST00000375820 GATMP50440 423 aa13.33□□□□□ -0.28
COL4A1-201ENST00000375820 SLC22A16Q86VW1 577 aa13.33□□□□□ -0.28
COL4A1-201ENST00000375820 CMTM8Q8IZV2 173 aa13.33□□□□□ -0.28
COL4A1-201ENST00000375820 TMCO6Q96DC7 493 aa13.33□□□□□ -0.28
COL4A1-201ENST00000375820 FBXL20Q96IG2 436 aa13.33□□□□□ -0.28
COL4A1-201ENST00000375820 TUBGCP5Q96RT8 1024 aa13.33□□□□□ -0.28
COL4A1-201ENST00000375820 PLCL2Q9UPR0 1127 aa13.33□□□□□ -0.28
COL4A1-201ENST00000375820 A8MT66 165 aa13.33□□□□□ -0.28
COL4A1-201ENST00000375820 IMPDH1P20839 514 aa13.33□□□□□ -0.28
COL4A1-201ENST00000375820 MATN1P21941 496 aa13.33□□□□□ -0.28
COL4A1-201ENST00000375820 RPP38P78345 283 aaKnown RBP13.33□□□□□ -0.28
COL4A1-201ENST00000375820 MEP1AQ16819 746 aa13.33□□□□□ -0.28
COL4A1-201ENST00000375820 LACTB2Q53H82 288 aaPredicted RBP13.33□□□□□ -0.28
COL4A1-201ENST00000375820 TMEM139Q8IV31 216 aa13.33□□□□□ -0.28
COL4A1-201ENST00000375820 SLC5A7Q9GZV3 580 aa13.33□□□□□ -0.28
COL4A1-201ENST00000375820 ZDHHC3Q9NYG2 299 aa13.33□□□□□ -0.28
COL4A1-201ENST00000375820 UPK3BL1B0FP48 263 aa13.32□□□□□ -0.28
COL4A1-201ENST00000375820 UPK3BL2E5RIL1 263 aa13.32□□□□□ -0.28
COL4A1-201ENST00000375820 HMGB3O15347 200 aaKnown RBP13.32□□□□□ -0.28
COL4A1-201ENST00000375820 HCAR3P49019 387 aa13.32□□□□□ -0.28
COL4A1-201ENST00000375820 NNATQ16517 81 aa13.32□□□□□ -0.28
COL4A1-201ENST00000375820 ANKDD1AQ495B1 522 aa13.32□□□□□ -0.28
COL4A1-201ENST00000375820 CLEC4DQ8WXI8 215 aa13.32□□□□□ -0.28
COL4A1-201ENST00000375820 ZNF516Q92618 1163 aa13.32□□□□□ -0.28
COL4A1-201ENST00000375820 TMEM209Q96SK2 561 aa13.32□□□□□ -0.28
COL4A1-201ENST00000375820 FUZQ9BT04 418 aa13.32□□□□□ -0.28
COL4A1-201ENST00000375820 CLIC3O95833 236 aa13.32□□□□□ -0.28
COL4A1-201ENST00000375820 PRLP01236 227 aa13.32□□□□□ -0.28
COL4A1-201ENST00000375820 GRPRP30550 384 aa13.32□□□□□ -0.28
COL4A1-201ENST00000375820 DNAJA1P31689 397 aaKnown RBP13.32□□□□□ -0.28
COL4A1-201ENST00000375820 ENTPD1P49961 510 aa13.32□□□□□ -0.28
COL4A1-201ENST00000375820 DAG1Q14118 895 aa13.32□□□□□ -0.28
COL4A1-201ENST00000375820 FBXL22Q6P050 247 aa13.32□□□□□ -0.28
COL4A1-201ENST00000375820 BOLLQ8N9W6 283 aaKnown RBP13.32□□□□□ -0.28
COL4A1-201ENST00000375820 MFSD2AQ8NA29 543 aa13.32□□□□□ -0.28
COL4A1-201ENST00000375820 OR6N1Q8NGY5 312 aa13.32□□□□□ -0.28
COL4A1-201ENST00000375820 RAB8BQ92930 207 aa13.32□□□□□ -0.28
COL4A1-201ENST00000375820 DCSTAMPQ9H295 470 aa13.32□□□□□ -0.28
COL4A1-201ENST00000375820 TFB2MQ9H5Q4 396 aaKnown RBP13.32□□□□□ -0.28
COL4A1-201ENST00000375820 HIF3AQ9Y2N7 669 aa13.32□□□□□ -0.28
COL4A1-201ENST00000375820 MRPS17Q9Y2R5 130 aaKnown RBP13.32□□□□□ -0.28
COL4A1-201ENST00000375820 DIP2CQ9Y2E4 1556 aa13.32□□□□□ -0.28
COL4A1-201ENST00000375820 RNF13O43567 381 aa13.32□□□□□ -0.28
COL4A1-201ENST00000375820 LYPLA2O95372 231 aa13.32□□□□□ -0.28
COL4A1-201ENST00000375820 SOX2P48431 317 aa13.32□□□□□ -0.28
COL4A1-201ENST00000375820 TMEM17Q86X19 198 aa13.32□□□□□ -0.28
COL4A1-201ENST00000375820 SLC37A3Q8NCC5 494 aa13.32□□□□□ -0.28
COL4A1-201ENST00000375820 ORAI3Q9BRQ5 295 aa13.32□□□□□ -0.28
COL4A1-201ENST00000375820 CCDC86Q9H6F5 360 aaKnown RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms