RNA–Protein interactions for RNA: ENST00000374481.7

CD28-202, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 4,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-202ENST00000374481 ZNF768Q9H5H4 540 aaKnown RBP9.95□□□□□ -0.82
CD28-202ENST00000374481 MED1Q15648 1581 aaPredicted RBP9.95□□□□□ -0.82
CD28-202ENST00000374481 CIB4A0PJX0 185 aa9.95□□□□□ -0.82
CD28-202ENST00000374481 OR6C74A6NCV1 312 aa9.95□□□□□ -0.82
CD28-202ENST00000374481 RRN3P2A6NIE6 340 aa9.95□□□□□ -0.82
CD28-202ENST00000374481 CBX4O00257 560 aa9.95□□□□□ -0.82
CD28-202ENST00000374481 SCAMP3O14828 347 aaKnown RBP9.95□□□□□ -0.82
CD28-202ENST00000374481 LCMT2O60294 686 aaKnown RBP9.95□□□□□ -0.82
CD28-202ENST00000374481 SPDEFO95238 335 aa9.95□□□□□ -0.82
CD28-202ENST00000374481 ZNF7P17097 686 aaPredicted RBP9.95□□□□□ -0.82
CD28-202ENST00000374481 CSKP41240 450 aa9.95□□□□□ -0.82
CD28-202ENST00000374481 RPS14P62263 151 aaKnown RBP9.95□□□□□ -0.82
CD28-202ENST00000374481 PTGR1Q14914 329 aa9.95□□□□□ -0.82
CD28-202ENST00000374481 NXNL2Q5VZ03 156 aa9.95□□□□□ -0.82
CD28-202ENST00000374481 HHIPL2Q6UWX4 724 aa9.95□□□□□ -0.82
CD28-202ENST00000374481 NEIL3Q8TAT5 605 aa9.95□□□□□ -0.82
CD28-202ENST00000374481 C10orf90Q96M02 699 aa9.95□□□□□ -0.82
CD28-202ENST00000374481 SPATA33Q96N06 139 aa9.95□□□□□ -0.82
CD28-202ENST00000374481 KLHL5Q96PQ7 755 aa9.95□□□□□ -0.82
CD28-202ENST00000374481 ELAC1Q9H777 363 aaKnown RBP9.95□□□□□ -0.82
CD28-202ENST00000374481 KLHL28Q9NXS3 571 aa9.95□□□□□ -0.82
CD28-202ENST00000374481 GALPQ9UBC7 116 aa9.95□□□□□ -0.82
CD28-202ENST00000374481 CBY1Q9Y3M2 126 aa9.95□□□□□ -0.82
CD28-202ENST00000374481 DNAJC15Q9Y5T4 150 aa9.95□□□□□ -0.82
CD28-202ENST00000374481 ZNF98A6NK75 572 aa9.95□□□□□ -0.82
CD28-202ENST00000374481 CDK14O94921 469 aa9.95□□□□□ -0.82
CD28-202ENST00000374481 TFP02787 698 aa9.95□□□□□ -0.82
CD28-202ENST00000374481 DRD5P21918 477 aa9.95□□□□□ -0.82
CD28-202ENST00000374481 AXLP30530 894 aa9.95□□□□□ -0.82
CD28-202ENST00000374481 ANXA11P50995 505 aaKnown RBP9.95□□□□□ -0.82
CD28-202ENST00000374481 MAXP61244 160 aa9.95□□□□□ -0.82
CD28-202ENST00000374481 LAMTOR4Q0VGL1 99 aa9.95□□□□□ -0.82
CD28-202ENST00000374481 SLC25A52Q3SY17 297 aa9.95□□□□□ -0.82
CD28-202ENST00000374481 PAGE3Q5JUK9 113 aa9.95□□□□□ -0.82
CD28-202ENST00000374481 HIST2H2AA3Q6FI13 130 aa9.95□□□□□ -0.82
CD28-202ENST00000374481 HS6ST3Q8IZP7 471 aa9.95□□□□□ -0.82
CD28-202ENST00000374481 LINC00469Q8N7U9 141 aa9.95□□□□□ -0.82
CD28-202ENST00000374481 MN1Q10571 1320 aaPredicted RBP9.95□□□□□ -0.82
CD28-202ENST00000374481 IGLV3-22A0A075B6J6 115 aa9.94□□□□□ -0.82
CD28-202ENST00000374481 CLIC1O00299 241 aa9.94□□□□□ -0.82
CD28-202ENST00000374481 MATN4O95460 622 aa9.94□□□□□ -0.82
CD28-202ENST00000374481 RAF1P04049 648 aa9.94□□□□□ -0.82
CD28-202ENST00000374481 RLN2P04090 185 aa9.94□□□□□ -0.82
CD28-202ENST00000374481 RETP07949 1114 aa9.94□□□□□ -0.82
CD28-202ENST00000374481 ANXA5P08758 320 aa9.94□□□□□ -0.82
CD28-202ENST00000374481 GPX3P22352 226 aa9.94□□□□□ -0.82
CD28-202ENST00000374481 S100PP25815 95 aa9.94□□□□□ -0.82
CD28-202ENST00000374481 HLA-DMAP28067 261 aa9.94□□□□□ -0.82
CD28-202ENST00000374481 ADRA1BP35368 520 aa9.94□□□□□ -0.82
CD28-202ENST00000374481 LIPAP38571 399 aa9.94□□□□□ -0.82
CD28-202ENST00000374481 IRF8Q02556 426 aa9.94□□□□□ -0.82
CD28-202ENST00000374481 CREMQ03060 361 aa9.94□□□□□ -0.82
CD28-202ENST00000374481 ZNF252P-AS1Q0IIN9 211 aa9.94□□□□□ -0.82
CD28-202ENST00000374481 GRIK2Q13002 908 aa9.94□□□□□ -0.82
CD28-202ENST00000374481 OPCMLQ14982 345 aa9.94□□□□□ -0.82
CD28-202ENST00000374481 SYTL3Q4VX76 610 aa9.94□□□□□ -0.82
CD28-202ENST00000374481 YIF1BQ5BJH7 314 aa9.94□□□□□ -0.82
CD28-202ENST00000374481 C6orf136Q5SQH8 315 aa9.94□□□□□ -0.82
CD28-202ENST00000374481 C1orf220Q5T0J3 134 aa9.94□□□□□ -0.82
CD28-202ENST00000374481 NCBP2-AS2Q69YL0 99 aa9.94□□□□□ -0.82
CD28-202ENST00000374481 TIGD3Q6B0B8 471 aa9.94□□□□□ -0.82
CD28-202ENST00000374481 DENND1CQ8IV53 801 aa9.94□□□□□ -0.82
CD28-202ENST00000374481 SVBPQ8N300 66 aa9.94□□□□□ -0.82
CD28-202ENST00000374481 LNX2Q8N448 690 aa9.94□□□□□ -0.82
CD28-202ENST00000374481 ZNF615Q8N8J6 731 aa9.94□□□□□ -0.82
CD28-202ENST00000374481 TMEM185AQ8NFB2 350 aa9.94□□□□□ -0.82
CD28-202ENST00000374481 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.94□□□□□ -0.82
CD28-202ENST00000374481 LENG9Q96B70 501 aa9.94□□□□□ -0.82
CD28-202ENST00000374481 CDK15Q96Q40 435 aa9.94□□□□□ -0.82
CD28-202ENST00000374481 GPR21Q99679 349 aa9.94□□□□□ -0.82
CD28-202ENST00000374481 USB1Q9BQ65 265 aaKnown RBP9.94□□□□□ -0.82
CD28-202ENST00000374481 CRB3Q9BUF7 120 aa9.94□□□□□ -0.82
CD28-202ENST00000374481 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.94□□□□□ -0.82
CD28-202ENST00000374481 OR51B5Q9H339 312 aa9.94□□□□□ -0.82
CD28-202ENST00000374481 TMEM134Q9H6X4 195 aa9.94□□□□□ -0.82
CD28-202ENST00000374481 SDR39U1Q9NRG7 319 aaPredicted RBP9.94□□□□□ -0.82
CD28-202ENST00000374481 ACOXLQ9NUZ1 547 aa9.94□□□□□ -0.82
CD28-202ENST00000374481 AIG1Q9NVV5 245 aa9.94□□□□□ -0.82
CD28-202ENST00000374481 C1orf167Q5SNV9 1468 aa9.94□□□□□ -0.82
CD28-202ENST00000374481 PITPNM1O00562 1244 aa9.94□□□□□ -0.82
CD28-202ENST00000374481 CILPO75339 1184 aa9.94□□□□□ -0.82
CD28-202ENST00000374481 FARS2O95363 451 aaKnown RBP9.94□□□□□ -0.82
CD28-202ENST00000374481 LALBAP00709 142 aa9.94□□□□□ -0.82
CD28-202ENST00000374481 HRGP04196 525 aa9.94□□□□□ -0.82
CD28-202ENST00000374481 DDX6P26196 483 aaKnown RBP eCLIP9.94□□□□□ -0.82
CD28-202ENST00000374481 PNPLA4P41247 253 aa9.94□□□□□ -0.82
CD28-202ENST00000374481 GANABQ14697 944 aaKnown RBP9.94□□□□□ -0.82
CD28-202ENST00000374481 BAK1Q16611 211 aa9.94□□□□□ -0.82
CD28-202ENST00000374481 TECRLQ5HYJ1 363 aa9.94□□□□□ -0.82
CD28-202ENST00000374481 KRBOX4Q5JUW0 171 aa9.94□□□□□ -0.82
CD28-202ENST00000374481 TBPL2Q6SJ96 375 aa9.94□□□□□ -0.82
CD28-202ENST00000374481 RBFAQ8N0V3 343 aa9.94□□□□□ -0.82
CD28-202ENST00000374481 FAM46DQ8NEK8 389 aa9.94□□□□□ -0.82
CD28-202ENST00000374481 OR6M1Q8NGM8 313 aa9.94□□□□□ -0.82
CD28-202ENST00000374481 FBXL18Q96ME1 805 aa9.94□□□□□ -0.82
CD28-202ENST00000374481 ZNF350Q9GZX5 532 aa9.94□□□□□ -0.82
CD28-202ENST00000374481 WRAP73Q9P2S5 460 aaPredicted RBP9.94□□□□□ -0.82
CD28-202ENST00000374481 GTF2A1LQ9UNN4 478 aa9.94□□□□□ -0.82
CD28-202ENST00000374481 LMO7Q8WWI1 1683 aa9.94□□□□□ -0.82
CD28-202ENST00000374481 MOXD2PA6NHM9 499 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms