RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 ZNF431Q8TF32 576 aaPredicted RBP12.5□□□□□ -0.41
PRPF4-201ENST00000374198 ESAMQ96AP7 390 aa12.5□□□□□ -0.41
PRPF4-201ENST00000374198 KLHL15Q96M94 604 aa12.5□□□□□ -0.41
PRPF4-201ENST00000374198 HEXA-AS1Q9H8Q6 139 aa12.5□□□□□ -0.41
PRPF4-201ENST00000374198 ARNT2Q9HBZ2 717 aa12.5□□□□□ -0.41
PRPF4-201ENST00000374198 GALNT9Q9HCQ5 603 aa12.5□□□□□ -0.41
PRPF4-201ENST00000374198 MRPL39Q9NYK5 338 aaKnown RBP12.5□□□□□ -0.41
PRPF4-201ENST00000374198 OGDHLQ9ULD0 1010 aa12.5□□□□□ -0.41
PRPF4-201ENST00000374198 GABRDO14764 452 aa12.5□□□□□ -0.41
PRPF4-201ENST00000374198 UBA1P22314 1058 aaKnown RBP12.5□□□□□ -0.41
PRPF4-201ENST00000374198 MAP2K6P52564 334 aa12.5□□□□□ -0.41
PRPF4-201ENST00000374198 GBX2P52951 348 aaPredicted RBP12.5□□□□□ -0.41
PRPF4-201ENST00000374198 CSTF3Q12996 717 aaKnown RBP12.5□□□□□ -0.41
PRPF4-201ENST00000374198 DOC2BQ14184 412 aa12.5□□□□□ -0.41
PRPF4-201ENST00000374198 KLHL12Q53G59 568 aa12.5□□□□□ -0.41
PRPF4-201ENST00000374198 MZT2BQ6NZ67 158 aa12.5□□□□□ -0.41
PRPF4-201ENST00000374198 OR52B6Q8NGF0 335 aa12.5□□□□□ -0.41
PRPF4-201ENST00000374198 FUBP1Q96AE4 644 aaKnown RBP12.5□□□□□ -0.41
PRPF4-201ENST00000374198 UPRTQ96BW1 309 aa12.5□□□□□ -0.41
PRPF4-201ENST00000374198 GFM1Q96RP9 751 aaKnown RBP12.5□□□□□ -0.41
PRPF4-201ENST00000374198 CPPED1Q9BRF8 314 aaPredicted RBP12.5□□□□□ -0.41
PRPF4-201ENST00000374198 DERL2Q9GZP9 239 aa12.5□□□□□ -0.41
PRPF4-201ENST00000374198 RACGAP1Q9H0H5 632 aa12.5□□□□□ -0.41
PRPF4-201ENST00000374198 RBM22Q9NW64 420 aaKnown RBP eCLIP12.5□□□□□ -0.41
PRPF4-201ENST00000374198 ZNF226Q9NYT6 803 aa12.5□□□□□ -0.41
PRPF4-201ENST00000374198 NLKQ9UBE8 527 aa12.5□□□□□ -0.41
PRPF4-201ENST00000374198 SRRDQ9UH36 339 aa12.5□□□□□ -0.41
PRPF4-201ENST00000374198 CSNK1G3Q9Y6M4 447 aa12.5□□□□□ -0.41
PRPF4-201ENST00000374198 CCDC85CA6NKD9 419 aa12.49□□□□□ -0.41
PRPF4-201ENST00000374198 CDC7O00311 574 aa12.49□□□□□ -0.41
PRPF4-201ENST00000374198 MATN3O15232 486 aa12.49□□□□□ -0.41
PRPF4-201ENST00000374198 MAFKO60675 156 aa12.49□□□□□ -0.41
PRPF4-201ENST00000374198 SLC43A1O75387 559 aa12.49□□□□□ -0.41
PRPF4-201ENST00000374198 C9P02748 559 aa12.49□□□□□ -0.41
PRPF4-201ENST00000374198 SEMG1P04279 462 aa12.49□□□□□ -0.41
PRPF4-201ENST00000374198 IL6P05231 212 aa12.49□□□□□ -0.41
PRPF4-201ENST00000374198 FAM157BP0CG42 384 aa12.49□□□□□ -0.41
PRPF4-201ENST00000374198 SLC2A3P11169 496 aa12.49□□□□□ -0.41
PRPF4-201ENST00000374198 KELP23276 732 aa12.49□□□□□ -0.41
PRPF4-201ENST00000374198 SSTR4P31391 388 aa12.49□□□□□ -0.41
PRPF4-201ENST00000374198 IDH2P48735 452 aaKnown RBP12.49□□□□□ -0.41
PRPF4-201ENST00000374198 CCT3P49368 545 aaKnown RBP12.49□□□□□ -0.41
PRPF4-201ENST00000374198 PCDH1Q08174 1060 aa12.49□□□□□ -0.41
PRPF4-201ENST00000374198 FBXO46Q6PJ61 603 aaPredicted RBP12.49□□□□□ -0.41
PRPF4-201ENST00000374198 ZZZ3Q8IYH5 903 aa12.49□□□□□ -0.41
PRPF4-201ENST00000374198 PGBD3Q8N328 593 aa12.49□□□□□ -0.41
PRPF4-201ENST00000374198 SLC37A3Q8NCC5 494 aa12.49□□□□□ -0.41
PRPF4-201ENST00000374198 B3GNT7Q8NFL0 401 aa12.49□□□□□ -0.41
PRPF4-201ENST00000374198 OR52H1Q8NGJ2 320 aa12.49□□□□□ -0.41
PRPF4-201ENST00000374198 METTL6Q8TCB7 284 aa12.49□□□□□ -0.41
PRPF4-201ENST00000374198 ST8SIA4Q92187 359 aa12.49□□□□□ -0.41
PRPF4-201ENST00000374198 KIAA1143Q96AT1 154 aaPredicted RBP12.49□□□□□ -0.41
PRPF4-201ENST00000374198 FERD3LQ96RJ6 166 aa12.49□□□□□ -0.41
PRPF4-201ENST00000374198 ZNF382Q96SR6 550 aa12.49□□□□□ -0.41
PRPF4-201ENST00000374198 MARVELD1Q9BSK0 173 aa12.49□□□□□ -0.41
PRPF4-201ENST00000374198 IFT22Q9H7X7 185 aa12.49□□□□□ -0.41
PRPF4-201ENST00000374198 DDIT4Q9NX09 232 aa12.49□□□□□ -0.41
PRPF4-201ENST00000374198 MS4A12Q9NXJ0 267 aa12.49□□□□□ -0.41
PRPF4-201ENST00000374198 RIMKLBQ9ULI2 386 aa12.49□□□□□ -0.41
PRPF4-201ENST00000374198 NDRG2Q9UN36 371 aaKnown RBP12.49□□□□□ -0.41
PRPF4-201ENST00000374198 ING4Q9UNL4 249 aa12.49□□□□□ -0.41
PRPF4-201ENST00000374198 ARPC4-TTLL3A0A0A6YYG9 625 aa12.49□□□□□ -0.41
PRPF4-201ENST00000374198 FAM240BA0A1B0GVZ2 78 aa12.49□□□□□ -0.41
PRPF4-201ENST00000374198 A0A1W2PQL4 384 aaPredicted RBP12.49□□□□□ -0.41
PRPF4-201ENST00000374198 PCDH17O14917 1159 aa12.49□□□□□ -0.41
PRPF4-201ENST00000374198 ORC5O43913 435 aa12.49□□□□□ -0.41
PRPF4-201ENST00000374198 KLK8O60259 260 aa12.49□□□□□ -0.41
PRPF4-201ENST00000374198 CYP17A1P05093 508 aa12.49□□□□□ -0.41
PRPF4-201ENST00000374198 ADRA2AP08913 450 aa12.49□□□□□ -0.41
PRPF4-201ENST00000374198 GABRB1P18505 474 aa12.49□□□□□ -0.41
PRPF4-201ENST00000374198 PXNP49023 591 aaPredicted RBP12.49□□□□□ -0.41
PRPF4-201ENST00000374198 SEMA3AQ14563 771 aa12.49□□□□□ -0.41
PRPF4-201ENST00000374198 DMC1Q14565 340 aa12.49□□□□□ -0.41
PRPF4-201ENST00000374198 COL28A1Q2UY09 1125 aa12.49□□□□□ -0.41
PRPF4-201ENST00000374198 LEXMQ3ZCV2 418 aa12.49□□□□□ -0.41
PRPF4-201ENST00000374198 ZNF648Q5T619 568 aaPredicted RBP12.49□□□□□ -0.41
PRPF4-201ENST00000374198 GDPGP1Q6ZNW5 385 aa12.49□□□□□ -0.41
PRPF4-201ENST00000374198 GHDCQ8N2G8 530 aa12.49□□□□□ -0.41
PRPF4-201ENST00000374198 DENND6BQ8NEG7 585 aa12.49□□□□□ -0.41
PRPF4-201ENST00000374198 TRAPPC12Q8WVT3 735 aa12.49□□□□□ -0.41
PRPF4-201ENST00000374198 PCNPQ8WW12 178 aaKnown RBP12.49□□□□□ -0.41
PRPF4-201ENST00000374198 RIT1Q92963 219 aa12.49□□□□□ -0.41
PRPF4-201ENST00000374198 RBPMSQ93062 196 aaKnown RBP12.49□□□□□ -0.41
PRPF4-201ENST00000374198 TNIP3Q96KP6 325 aa12.49□□□□□ -0.41
PRPF4-201ENST00000374198 OPALINQ96PE5 141 aa12.49□□□□□ -0.41
PRPF4-201ENST00000374198 OR52E6Q96RD3 313 aa12.49□□□□□ -0.41
PRPF4-201ENST00000374198 NXF3Q9H4D5 531 aaKnown RBP12.49□□□□□ -0.41
PRPF4-201ENST00000374198 HHATLQ9HCP6 504 aa12.49□□□□□ -0.41
PRPF4-201ENST00000374198 MGAT4AQ9UM21 535 aa12.49□□□□□ -0.41
PRPF4-201ENST00000374198 ZNF175Q9Y473 711 aa12.49□□□□□ -0.41
PRPF4-201ENST00000374198 CFAP20Q9Y6A4 193 aaKnown RBP12.49□□□□□ -0.41
PRPF4-201ENST00000374198 MROH6A6NGR9 719 aa12.48□□□□□ -0.41
PRPF4-201ENST00000374198 ZNF670-ZNF695F2Z2N8 137 aa12.48□□□□□ -0.41
PRPF4-201ENST00000374198 FZD6O60353 706 aa12.48□□□□□ -0.41
PRPF4-201ENST00000374198 HOXB1P14653 301 aaPredicted RBP12.48□□□□□ -0.41
PRPF4-201ENST00000374198 SLC2A4P14672 509 aa12.48□□□□□ -0.41
PRPF4-201ENST00000374198 MAN2A2P49641 1150 aa12.48□□□□□ -0.41
PRPF4-201ENST00000374198 CLCNKAP51800 687 aa12.48□□□□□ -0.41
PRPF4-201ENST00000374198 CAP1Q01518 475 aa12.48□□□□□ -0.41
PRPF4-201ENST00000374198 GNA13Q14344 377 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms