RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 KCTD7Q96MP8 289 aa13.93□□□□□ -0.18
TRAF1-201ENST00000373887 ARHGAP9Q9BRR9 750 aa13.93□□□□□ -0.18
TRAF1-201ENST00000373887 ABCD2Q9UBJ2 740 aa13.93□□□□□ -0.18
TRAF1-201ENST00000373887 PCDHGB7Q9Y5F8 929 aa13.93□□□□□ -0.18
TRAF1-201ENST00000373887 J3QLW9 94 aa13.93□□□□□ -0.18
TRAF1-201ENST00000373887 NDUFS4O43181 175 aa13.93□□□□□ -0.18
TRAF1-201ENST00000373887 ZNF19P17023 458 aa13.93□□□□□ -0.18
TRAF1-201ENST00000373887 PVALBP20472 110 aaPredicted RBP13.93□□□□□ -0.18
TRAF1-201ENST00000373887 PTNP21246 168 aa13.93□□□□□ -0.18
TRAF1-201ENST00000373887 SYT16Q17RD7 645 aa13.93□□□□□ -0.18
TRAF1-201ENST00000373887 CNPY1Q3B7I2 92 aa13.93□□□□□ -0.18
TRAF1-201ENST00000373887 DUSP26Q9BV47 211 aa13.93□□□□□ -0.18
TRAF1-201ENST00000373887 BEX2Q9BXY8 128 aa13.93□□□□□ -0.18
TRAF1-201ENST00000373887 TTTY10Q9BZA0 68 aa13.93□□□□□ -0.18
TRAF1-201ENST00000373887 BEX1Q9HBH7 125 aa13.93□□□□□ -0.18
TRAF1-201ENST00000373887 WASHC1A8K0Z3 465 aa13.92□□□□□ -0.18
TRAF1-201ENST00000373887 PPM1BO75688 479 aa13.92□□□□□ -0.18
TRAF1-201ENST00000373887 CH25HO95992 272 aa13.92□□□□□ -0.18
TRAF1-201ENST00000373887 OPN1SWP03999 348 aa13.92□□□□□ -0.18
TRAF1-201ENST00000373887 PBX1P40424 430 aa13.92□□□□□ -0.18
TRAF1-201ENST00000373887 LIMK2P53671 638 aa13.92□□□□□ -0.18
TRAF1-201ENST00000373887 MYLK3Q32MK0 819 aa13.92□□□□□ -0.18
TRAF1-201ENST00000373887 WASH2PQ6VEQ5 465 aa13.92□□□□□ -0.18
TRAF1-201ENST00000373887 TMEM130Q8N3G9 435 aa13.92□□□□□ -0.18
TRAF1-201ENST00000373887 THEM6Q8WUY1 208 aa13.92□□□□□ -0.18
TRAF1-201ENST00000373887 EZH1Q92800 747 aaPredicted RBP13.92□□□□□ -0.18
TRAF1-201ENST00000373887 ZNF347Q96SE7 839 aa13.92□□□□□ -0.18
TRAF1-201ENST00000373887 NTPCRQ9BSD7 190 aaKnown RBP13.92□□□□□ -0.18
TRAF1-201ENST00000373887 PCDHAC1Q9H158 963 aa13.92□□□□□ -0.18
TRAF1-201ENST00000373887 SIX2Q9NPC8 291 aa13.92□□□□□ -0.18
TRAF1-201ENST00000373887 C14orf166Q9Y224 244 aaKnown RBP13.92□□□□□ -0.18
TRAF1-201ENST00000373887 RPL36Q9Y3U8 105 aaKnown RBP13.92□□□□□ -0.18
TRAF1-201ENST00000373887 MATN2O00339 956 aa13.92□□□□□ -0.18
TRAF1-201ENST00000373887 GJB5O95377 273 aa13.92□□□□□ -0.18
TRAF1-201ENST00000373887 IQCF3P0C7M6 154 aa13.92□□□□□ -0.18
TRAF1-201ENST00000373887 HSD3B1P14060 373 aa13.92□□□□□ -0.18
TRAF1-201ENST00000373887 GRIA1P42261 906 aa13.92□□□□□ -0.18
TRAF1-201ENST00000373887 GHRHRQ02643 423 aa13.92□□□□□ -0.18
TRAF1-201ENST00000373887 RHEBQ15382 184 aa13.92□□□□□ -0.18
TRAF1-201ENST00000373887 NPY5RQ15761 445 aa13.92□□□□□ -0.18
TRAF1-201ENST00000373887 C6orf183Q5T699 404 aa13.92□□□□□ -0.18
TRAF1-201ENST00000373887 OR8S1Q8NH09 359 aa13.92□□□□□ -0.18
TRAF1-201ENST00000373887 ZNF461Q8TAF7 563 aa13.92□□□□□ -0.18
TRAF1-201ENST00000373887 SLC13A3Q8WWT9 602 aa13.92□□□□□ -0.18
TRAF1-201ENST00000373887 IRF7Q92985 503 aa13.92□□□□□ -0.18
TRAF1-201ENST00000373887 C1orf109Q9NX04 203 aa13.92□□□□□ -0.18
TRAF1-201ENST00000373887 HCKP08631 526 aa13.92□□□□□ -0.18
TRAF1-201ENST00000373887 PTGER3P43115 390 aa13.92□□□□□ -0.18
TRAF1-201ENST00000373887 NCBP2-AS2Q69YL0 99 aa13.92□□□□□ -0.18
TRAF1-201ENST00000373887 ROPN1LQ96C74 230 aa13.92□□□□□ -0.18
TRAF1-201ENST00000373887 TBL1XR1Q9BZK7 514 aa13.92□□□□□ -0.18
TRAF1-201ENST00000373887 ERVK-18Q9QC07 812 aa13.92□□□□□ -0.18
TRAF1-201ENST00000373887 ZNF282Q9UDV7 671 aaPredicted RBP13.92□□□□□ -0.18
TRAF1-201ENST00000373887 SCML2Q9UQR0 700 aa13.92□□□□□ -0.18
TRAF1-201ENST00000373887 CRISP3P54108 245 aa13.92□□□□□ -0.18
TRAF1-201ENST00000373887 MAD2L1BPQ15013 274 aaPredicted RBP13.92□□□□□ -0.18
TRAF1-201ENST00000373887 TXNRD3NBQ6F5E7 133 aa13.92□□□□□ -0.18
TRAF1-201ENST00000373887 ARSKQ6UWY0 536 aa13.92□□□□□ -0.18
TRAF1-201ENST00000373887 ZNF227Q86WZ6 799 aa13.92□□□□□ -0.18
TRAF1-201ENST00000373887 C12orf43Q96C57 262 aaKnown RBP13.92□□□□□ -0.18
TRAF1-201ENST00000373887 A0A0D9SEW6 157 aa13.92□□□□□ -0.18
TRAF1-201ENST00000373887 TLR4O00206 839 aa13.92□□□□□ -0.18
TRAF1-201ENST00000373887 DNAJA2O60884 412 aa13.92□□□□□ -0.18
TRAF1-201ENST00000373887 CNTN5O94779 1100 aa13.92□□□□□ -0.18
TRAF1-201ENST00000373887 RAP2AP10114 183 aa13.92□□□□□ -0.18
TRAF1-201ENST00000373887 PDCD4Q53EL6 469 aaKnown RBP13.92□□□□□ -0.18
TRAF1-201ENST00000373887 ZNF648Q5T619 568 aaPredicted RBP13.92□□□□□ -0.18
TRAF1-201ENST00000373887 RASGEF1CQ8N431 466 aa13.92□□□□□ -0.18
TRAF1-201ENST00000373887 GPR62Q9BZJ7 368 aa13.92□□□□□ -0.18
TRAF1-201ENST00000373887 SLC5A7Q9GZV3 580 aa13.92□□□□□ -0.18
TRAF1-201ENST00000373887 IL23AQ9NPF7 189 aa13.92□□□□□ -0.18
TRAF1-201ENST00000373887 PPM1HQ9ULR3 514 aa13.92□□□□□ -0.18
TRAF1-201ENST00000373887 YARS2Q9Y2Z4 477 aaKnown RBP13.92□□□□□ -0.18
TRAF1-201ENST00000373887 EI24O14681 340 aa13.91□□□□□ -0.18
TRAF1-201ENST00000373887 TACSTD2P09758 323 aa13.91□□□□□ -0.18
TRAF1-201ENST00000373887 TSTQ16762 297 aaKnown RBP13.91□□□□□ -0.18
TRAF1-201ENST00000373887 LRRC66Q68CR7 880 aa13.91□□□□□ -0.18
TRAF1-201ENST00000373887 PXYLP1Q8TE99 480 aa13.91□□□□□ -0.18
TRAF1-201ENST00000373887 SMOQ99835 787 aa13.91□□□□□ -0.18
TRAF1-201ENST00000373887 PAAF1Q9BRP4 392 aa13.91□□□□□ -0.18
TRAF1-201ENST00000373887 DMAC2Q9NW81 257 aa13.91□□□□□ -0.18
TRAF1-201ENST00000373887 TEX13DA0A0J9YY54 714 aaPredicted RBP13.91□□□□□ -0.18
TRAF1-201ENST00000373887 PCDH7O60245 1069 aa13.91□□□□□ -0.18
TRAF1-201ENST00000373887 C8GP07360 202 aa13.91□□□□□ -0.18
TRAF1-201ENST00000373887 BNIP1Q12981 228 aa13.91□□□□□ -0.18
TRAF1-201ENST00000373887 COMTD1Q86VU5 262 aa13.91□□□□□ -0.18
TRAF1-201ENST00000373887 SLC37A3Q8NCC5 494 aa13.91□□□□□ -0.18
TRAF1-201ENST00000373887 TCEAL3Q969E4 200 aa13.91□□□□□ -0.18
TRAF1-201ENST00000373887 ZBED6CLQ96FA7 236 aaPredicted RBP13.91□□□□□ -0.18
TRAF1-201ENST00000373887 RDH8Q9NYR8 311 aa13.91□□□□□ -0.18
TRAF1-201ENST00000373887 TAC3Q9UHF0 121 aa13.91□□□□□ -0.18
TRAF1-201ENST00000373887 GNG8Q9UK08 70 aa13.91□□□□□ -0.18
TRAF1-201ENST00000373887 J3QRK9 145 aa13.91□□□□□ -0.18
TRAF1-201ENST00000373887 UNGP13051 313 aaPredicted RBP13.91□□□□□ -0.18
TRAF1-201ENST00000373887 RPP38P78345 283 aaKnown RBP13.91□□□□□ -0.18
TRAF1-201ENST00000373887 ATXN7L3Q14CW9 347 aaPredicted RBP13.91□□□□□ -0.18
TRAF1-201ENST00000373887 NPTX1Q15818 432 aa13.91□□□□□ -0.18
TRAF1-201ENST00000373887 TRMT10BQ6PF06 316 aaKnown RBP13.91□□□□□ -0.18
TRAF1-201ENST00000373887 RAB2BQ8WUD1 216 aa13.91□□□□□ -0.18
TRAF1-201ENST00000373887 GATAD2BQ8WXI9 593 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms