RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 TBC1D3FA6NER0 549 aaPredicted RBP18.84■□□□□ 0.61
HDAC1-201ENST00000373548 GABRR3A8MPY1 467 aa18.84■□□□□ 0.61
HDAC1-201ENST00000373548 TBC1D3LB9A6J9 549 aa18.84■□□□□ 0.61
HDAC1-201ENST00000373548 PDLIM1O00151 329 aa18.84■□□□□ 0.61
HDAC1-201ENST00000373548 LATO43561 262 aa18.84■□□□□ 0.61
HDAC1-201ENST00000373548 SCELO95171 688 aa18.84■□□□□ 0.61
HDAC1-201ENST00000373548 C1QCP02747 245 aa18.84■□□□□ 0.61
HDAC1-201ENST00000373548 TBC1D3HP0C7X1 549 aa18.84■□□□□ 0.61
HDAC1-201ENST00000373548 TBC1D3GQ6DHY5 549 aa18.84■□□□□ 0.61
HDAC1-201ENST00000373548 TBC1D3CQ6IPX1 549 aa18.84■□□□□ 0.61
HDAC1-201ENST00000373548 COMMD6Q7Z4G1 85 aa18.84■□□□□ 0.61
HDAC1-201ENST00000373548 VN1R5Q7Z5H4 357 aa18.84■□□□□ 0.61
HDAC1-201ENST00000373548 TBC1D3Q8IZP1 549 aaPredicted RBP18.84■□□□□ 0.61
HDAC1-201ENST00000373548 CLECL1Q8IZS7 167 aa18.84■□□□□ 0.61
HDAC1-201ENST00000373548 PACRGLQ8N7B6 248 aa18.84■□□□□ 0.61
HDAC1-201ENST00000373548 DUSP26Q9BV47 211 aa18.84■□□□□ 0.61
HDAC1-201ENST00000373548 OSBPL11Q9BXB4 747 aa18.84■□□□□ 0.61
HDAC1-201ENST00000373548 OSGEPL1Q9H4B0 414 aa18.84■□□□□ 0.61
HDAC1-201ENST00000373548 PDP2Q9P2J9 529 aa18.84■□□□□ 0.61
HDAC1-201ENST00000373548 TAC3Q9UHF0 121 aa18.84■□□□□ 0.61
HDAC1-201ENST00000373548 OAZ3Q9UMX2 235 aa18.84■□□□□ 0.61
HDAC1-201ENST00000373548 TSC22D4Q9Y3Q8 395 aa18.84■□□□□ 0.61
HDAC1-201ENST00000373548 PIAS3Q9Y6X2 628 aa18.84■□□□□ 0.61
HDAC1-201ENST00000373548 SAP18O00422 153 aaKnown RBP18.83■□□□□ 0.61
HDAC1-201ENST00000373548 ACOX3O15254 700 aa18.83■□□□□ 0.61
HDAC1-201ENST00000373548 LDLRP01130 860 aa18.83■□□□□ 0.61
HDAC1-201ENST00000373548 IDSP22304 550 aa18.83■□□□□ 0.61
HDAC1-201ENST00000373548 PIK3CBP42338 1070 aa18.83■□□□□ 0.61
HDAC1-201ENST00000373548 PPP2CBP62714 309 aa18.83■□□□□ 0.61
HDAC1-201ENST00000373548 PPP2CAP67775 309 aa18.83■□□□□ 0.61
HDAC1-201ENST00000373548 ABHD18Q0P651 414 aa18.83■□□□□ 0.61
HDAC1-201ENST00000373548 TMIGD1Q6UXZ0 262 aa18.83■□□□□ 0.61
HDAC1-201ENST00000373548 CAMKMTQ7Z624 323 aa18.83■□□□□ 0.61
HDAC1-201ENST00000373548 OR52E4Q8NGH9 312 aa18.83■□□□□ 0.61
HDAC1-201ENST00000373548 UBE2E3Q969T4 207 aa18.83■□□□□ 0.61
HDAC1-201ENST00000373548 SH3KBP1Q96B97 665 aa18.83■□□□□ 0.61
HDAC1-201ENST00000373548 INSM2Q96T92 566 aaPredicted RBP18.83■□□□□ 0.61
HDAC1-201ENST00000373548 MYOCQ99972 504 aa18.83■□□□□ 0.61
HDAC1-201ENST00000373548 TIMM29Q9BSF4 260 aa18.83■□□□□ 0.61
HDAC1-201ENST00000373548 C9orf16Q9BUW7 83 aa18.83■□□□□ 0.61
HDAC1-201ENST00000373548 C1QTNF7Q9BXJ2 289 aa18.83■□□□□ 0.61
HDAC1-201ENST00000373548 BTBD1Q9H0C5 482 aa18.83■□□□□ 0.61
HDAC1-201ENST00000373548 LMCD1Q9NZU5 365 aa18.83■□□□□ 0.61
HDAC1-201ENST00000373548 EXO1Q9UQ84 846 aaKnown RBP18.83■□□□□ 0.61
HDAC1-201ENST00000373548 KCNK6Q9Y257 313 aa18.83■□□□□ 0.61
HDAC1-201ENST00000373548 PLEKHM1Q9Y4G2 1056 aa18.83■□□□□ 0.61
HDAC1-201ENST00000373548 EFNA1P20827 205 aaPredicted RBP18.83■□□□□ 0.6
HDAC1-201ENST00000373548 HSD17B2P37059 387 aa18.83■□□□□ 0.6
HDAC1-201ENST00000373548 MAP7Q14244 749 aa18.83■□□□□ 0.6
HDAC1-201ENST00000373548 MLF2Q15773 248 aaPredicted RBP18.83■□□□□ 0.6
HDAC1-201ENST00000373548 FAM98BQ52LJ0 330 aaKnown RBP18.83■□□□□ 0.6
HDAC1-201ENST00000373548 CPTPQ5TA50 214 aa18.83■□□□□ 0.6
HDAC1-201ENST00000373548 ENPP6Q6UWR7 440 aa18.83■□□□□ 0.6
HDAC1-201ENST00000373548 SPRED1Q7Z699 444 aa18.83■□□□□ 0.6
HDAC1-201ENST00000373548 C17orf64Q86WR6 236 aa18.83■□□□□ 0.6
HDAC1-201ENST00000373548 CHERPQ8IWX8 916 aaKnown RBP18.83■□□□□ 0.6
HDAC1-201ENST00000373548 WDR48Q8TAF3 677 aa18.83■□□□□ 0.6
HDAC1-201ENST00000373548 FBXO30Q8TB52 745 aa18.83■□□□□ 0.6
HDAC1-201ENST00000373548 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.83■□□□□ 0.64e-6■■■□□ 17.2
HDAC1-201ENST00000373548 APOOQ9BUR5 198 aa18.83■□□□□ 0.6
HDAC1-201ENST00000373548 RMI1Q9H9A7 625 aa18.83■□□□□ 0.6
HDAC1-201ENST00000373548 PREBQ9HCU5 417 aa18.83■□□□□ 0.6
HDAC1-201ENST00000373548 SPATA7Q9P0W8 599 aa18.83■□□□□ 0.6
HDAC1-201ENST00000373548 LIMD1Q9UGP4 676 aa18.83■□□□□ 0.6
HDAC1-201ENST00000373548 MAPRE3Q9UPY8 281 aa18.83■□□□□ 0.6
HDAC1-201ENST00000373548 A0A1W2PPV9 198 aa18.82■□□□□ 0.6
HDAC1-201ENST00000373548 PRR19A6NJB7 356 aa18.82■□□□□ 0.6
HDAC1-201ENST00000373548 SLC31A1O15431 190 aa18.82■□□□□ 0.6
HDAC1-201ENST00000373548 CPSF4O95639 269 aaKnown RBP18.82■□□□□ 0.6
HDAC1-201ENST00000373548 GBAP04062 536 aa18.82■□□□□ 0.6
HDAC1-201ENST00000373548 LINGO3P0C6S8 592 aa18.82■□□□□ 0.6
HDAC1-201ENST00000373548 RAP2AP10114 183 aa18.82■□□□□ 0.6
HDAC1-201ENST00000373548 HPCAL1P37235 193 aa18.82■□□□□ 0.6
HDAC1-201ENST00000373548 ZNF763Q0D2J5 394 aa18.82■□□□□ 0.6
HDAC1-201ENST00000373548 NKG7Q16617 165 aa18.82■□□□□ 0.6
HDAC1-201ENST00000373548 FAM162AQ96A26 154 aa18.82■□□□□ 0.6
HDAC1-201ENST00000373548 COQ8BQ96D53 544 aa18.82■□□□□ 0.6
HDAC1-201ENST00000373548 SIPA1Q96FS4 1042 aa18.82■□□□□ 0.6
HDAC1-201ENST00000373548 REXO5Q96IC2 774 aaKnown RBP18.82■□□□□ 0.6
HDAC1-201ENST00000373548 C12orf66Q96MD2 445 aa18.82■□□□□ 0.6
HDAC1-201ENST00000373548 CUEDC1Q9NWM3 386 aaPredicted RBP18.82■□□□□ 0.6
HDAC1-201ENST00000373548 CLIC1O00299 241 aa18.82■□□□□ 0.6
HDAC1-201ENST00000373548 DLGAP1O14490 977 aa18.82■□□□□ 0.6
HDAC1-201ENST00000373548 CREG1O75629 220 aa18.82■□□□□ 0.6
HDAC1-201ENST00000373548 ENGP17813 658 aa18.82■□□□□ 0.6
HDAC1-201ENST00000373548 PSMB5P28074 263 aa18.82■□□□□ 0.6
HDAC1-201ENST00000373548 CHRNB3Q05901 458 aa18.82■□□□□ 0.6
HDAC1-201ENST00000373548 NHSL2Q5HYW2 709 aa18.82■□□□□ 0.6
HDAC1-201ENST00000373548 TMTC4Q5T4D3 741 aa18.82■□□□□ 0.6
HDAC1-201ENST00000373548 ZNF621Q6ZSS3 439 aa18.82■□□□□ 0.6
HDAC1-201ENST00000373548 FAM124AQ86V42 546 aa18.82■□□□□ 0.6
HDAC1-201ENST00000373548 KRT78Q8N1N4 520 aa18.82■□□□□ 0.6
HDAC1-201ENST00000373548 METTL4Q8N3J2 472 aa18.82■□□□□ 0.6
HDAC1-201ENST00000373548 MFSD2AQ8NA29 543 aa18.82■□□□□ 0.6
HDAC1-201ENST00000373548 SMPDL3AQ92484 453 aa18.82■□□□□ 0.6
HDAC1-201ENST00000373548 FERD3LQ96RJ6 166 aa18.82■□□□□ 0.6
HDAC1-201ENST00000373548 PELI2Q9HAT8 420 aa18.82■□□□□ 0.6
HDAC1-201ENST00000373548 FZD4Q9ULV1 537 aa18.82■□□□□ 0.6
HDAC1-201ENST00000373548 SUFUQ9UMX1 484 aa18.82■□□□□ 0.6
HDAC1-201ENST00000373548 SCML1Q9UN30 329 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms