RNA–Protein interactions for RNA: ENST00000371248.3

VPS37B-202, Transcript of VPS37B, ESCRT-I subunit, humanhuman

TSL 3

Gene VPS37B, Length 2,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37B-202ENST00000371248 MAP3K7O43318 606 aa16.88■□□□□ 0.29
VPS37B-202ENST00000371248 ENO1P06733 434 aaKnown RBP16.88■□□□□ 0.29
VPS37B-202ENST00000371248 FGF4P08620 206 aa16.88■□□□□ 0.29
VPS37B-202ENST00000371248 EZRP15311 586 aaKnown RBP16.88■□□□□ 0.29
VPS37B-202ENST00000371248 RPL14P50914 215 aaKnown RBP16.88■□□□□ 0.29
VPS37B-202ENST00000371248 CLDN6P56747 220 aa16.88■□□□□ 0.29
VPS37B-202ENST00000371248 HSD11B2P80365 405 aa16.88■□□□□ 0.29
VPS37B-202ENST00000371248 CYP4F3Q08477 520 aa16.88■□□□□ 0.29
VPS37B-202ENST00000371248 TCHHL1Q5QJ38 904 aaPredicted RBP16.88■□□□□ 0.29
VPS37B-202ENST00000371248 CLYBLQ8N0X4 340 aa16.88■□□□□ 0.29
VPS37B-202ENST00000371248 MTFMTQ96DP5 389 aaKnown RBP16.88■□□□□ 0.29
VPS37B-202ENST00000371248 C7orf26Q96N11 449 aa16.88■□□□□ 0.29
VPS37B-202ENST00000371248 PILRAQ9UKJ1 303 aa16.88■□□□□ 0.29
VPS37B-202ENST00000371248 APOBEC2Q9Y235 224 aaKnown RBP16.88■□□□□ 0.29
VPS37B-202ENST00000371248 PCDHGA11Q9Y5H2 935 aa16.88■□□□□ 0.29
VPS37B-202ENST00000371248 ADAMTS20P59510 1910 aa16.88■□□□□ 0.29
VPS37B-202ENST00000371248 ANKRD34CP0C6C1 535 aa16.87■□□□□ 0.29
VPS37B-202ENST00000371248 KITP10721 976 aa16.87■□□□□ 0.29
VPS37B-202ENST00000371248 UROSP10746 265 aa16.87■□□□□ 0.29
VPS37B-202ENST00000371248 CDK4P11802 303 aa16.87■□□□□ 0.29
VPS37B-202ENST00000371248 PCNAP12004 261 aa16.87■□□□□ 0.29
VPS37B-202ENST00000371248 NELFEP18615 380 aaKnown RBP16.87■□□□□ 0.29
VPS37B-202ENST00000371248 MLLT3P42568 568 aaPredicted RBP16.87■□□□□ 0.29
VPS37B-202ENST00000371248 PDX1P52945 283 aa16.87■□□□□ 0.29
VPS37B-202ENST00000371248 ZFP36L1Q07352 338 aaKnown RBP16.87■□□□□ 0.29
VPS37B-202ENST00000371248 KMT5CQ86Y97 462 aa16.87■□□□□ 0.29
VPS37B-202ENST00000371248 CRLF3Q8IUI8 442 aa16.87■□□□□ 0.29
VPS37B-202ENST00000371248 TBC1D19Q8N5T2 526 aa16.87■□□□□ 0.29
VPS37B-202ENST00000371248 ANKRD53Q8N9V6 530 aa16.87■□□□□ 0.29
VPS37B-202ENST00000371248 OR7G3Q8NG95 312 aa16.87■□□□□ 0.29
VPS37B-202ENST00000371248 UBE2E3Q969T4 207 aa16.87■□□□□ 0.29
VPS37B-202ENST00000371248 SLC41A2Q96JW4 573 aa16.87■□□□□ 0.29
VPS37B-202ENST00000371248 ZFYVE21Q9BQ24 234 aa16.87■□□□□ 0.29
VPS37B-202ENST00000371248 PITHD1Q9GZP4 211 aaPredicted RBP16.87■□□□□ 0.29
VPS37B-202ENST00000371248 PRM3Q9NNZ6 103 aa16.87■□□□□ 0.29
VPS37B-202ENST00000371248 ETAA1Q9NY74 926 aa16.87■□□□□ 0.29
VPS37B-202ENST00000371248 HAO1Q9UJM8 370 aa16.87■□□□□ 0.29
VPS37B-202ENST00000371248 BTRCQ9Y297 605 aa16.87■□□□□ 0.29
VPS37B-202ENST00000371248 KIF26BQ2KJY2 2108 aa16.87■□□□□ 0.29
VPS37B-202ENST00000371248 HGSO14964 777 aaPredicted RBP16.87■□□□□ 0.29
VPS37B-202ENST00000371248 VIMP08670 466 aaKnown RBP16.87■□□□□ 0.29
VPS37B-202ENST00000371248 SPTBP11277 2137 aa16.87■□□□□ 0.29
VPS37B-202ENST00000371248 BCL6P41182 706 aa16.87■□□□□ 0.29
VPS37B-202ENST00000371248 SCTRP47872 440 aa16.87■□□□□ 0.29
VPS37B-202ENST00000371248 NEK2P51955 445 aa16.87■□□□□ 0.29
VPS37B-202ENST00000371248 INHBCP55103 352 aa16.87■□□□□ 0.29
VPS37B-202ENST00000371248 RPS15AP62244 130 aaKnown RBP16.87■□□□□ 0.29
VPS37B-202ENST00000371248 GNGT1P63211 74 aa16.87■□□□□ 0.29
VPS37B-202ENST00000371248 KCNAB1Q14722 419 aa16.87■□□□□ 0.29
VPS37B-202ENST00000371248 DEFB110Q30KQ9 67 aa16.87■□□□□ 0.29
VPS37B-202ENST00000371248 KANK2Q63ZY3 851 aa16.87■□□□□ 0.29
VPS37B-202ENST00000371248 ADNP2Q6IQ32 1131 aa16.87■□□□□ 0.29
VPS37B-202ENST00000371248 LAS2Q8IYD9 372 aa16.87■□□□□ 0.29
VPS37B-202ENST00000371248 DNAJC22Q8N4W6 341 aa16.87■□□□□ 0.29
VPS37B-202ENST00000371248 N4BP2L2Q92802 583 aaPredicted RBP16.87■□□□□ 0.29
VPS37B-202ENST00000371248 TMEM74Q96NL1 305 aa16.87■□□□□ 0.29
VPS37B-202ENST00000371248 SARGQ9BW04 601 aa16.87■□□□□ 0.29
VPS37B-202ENST00000371248 SLC29A3Q9BZD2 475 aa16.87■□□□□ 0.29
VPS37B-202ENST00000371248 ELOVL6Q9H5J4 265 aa16.87■□□□□ 0.29
VPS37B-202ENST00000371248 NT5DC2Q9H857 520 aa16.87■□□□□ 0.29
VPS37B-202ENST00000371248 SYNPO2LQ9H987 977 aa16.87■□□□□ 0.29
VPS37B-202ENST00000371248 MARCOQ9UEW3 520 aaPredicted RBP16.87■□□□□ 0.29
VPS37B-202ENST00000371248 SNX6Q9UNH7 406 aa16.87■□□□□ 0.29
VPS37B-202ENST00000371248 HCRTR1O43613 425 aa16.86■□□□□ 0.29
VPS37B-202ENST00000371248 DKK1O94907 266 aa16.86■□□□□ 0.29
VPS37B-202ENST00000371248 KCNK5O95279 499 aa16.86■□□□□ 0.29
VPS37B-202ENST00000371248 PAX7P23759 505 aa16.86■□□□□ 0.29
VPS37B-202ENST00000371248 RELAQ04206 551 aa16.86■□□□□ 0.29
VPS37B-202ENST00000371248 IFT88Q13099 833 aa16.86■□□□□ 0.29
VPS37B-202ENST00000371248 TRA2AQ13595 282 aaKnown RBP eCLIP16.86■□□□□ 0.29
VPS37B-202ENST00000371248 DDX39BQ13838 428 aaKnown RBP16.86■□□□□ 0.29
VPS37B-202ENST00000371248 SGO1Q5FBB7 561 aa16.86■□□□□ 0.29
VPS37B-202ENST00000371248 ZC3H12BQ5HYM0 836 aaKnown RBP16.86■□□□□ 0.29
VPS37B-202ENST00000371248 CDCP2Q5VXM1 449 aa16.86■□□□□ 0.29
VPS37B-202ENST00000371248 FRG2Q64ET8 278 aa16.86■□□□□ 0.29
VPS37B-202ENST00000371248 FRMPD2BQ6IN97 320 aa16.86■□□□□ 0.29
VPS37B-202ENST00000371248 RNF44Q7L0R7 432 aa16.86■□□□□ 0.29
VPS37B-202ENST00000371248 ALYREFQ86V81 257 aaKnown RBP16.86■□□□□ 0.29
VPS37B-202ENST00000371248 D2HGDHQ8N465 521 aa16.86■□□□□ 0.29
VPS37B-202ENST00000371248 MFSD9Q8NBP5 474 aa16.86■□□□□ 0.29
VPS37B-202ENST00000371248 WDR20Q8TBZ3 569 aa16.86■□□□□ 0.29
VPS37B-202ENST00000371248 REPS1Q96D71 796 aa16.86■□□□□ 0.29
VPS37B-202ENST00000371248 FRG2BQ96QU4 278 aa16.86■□□□□ 0.29
VPS37B-202ENST00000371248 OR2A5Q96R48 311 aa16.86■□□□□ 0.29
VPS37B-202ENST00000371248 SH3GL3Q99963 347 aa16.86■□□□□ 0.29
VPS37B-202ENST00000371248 CHRNA10Q9GZZ6 450 aa16.86■□□□□ 0.29
VPS37B-202ENST00000371248 FARSBQ9NSD9 589 aaKnown RBP16.86■□□□□ 0.29
VPS37B-202ENST00000371248 PCDHGA4Q9Y5G9 962 aa16.86■□□□□ 0.29
VPS37B-202ENST00000371248 DNAJC15Q9Y5T4 150 aa16.86■□□□□ 0.29
VPS37B-202ENST00000371248 ANKDD1BA6NHY2 528 aa16.85■□□□□ 0.29
VPS37B-202ENST00000371248 MANBAO00462 879 aa16.85■□□□□ 0.29
VPS37B-202ENST00000371248 EDF1O60869 148 aaKnown RBP16.85■□□□□ 0.29
VPS37B-202ENST00000371248 ULK1O75385 1050 aa16.85■□□□□ 0.29
VPS37B-202ENST00000371248 MT-CO3P00414 261 aa16.85■□□□□ 0.29
VPS37B-202ENST00000371248 KRT6AP02538 564 aa16.85■□□□□ 0.29
VPS37B-202ENST00000371248 KRT6BP04259 564 aa16.85■□□□□ 0.29
VPS37B-202ENST00000371248 KRT6CP48668 564 aa16.85■□□□□ 0.29
VPS37B-202ENST00000371248 UGT3A2Q3SY77 523 aa16.85■□□□□ 0.29
VPS37B-202ENST00000371248 TMTC4Q5T4D3 741 aa16.85■□□□□ 0.29
VPS37B-202ENST00000371248 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms