RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 ZNF7P17097 686 aaPredicted RBP3.46□□□□□ -1.86
MCF2-202ENST00000370573 ITGB6P18564 788 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 CD9P21926 228 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 CRABP2P29373 138 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 TRIM23P36406 574 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 ETV4P43268 484 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 GPR1P46091 355 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 MAN2A2P49641 1150 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 SLC18A1P54219 525 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 PRKAA2P54646 552 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 TLE1Q04724 770 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 SIGLEC14Q08ET2 396 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 DMWDQ09019 674 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 TMEM115Q12893 351 aaPredicted RBP3.46□□□□□ -1.86
MCF2-202ENST00000370573 SGCGQ13326 291 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 RTP5Q14D33 572 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 FLYWCH1Q4VC44 716 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 LDLRAP1Q5SW96 308 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 TPRG1LQ5T0D9 272 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 N4BP2L1Q5TBK1 243 aaPredicted RBP3.46□□□□□ -1.86
MCF2-202ENST00000370573 PTRHD1Q6GMV3 140 aaKnown RBP3.46□□□□□ -1.86
MCF2-202ENST00000370573 RAET1GQ6H3X3 334 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 KIAA1161Q6NSJ0 714 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 FAM45BPQ6NSW5 357 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 NEK5Q6P3R8 708 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 NEK10Q6ZWH5 1172 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 RAPH1Q70E73 1250 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 DET1Q7L5Y6 550 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 TRIM69Q86WT6 500 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 GPR156Q8NFN8 814 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 OR2T34Q8NGX1 318 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 GDAP1Q8TB36 358 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 FAM45AQ8TCE6 357 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 PHOSPHO1Q8TCT1 267 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 CD200R1Q8TD46 325 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 MGARPQ8TDB4 240 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 HEXDCQ8WVB3 486 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 TOE1Q96GM8 510 aaKnown RBP3.46□□□□□ -1.86
MCF2-202ENST00000370573 MYOCQ99972 504 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 MRPL46Q9H2W6 279 aaKnown RBP3.46□□□□□ -1.86
MCF2-202ENST00000370573 SGK2Q9HBY8 427 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 FZD3Q9NPG1 666 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 ATXN10Q9UBB4 475 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 FTSJ1Q9UET6 329 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 TLK1Q9UKI8 766 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 CORO1CQ9ULV4 474 aaPredicted RBP3.46□□□□□ -1.86
MCF2-202ENST00000370573 WASF3Q9UPY6 502 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 ACOT9Q9Y305 439 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 DHRS7Q9Y394 339 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 A0A087X1B8 175 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 TMEM202A6NGA9 273 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 LRRC72A6NJI9 287 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 TMEM233B4DJY2 109 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 TARM1B6A8C7 271 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 PFDN6O15212 129 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 LATO43561 262 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 DCXO43602 365 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 DOK2O60496 412 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 AP2A2O94973 939 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 KLHL2O95198 593 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 TRIM16O95361 564 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 GSTA1P08263 222 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 CCDC166P0CW27 439 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 TDGF1P13385 188 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 CHRM3P20309 590 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 MSH3P20585 1137 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 TEAD1P28347 426 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 AKT1P31749 480 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 CCR7P32248 378 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 CNR2P34972 360 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 PPARGP37231 505 aaPredicted RBP3.46□□□□□ -1.86
MCF2-202ENST00000370573 MDH1P40925 334 aaKnown RBP3.46□□□□□ -1.86
MCF2-202ENST00000370573 NSG1P42857 185 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 CXCL12P48061 93 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 CLDN2P57739 230 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 IRX4P78413 519 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 CBX1P83916 185 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 CDK3Q00526 305 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 CD69Q07108 199 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 CSHL1Q14406 222 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 INSCQ1MX18 579 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 ZNF658BQ4V348 819 aaPredicted RBP3.46□□□□□ -1.86
MCF2-202ENST00000370573 ACSBG2Q5FVE4 666 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 CES4AQ5XG92 561 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 CD276Q5ZPR3 534 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 KIAA0895LQ68EN5 471 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 BORAQ6PGQ7 559 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 TMEM220Q6QAJ8 160 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 TSSK4Q6SA08 328 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 TEPPQ6URK8 271 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 CYHR1Q6ZMK1 362 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 ZNF547Q8IVP9 402 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 DEFB119Q8N690 84 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 ADAMTS17Q8TE56 1095 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 EEF1AKMT1Q8WVE0 214 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 KCNJ9Q92806 393 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 INPP5DQ92835 1189 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 PTERQ96BW5 349 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 DCUN1D1Q96GG9 259 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 HIC2Q96JB3 615 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms