RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 CREBBPQ92793 2442 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 A0A1W2PP18 115 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 CPN1P15169 458 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 MGAT1P26572 445 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 ERVK-9P63128 1117 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 UBE2IP63279 158 aaKnown RBP3.66□□□□□ -1.82
SYNE1-207ENST00000367255 TMEM130Q8N3G9 435 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 ZNF548Q8NEK5 533 aaPredicted RBP3.66□□□□□ -1.82
SYNE1-207ENST00000367255 ARNTL2Q8WYA1 636 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 ORAI3Q9BRQ5 295 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 BANF2Q9H503 90 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 CAPN14A8MX76 684 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 TRIM77I1YAP6 450 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 ARNTLO00327 626 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 UPK1BO75841 260 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 OR2F2O95006 317 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 HOXB9P17482 250 aaPredicted RBP3.66□□□□□ -1.82
SYNE1-207ENST00000367255 COMTP21964 271 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 GALK1P51570 392 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 IL2P60568 153 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 OR2F1Q13607 317 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 PTRHD1Q6GMV3 140 aaKnown RBP3.66□□□□□ -1.82
SYNE1-207ENST00000367255 COPS9Q8WXC6 57 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 PARK7Q99497 189 aaKnown RBP3.66□□□□□ -1.82
SYNE1-207ENST00000367255 MS4A12Q9NXJ0 267 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 SLC2A6Q9UGQ3 507 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 LAMP3Q9UQV4 416 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 ATG13O75143 517 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 TFPTP0C1Z6 253 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 SLC5A3P53794 718 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 CDH12P55289 794 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 EVX2Q03828 476 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 TMEM132DQ14C87 1099 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 Q5PR19 223 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 OR5AP2Q8NGF4 316 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 FBXO30Q8TB52 745 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 SNX33Q8WV41 574 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 HS6ST2Q96MM7 605 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 ALG2Q9H553 416 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 MROH8Q9H579 483 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 ALG5Q9Y673 324 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 GLYATL1P3A0A0U1RQE8 302 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 LINC01549A6NIU2 74 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 B4GALT4O60513 344 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 PRAMEF2O60811 474 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 MMP8P22894 467 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 NFYBP25208 207 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 PTGER3P43115 390 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 NRG1Q02297 640 aaPredicted RBP3.66□□□□□ -1.82
SYNE1-207ENST00000367255 NOMO2Q5JPE7 1267 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 VWA5B2Q8N398 1253 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 SYNPOQ8N3V7 929 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 OTUB2Q96DC9 234 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 FAM212BQ9NTI7 297 aaPredicted RBP3.66□□□□□ -1.82
SYNE1-207ENST00000367255 PRODHO43272 600 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 SIX6O95475 246 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 C1RP00736 705 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 IFNA21P01568 189 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 TXNP10599 105 aaKnown RBP3.66□□□□□ -1.82
SYNE1-207ENST00000367255 BMXP51813 675 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 OR10A3P58181 314 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 MEAF6Q9HAF1 191 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 PRMT8Q9NR22 394 aaPredicted RBP3.66□□□□□ -1.82
SYNE1-207ENST00000367255 RBFOX1Q9NWB1 397 aaKnown RBP3.66□□□□□ -1.82
SYNE1-207ENST00000367255 DCAF8L1A6NGE4 600 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 GRM5P41594 1212 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 SERPINA11Q86U17 422 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 OR8G5Q8NG78 346 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 TNFAIP8L1Q8WVP5 186 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 TFAP2CQ92754 450 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 OR51B6Q9H340 312 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 DPEP3Q9H4B8 488 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 A8MV72 311 aaPredicted RBP3.66□□□□□ -1.82
SYNE1-207ENST00000367255 SERPINA4P29622 427 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 GSK3AP49840 483 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 ERVS71-1P61550 626 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 TRA2BP62995 288 aaKnown RBP3.66□□□□□ -1.82
SYNE1-207ENST00000367255 RAPSNQ13702 412 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 RAB11BQ15907 218 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 SV2CQ496J9 727 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 NKAIN3Q8N8D7 197 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 OR6T1Q8NGN1 323 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 MRPL24Q96A35 216 aaKnown RBP3.66□□□□□ -1.82
SYNE1-207ENST00000367255 RCCD1A6NED2 376 aa3.65□□□□□ -1.82
SYNE1-207ENST00000367255 ZNF806P0C7X5 589 aa3.65□□□□□ -1.82
SYNE1-207ENST00000367255 RGS8P57771 180 aaPredicted RBP3.65□□□□□ -1.82
SYNE1-207ENST00000367255 ATF7IP2Q5U623 682 aa3.65□□□□□ -1.82
SYNE1-207ENST00000367255 TTC7BQ86TV6 843 aa3.65□□□□□ -1.82
SYNE1-207ENST00000367255 DCP1AQ9NPI6 582 aaPredicted RBP3.65□□□□□ -1.82
SYNE1-207ENST00000367255 LRFN2Q9ULH4 789 aa3.65□□□□□ -1.82
SYNE1-207ENST00000367255 HCN4Q9Y3Q4 1203 aa3.65□□□□□ -1.82
SYNE1-207ENST00000367255 CAPN8A6NHC0 703 aa3.65□□□□□ -1.82
SYNE1-207ENST00000367255 CRHBPP24387 322 aa3.65□□□□□ -1.82
SYNE1-207ENST00000367255 BOP1Q14137 746 aaKnown RBP3.65□□□□□ -1.82
SYNE1-207ENST00000367255 SLC25A30Q5SVS4 291 aa3.65□□□□□ -1.82
SYNE1-207ENST00000367255 CYP4V2Q6ZWL3 525 aaPredicted RBP3.65□□□□□ -1.82
SYNE1-207ENST00000367255 CLEC10AQ8IUN9 316 aa3.65□□□□□ -1.82
SYNE1-207ENST00000367255 PNLDC1Q8NA58 520 aaKnown RBP3.65□□□□□ -1.82
SYNE1-207ENST00000367255 OR52K2Q8NGK3 314 aa3.65□□□□□ -1.82
SYNE1-207ENST00000367255 RAB7BQ96AH8 199 aa3.65□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms