RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 SCN9AQ15858 1988 aa11.68□□□□□ -0.54
CDC42BPA-203ENST00000366766 KMOO15229 486 aa11.68□□□□□ -0.54
CDC42BPA-203ENST00000366766 ONECUT3O60422 494 aaPredicted RBP11.68□□□□□ -0.54
CDC42BPA-203ENST00000366766 UGDHO60701 494 aa11.68□□□□□ -0.54
CDC42BPA-203ENST00000366766 KCNJ13O60928 360 aa11.68□□□□□ -0.54
CDC42BPA-203ENST00000366766 ECHS1P30084 290 aa11.68□□□□□ -0.54
CDC42BPA-203ENST00000366766 SLC13A2Q13183 592 aa11.68□□□□□ -0.54
CDC42BPA-203ENST00000366766 CYBRD1Q53TN4 286 aa11.68□□□□□ -0.54
CDC42BPA-203ENST00000366766 LPIN3Q9BQK8 851 aa11.68□□□□□ -0.54
CDC42BPA-203ENST00000366766 TTYH1Q9H313 450 aaPredicted RBP11.68□□□□□ -0.54
CDC42BPA-203ENST00000366766 NPC1O15118 1278 aa11.68□□□□□ -0.54
CDC42BPA-203ENST00000366766 CKMT2P17540 419 aa11.68□□□□□ -0.54
CDC42BPA-203ENST00000366766 ACTC1P68032 377 aa11.68□□□□□ -0.54
CDC42BPA-203ENST00000366766 ACTA1P68133 377 aa11.68□□□□□ -0.54
CDC42BPA-203ENST00000366766 SDR16C5Q8N3Y7 309 aa11.68□□□□□ -0.54
CDC42BPA-203ENST00000366766 B3GALT6Q96L58 329 aa11.68□□□□□ -0.54
CDC42BPA-203ENST00000366766 CST11Q9H112 138 aa11.68□□□□□ -0.54
CDC42BPA-203ENST00000366766 TRBC2A0A5B9 178 aa11.68□□□□□ -0.54
CDC42BPA-203ENST00000366766 MYCLP1P12525 358 aaPredicted RBP11.68□□□□□ -0.54
CDC42BPA-203ENST00000366766 CEACAM20Q6UY09 585 aa11.68□□□□□ -0.54
CDC42BPA-203ENST00000366766 SH3RF2Q8TEC5 729 aa11.68□□□□□ -0.54
CDC42BPA-203ENST00000366766 ABI3Q9P2A4 366 aa11.68□□□□□ -0.54
CDC42BPA-203ENST00000366766 EXOSC1Q9Y3B2 195 aaKnown RBP11.68□□□□□ -0.54
CDC42BPA-203ENST00000366766 PLOD2O00469 737 aa11.68□□□□□ -0.54
CDC42BPA-203ENST00000366766 MTHFD1P11586 935 aaKnown RBP11.68□□□□□ -0.54
CDC42BPA-203ENST00000366766 UQCRC2P22695 453 aa11.68□□□□□ -0.54
CDC42BPA-203ENST00000366766 BMP8BP34820 402 aa11.68□□□□□ -0.54
CDC42BPA-203ENST00000366766 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.68□□□□□ -0.547e-6■■■□□ 19.2
CDC42BPA-203ENST00000366766 TPRG1LQ5T0D9 272 aa11.68□□□□□ -0.54
CDC42BPA-203ENST00000366766 BMP8AQ7Z5Y6 402 aa11.68□□□□□ -0.54
CDC42BPA-203ENST00000366766 SYVN1Q86TM6 617 aa11.68□□□□□ -0.54
CDC42BPA-203ENST00000366766 SIAH1Q8IUQ4 282 aa11.68□□□□□ -0.54
CDC42BPA-203ENST00000366766 INO80EQ8NBZ0 244 aaPredicted RBP11.68□□□□□ -0.54
CDC42BPA-203ENST00000366766 HAVCR2Q8TDQ0 301 aa11.68□□□□□ -0.54
CDC42BPA-203ENST00000366766 ISOC1Q96CN7 298 aa11.68□□□□□ -0.54
CDC42BPA-203ENST00000366766 HBEGFQ99075 208 aa11.68□□□□□ -0.54
CDC42BPA-203ENST00000366766 UCK2Q9BZX2 261 aa11.68□□□□□ -0.54
CDC42BPA-203ENST00000366766 FKBP14Q9NWM8 211 aa11.68□□□□□ -0.54
CDC42BPA-203ENST00000366766 RNF6Q9Y252 685 aa11.68□□□□□ -0.54
CDC42BPA-203ENST00000366766 NEMP2A6NFY4 417 aa11.68□□□□□ -0.54
CDC42BPA-203ENST00000366766 PPP2R2BQ00005 443 aa11.68□□□□□ -0.54
CDC42BPA-203ENST00000366766 CHRNA6Q15825 494 aa11.68□□□□□ -0.54
CDC42BPA-203ENST00000366766 ASRGL1Q7L266 308 aa11.68□□□□□ -0.54
CDC42BPA-203ENST00000366766 OR9A1PQ8NGU1 263 aa11.68□□□□□ -0.54
CDC42BPA-203ENST00000366766 HCN3Q9P1Z3 774 aa11.68□□□□□ -0.54
CDC42BPA-203ENST00000366766 ARID1AO14497 2285 aa11.68□□□□□ -0.54
CDC42BPA-203ENST00000366766 SIX3O95343 332 aaPredicted RBP11.68□□□□□ -0.54
CDC42BPA-203ENST00000366766 LCN8Q6JVE9 175 aa11.68□□□□□ -0.54
CDC42BPA-203ENST00000366766 TNFAIP8L2Q6P589 184 aaPredicted RBP11.68□□□□□ -0.54
CDC42BPA-203ENST00000366766 KLHL42Q9P2K6 505 aa11.68□□□□□ -0.54
CDC42BPA-203ENST00000366766 CDH7Q9ULB5 785 aa11.68□□□□□ -0.54
CDC42BPA-203ENST00000366766 TBX1O43435 398 aa11.68□□□□□ -0.54
CDC42BPA-203ENST00000366766 RASGRP1O95267 797 aa11.68□□□□□ -0.54
CDC42BPA-203ENST00000366766 LINGO3P0C6S8 592 aa11.68□□□□□ -0.54
CDC42BPA-203ENST00000366766 TRAM2Q15035 370 aa11.68□□□□□ -0.54
CDC42BPA-203ENST00000366766 ALDH16A1Q8IZ83 802 aa11.68□□□□□ -0.54
CDC42BPA-203ENST00000366766 GRIP1Q9Y3R0 1128 aa11.68□□□□□ -0.54
CDC42BPA-203ENST00000366766 SPIN1Q9Y657 262 aaPredicted RBP11.68□□□□□ -0.54
CDC42BPA-203ENST00000366766 TNRC6CQ9HCJ0 1690 aaKnown RBP11.68□□□□□ -0.54
CDC42BPA-203ENST00000366766 NRP1O14786 923 aa11.67□□□□□ -0.54
CDC42BPA-203ENST00000366766 MPC1LP0DKB6 136 aa11.67□□□□□ -0.54
CDC42BPA-203ENST00000366766 G6PDP11413 515 aa11.67□□□□□ -0.54
CDC42BPA-203ENST00000366766 ZNF823P16415 610 aa11.67□□□□□ -0.54
CDC42BPA-203ENST00000366766 RAPSNQ13702 412 aa11.67□□□□□ -0.54
CDC42BPA-203ENST00000366766 NANOGP8Q6NSW7 305 aa11.67□□□□□ -0.54
CDC42BPA-203ENST00000366766 NEDD4LQ96PU5 975 aa11.67□□□□□ -0.54
CDC42BPA-203ENST00000366766 NANOGQ9H9S0 305 aa11.67□□□□□ -0.54
CDC42BPA-203ENST00000366766 TBC1D17Q9HA65 648 aa11.67□□□□□ -0.54
CDC42BPA-203ENST00000366766 IFT46Q9NQC8 304 aa11.67□□□□□ -0.54
CDC42BPA-203ENST00000366766 BAIAP2Q9UQB8 552 aa11.67□□□□□ -0.54
CDC42BPA-203ENST00000366766 DLGAP1O14490 977 aa11.67□□□□□ -0.54
CDC42BPA-203ENST00000366766 CHP2O43745 196 aa11.67□□□□□ -0.54
CDC42BPA-203ENST00000366766 PEX10O60683 326 aa11.67□□□□□ -0.54
CDC42BPA-203ENST00000366766 CBX3Q13185 183 aa11.67□□□□□ -0.54
CDC42BPA-203ENST00000366766 MANEALQ5VSG8 457 aa11.67□□□□□ -0.54
CDC42BPA-203ENST00000366766 KBTBD7Q8WVZ9 684 aa11.67□□□□□ -0.54
CDC42BPA-203ENST00000366766 TMEM80Q96HE8 168 aa11.67□□□□□ -0.54
CDC42BPA-203ENST00000366766 TOR3AQ9H497 397 aa11.67□□□□□ -0.54
CDC42BPA-203ENST00000366766 ASCC3Q8N3C0 2202 aaKnown RBP11.67□□□□□ -0.54
CDC42BPA-203ENST00000366766 SLC35E2BP0CK96 405 aa11.67□□□□□ -0.54
CDC42BPA-203ENST00000366766 OR2B6P58173 313 aa11.67□□□□□ -0.54
CDC42BPA-203ENST00000366766 ENPP2Q13822 863 aa11.67□□□□□ -0.54
CDC42BPA-203ENST00000366766 COLEC12Q5KU26 742 aa11.67□□□□□ -0.54
CDC42BPA-203ENST00000366766 ACTL8Q9H568 366 aa11.67□□□□□ -0.54
CDC42BPA-203ENST00000366766 SH3D21A4FU49 640 aa11.67□□□□□ -0.54
CDC42BPA-203ENST00000366766 POU4F2Q12837 409 aa11.67□□□□□ -0.54
CDC42BPA-203ENST00000366766 ZNF776Q68DI1 518 aaPredicted RBP11.67□□□□□ -0.54
CDC42BPA-203ENST00000366766 ZNF517Q6ZMY9 492 aaPredicted RBP11.67□□□□□ -0.54
CDC42BPA-203ENST00000366766 ZNF358Q9NW07 568 aa11.67□□□□□ -0.54
CDC42BPA-203ENST00000366766 SLC22A14Q9Y267 594 aa11.67□□□□□ -0.54
CDC42BPA-203ENST00000366766 MMP20O60882 483 aa11.67□□□□□ -0.54
CDC42BPA-203ENST00000366766 RETP07949 1114 aa11.67□□□□□ -0.54
CDC42BPA-203ENST00000366766 ALPPL2P10696 532 aa11.67□□□□□ -0.54
CDC42BPA-203ENST00000366766 VITQ6UXI7 678 aa11.67□□□□□ -0.54
CDC42BPA-203ENST00000366766 SLC36A4Q6YBV0 504 aa11.67□□□□□ -0.54
CDC42BPA-203ENST00000366766 RASSF6Q6ZTQ3 369 aa11.67□□□□□ -0.54
CDC42BPA-203ENST00000366766 ZMIZ2Q8NF64 920 aa11.67□□□□□ -0.54
CDC42BPA-203ENST00000366766 DBF4BQ8NFT6 615 aa11.67□□□□□ -0.54
CDC42BPA-203ENST00000366766 BBS10Q8TAM1 723 aa11.67□□□□□ -0.54
CDC42BPA-203ENST00000366766 ABCG8Q9H221 673 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms