RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 LRRC32Q14392 662 aa13.31□□□□□ -0.28
VCP-201ENST00000358901 MARCH9Q86YJ5 346 aa13.31□□□□□ -0.28
VCP-201ENST00000358901 MMAAQ8IVH4 418 aaKnown RBP13.31□□□□□ -0.28
VCP-201ENST00000358901 CMTR2Q8IYT2 770 aaKnown RBP13.31□□□□□ -0.28
VCP-201ENST00000358901 GPR135Q8IZ08 494 aa13.31□□□□□ -0.28
VCP-201ENST00000358901 ARNTL2Q8WYA1 636 aa13.31□□□□□ -0.28
VCP-201ENST00000358901 TTYH1Q9H313 450 aaPredicted RBP13.31□□□□□ -0.28
VCP-201ENST00000358901 MRPS30Q9NP92 439 aaKnown RBP13.31□□□□□ -0.28
VCP-201ENST00000358901 DNAJC27Q9NZQ0 273 aa13.31□□□□□ -0.28
VCP-201ENST00000358901 ZNF451Q9Y4E5 1061 aa13.31□□□□□ -0.28
VCP-201ENST00000358901 PCDHB3Q9Y5E6 796 aa13.31□□□□□ -0.28
VCP-201ENST00000358901 CLDN4O14493 209 aa13.31□□□□□ -0.28
VCP-201ENST00000358901 PTGESO14684 152 aa13.31□□□□□ -0.28
VCP-201ENST00000358901 TSPAN9O75954 239 aa13.31□□□□□ -0.28
VCP-201ENST00000358901 PRAMEF12O95522 483 aa13.31□□□□□ -0.28
VCP-201ENST00000358901 SLC2A2P11168 524 aaPredicted RBP13.31□□□□□ -0.28
VCP-201ENST00000358901 RPL10P27635 214 aaKnown RBP13.31□□□□□ -0.28
VCP-201ENST00000358901 IST1P53990 364 aa13.31□□□□□ -0.28
VCP-201ENST00000358901 DCDC1P59894 354 aa13.31□□□□□ -0.28
VCP-201ENST00000358901 ADNP2Q6IQ32 1131 aa13.31□□□□□ -0.28
VCP-201ENST00000358901 SLC30A8Q8IWU4 369 aa13.31□□□□□ -0.28
VCP-201ENST00000358901 GHDCQ8N2G8 530 aa13.31□□□□□ -0.28
VCP-201ENST00000358901 OR10H5Q8NGA6 315 aa13.31□□□□□ -0.28
VCP-201ENST00000358901 RAB8BQ92930 207 aa13.31□□□□□ -0.28
VCP-201ENST00000358901 RELTQ969Z4 430 aa13.31□□□□□ -0.28
VCP-201ENST00000358901 SORT1Q99523 831 aa13.31□□□□□ -0.28
VCP-201ENST00000358901 MAPKAP1Q9BPZ7 522 aa13.31□□□□□ -0.28
VCP-201ENST00000358901 DHRS4Q9BTZ2 278 aa13.31□□□□□ -0.28
VCP-201ENST00000358901 DKK3Q9UBP4 350 aa13.31□□□□□ -0.28
VCP-201ENST00000358901 HCN4Q9Y3Q4 1203 aa13.31□□□□□ -0.28
VCP-201ENST00000358901 PHRF1Q9P1Y6 1649 aaKnown RBP13.31□□□□□ -0.28
VCP-201ENST00000358901 UPK3BL1B0FP48 263 aa13.31□□□□□ -0.28
VCP-201ENST00000358901 UPK3BL2E5RIL1 263 aa13.31□□□□□ -0.28
VCP-201ENST00000358901 RB1P06400 928 aa13.31□□□□□ -0.28
VCP-201ENST00000358901 SRPRAP08240 638 aaKnown RBP13.31□□□□□ -0.28
VCP-201ENST00000358901 KDELR2P33947 212 aa13.31□□□□□ -0.28
VCP-201ENST00000358901 TMBIM6P55061 237 aa13.31□□□□□ -0.28
VCP-201ENST00000358901 ABRAXAS2Q15018 415 aa13.31□□□□□ -0.28
VCP-201ENST00000358901 CYP27C1Q4G0S4 372 aa13.31□□□□□ -0.28
VCP-201ENST00000358901 RGMAQ96B86 450 aa13.31□□□□□ -0.28
VCP-201ENST00000358901 SRMSQ9H3Y6 488 aa13.31□□□□□ -0.28
VCP-201ENST00000358901 ZNF142P52746 1687 aaPredicted RBP13.31□□□□□ -0.28
VCP-201ENST00000358901 GNRH1P01148 92 aa13.3□□□□□ -0.28
VCP-201ENST00000358901 IFNA6P05013 189 aa13.3□□□□□ -0.28
VCP-201ENST00000358901 HMGN1P05114 100 aa13.3□□□□□ -0.28
VCP-201ENST00000358901 HLCSP50747 726 aa13.3□□□□□ -0.28
VCP-201ENST00000358901 TLE2Q04725 743 aa13.3□□□□□ -0.28
VCP-201ENST00000358901 PTGES3Q15185 160 aaKnown RBP13.3□□□□□ -0.28
VCP-201ENST00000358901 GPR68Q15743 365 aa13.3□□□□□ -0.28
VCP-201ENST00000358901 ZNF630Q2M218 657 aaPredicted RBP13.3□□□□□ -0.28
VCP-201ENST00000358901 C22orf39Q6P5X5 142 aa13.3□□□□□ -0.28
VCP-201ENST00000358901 IFNL1Q8IU54 200 aa13.3□□□□□ -0.28
VCP-201ENST00000358901 SAMD14Q8IZD0 417 aaPredicted RBP13.3□□□□□ -0.28
VCP-201ENST00000358901 TCEANCQ8N8B7 351 aa13.3□□□□□ -0.28
VCP-201ENST00000358901 TMEM145Q8NBT3 493 aa13.3□□□□□ -0.28
VCP-201ENST00000358901 TSEN15Q8WW01 171 aaKnown RBP13.3□□□□□ -0.28
VCP-201ENST00000358901 KCNH6Q9H252 994 aa13.3□□□□□ -0.28
VCP-201ENST00000358901 EBF1Q9UH73 591 aa13.3□□□□□ -0.28
VCP-201ENST00000358901 CICQ96RK0 1608 aaPredicted RBP13.3□□□□□ -0.28
VCP-201ENST00000358901 TMEM88BA6NKF7 163 aa13.3□□□□□ -0.28
VCP-201ENST00000358901 DUXAA6NLW8 204 aa13.3□□□□□ -0.28
VCP-201ENST00000358901 COCHO43405 550 aa13.3□□□□□ -0.28
VCP-201ENST00000358901 CDRT1O95170 752 aa13.3□□□□□ -0.28
VCP-201ENST00000358901 PRSS56P0CW18 603 aa13.3□□□□□ -0.28
VCP-201ENST00000358901 ACRP10323 421 aa13.3□□□□□ -0.28
VCP-201ENST00000358901 CAPN3P20807 821 aa13.3□□□□□ -0.28
VCP-201ENST00000358901 ALAS2P22557 587 aa13.3□□□□□ -0.28
VCP-201ENST00000358901 MAP2K4P45985 399 aa13.3□□□□□ -0.28
VCP-201ENST00000358901 AKR1D1P51857 326 aa13.3□□□□□ -0.28
VCP-201ENST00000358901 HSF2Q03933 536 aa13.3□□□□□ -0.28
VCP-201ENST00000358901 VMACQ2NL98 169 aa13.3□□□□□ -0.28
VCP-201ENST00000358901 TMEM44Q2T9K0 475 aa13.3□□□□□ -0.28
VCP-201ENST00000358901 ARL9Q6T311 187 aa13.3□□□□□ -0.28
VCP-201ENST00000358901 ANKFN1Q8N957 763 aa13.3□□□□□ -0.28
VCP-201ENST00000358901 SLAIN1Q8ND83 568 aa13.3□□□□□ -0.28
VCP-201ENST00000358901 SLC29A1Q99808 456 aa13.3□□□□□ -0.28
VCP-201ENST00000358901 CKLFQ9UBR5 152 aa13.3□□□□□ -0.28
VCP-201ENST00000358901 RGPD1P0DJD0 1748 aa13.3□□□□□ -0.28
VCP-201ENST00000358901 GPR32O75388 356 aa13.3□□□□□ -0.28
VCP-201ENST00000358901 SEMA3DO95025 777 aa13.3□□□□□ -0.28
VCP-201ENST00000358901 VIPR1P32241 457 aa13.3□□□□□ -0.28
VCP-201ENST00000358901 GATMP50440 423 aa13.3□□□□□ -0.28
VCP-201ENST00000358901 RING1Q06587 406 aa13.3□□□□□ -0.28
VCP-201ENST00000358901 GRIK2Q13002 908 aa13.3□□□□□ -0.28
VCP-201ENST00000358901 WSCD2Q2TBF2 565 aa13.3□□□□□ -0.28
VCP-201ENST00000358901 TMEM236Q5W0B7 351 aa13.3□□□□□ -0.28
VCP-201ENST00000358901 ATG9BQ674R7 924 aa13.3□□□□□ -0.28
VCP-201ENST00000358901 GRPEL2Q8TAA5 225 aa13.3□□□□□ -0.28
VCP-201ENST00000358901 GATA6Q92908 595 aa13.3□□□□□ -0.28
VCP-201ENST00000358901 CERS4Q9HA82 394 aa13.3□□□□□ -0.28
VCP-201ENST00000358901 MKL2Q9ULH7 1088 aa13.3□□□□□ -0.28
VCP-201ENST00000358901 CAPN14A8MX76 684 aa13.3□□□□□ -0.28
VCP-201ENST00000358901 ACTR1BP42025 376 aa13.3□□□□□ -0.28
VCP-201ENST00000358901 ACTR1AP61163 376 aa13.3□□□□□ -0.28
VCP-201ENST00000358901 CD83Q01151 205 aa13.3□□□□□ -0.28
VCP-201ENST00000358901 MEF2AQ02078 507 aaPredicted RBP13.3□□□□□ -0.28
VCP-201ENST00000358901 ST3GAL4Q11206 333 aa13.3□□□□□ -0.28
VCP-201ENST00000358901 CMPK2Q5EBM0 449 aa13.3□□□□□ -0.28
VCP-201ENST00000358901 TUBA3EQ6PEY2 450 aa13.3□□□□□ -0.28
VCP-201ENST00000358901 TAF8Q7Z7C8 310 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms