RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 ANXA8L1Q5VT79 327 aa17.12■□□□□ 0.33
RTN4-204ENST00000357732 PROX1Q92786 737 aa17.12■□□□□ 0.33
RTN4-204ENST00000357732 MRPL9Q9BYD2 267 aaKnown RBP17.12■□□□□ 0.33
RTN4-204ENST00000357732 ZBTB20Q9HC78 741 aaPredicted RBP17.12■□□□□ 0.33
RTN4-204ENST00000357732 SIRT5Q9NXA8 310 aa17.12■□□□□ 0.33
RTN4-204ENST00000357732 VPS29Q9UBQ0 182 aa17.12■□□□□ 0.33
RTN4-204ENST00000357732 RAPGEFL1Q9UHV5 662 aa17.12■□□□□ 0.33
RTN4-204ENST00000357732 ENOPH1Q9UHY7 261 aa17.12■□□□□ 0.33
RTN4-204ENST00000357732 KLK4Q9Y5K2 254 aa17.12■□□□□ 0.33
RTN4-204ENST00000357732 BACE2Q9Y5Z0 518 aa17.12■□□□□ 0.33
RTN4-204ENST00000357732 DIRAS1O95057 198 aa17.11■□□□□ 0.33
RTN4-204ENST00000357732 MED26O95402 600 aa17.11■□□□□ 0.33
RTN4-204ENST00000357732 IGSF6O95976 241 aa17.11■□□□□ 0.33
RTN4-204ENST00000357732 RPL17P18621 184 aaKnown RBP17.11■□□□□ 0.33
RTN4-204ENST00000357732 S100A1P23297 94 aa17.11■□□□□ 0.33
RTN4-204ENST00000357732 CCR7P32248 378 aa17.11■□□□□ 0.33
RTN4-204ENST00000357732 TPTEP56180 551 aa17.11■□□□□ 0.33
RTN4-204ENST00000357732 MAPK11Q15759 364 aa17.11■□□□□ 0.33
RTN4-204ENST00000357732 TM6SF2Q9BZW4 377 aa17.11■□□□□ 0.33
RTN4-204ENST00000357732 PCDH12Q9NPG4 1184 aa17.11■□□□□ 0.33
RTN4-204ENST00000357732 ABCB10Q9NRK6 738 aa17.11■□□□□ 0.33
RTN4-204ENST00000357732 HOXA2O43364 376 aa17.11■□□□□ 0.33
RTN4-204ENST00000357732 B3GALT4O96024 378 aa17.11■□□□□ 0.33
RTN4-204ENST00000357732 PTPN2P17706 415 aa17.11■□□□□ 0.33
RTN4-204ENST00000357732 LIMK1P53667 647 aa17.11■□□□□ 0.33
RTN4-204ENST00000357732 TPRG1LQ5T0D9 272 aa17.11■□□□□ 0.33
RTN4-204ENST00000357732 PDE12Q6L8Q7 609 aaKnown RBP17.11■□□□□ 0.33
RTN4-204ENST00000357732 TPRG1Q6ZUI0 275 aa17.11■□□□□ 0.33
RTN4-204ENST00000357732 PAF1Q8N7H5 531 aa17.11■□□□□ 0.33
RTN4-204ENST00000357732 BCL7CQ8WUZ0 217 aaPredicted RBP17.11■□□□□ 0.33
RTN4-204ENST00000357732 RNF38Q9H0F5 515 aa17.11■□□□□ 0.33
RTN4-204ENST00000357732 RUBCNLQ9H714 662 aa17.11■□□□□ 0.33
RTN4-204ENST00000357732 BRF2Q9HAW0 419 aa17.11■□□□□ 0.33
RTN4-204ENST00000357732 SACM1LQ9NTJ5 587 aa17.11■□□□□ 0.33
RTN4-204ENST00000357732 SPATA6Q9NWH7 488 aaPredicted RBP17.11■□□□□ 0.33
RTN4-204ENST00000357732 IFT52Q9Y366 437 aa17.11■□□□□ 0.33
RTN4-204ENST00000357732 PPIL1Q9Y3C6 166 aa17.11■□□□□ 0.33
RTN4-204ENST00000357732 PIKFYVEQ9Y2I7 2098 aa17.11■□□□□ 0.33
RTN4-204ENST00000357732 DEFA1P59665 94 aa17.1■□□□□ 0.33
RTN4-204ENST00000357732 DEFA3P59666 94 aa17.1■□□□□ 0.33
RTN4-204ENST00000357732 ZXDCQ2QGD7 858 aaPredicted RBP17.1■□□□□ 0.33
RTN4-204ENST00000357732 TIMM50Q3ZCQ8 353 aa17.1■□□□□ 0.33
RTN4-204ENST00000357732 STEAP3Q658P3 488 aa17.1■□□□□ 0.33
RTN4-204ENST00000357732 RNF180Q86T96 592 aa17.1■□□□□ 0.33
RTN4-204ENST00000357732 POC5Q8NA72 575 aa17.1■□□□□ 0.33
RTN4-204ENST00000357732 C11orf65Q8NCR3 313 aa17.1■□□□□ 0.33
RTN4-204ENST00000357732 ZNF675Q8TD23 568 aa17.1■□□□□ 0.33
RTN4-204ENST00000357732 CXorf40BQ96DE9 158 aa17.1■□□□□ 0.33
RTN4-204ENST00000357732 C11orf24Q96F05 449 aaPredicted RBP17.1■□□□□ 0.33
RTN4-204ENST00000357732 DUSP26Q9BV47 211 aa17.1■□□□□ 0.33
RTN4-204ENST00000357732 AFF4Q9UHB7 1163 aaKnown RBP17.1■□□□□ 0.33
RTN4-204ENST00000357732 PCDHGA3Q9Y5H0 932 aa17.1■□□□□ 0.33
RTN4-204ENST00000357732 C1orf226A1L170 272 aa17.1■□□□□ 0.33
RTN4-204ENST00000357732 HAT1O14929 419 aa17.1■□□□□ 0.33
RTN4-204ENST00000357732 SNPHO15079 494 aa17.1■□□□□ 0.33
RTN4-204ENST00000357732 SCAMP2O15127 329 aaKnown RBP17.1■□□□□ 0.33
RTN4-204ENST00000357732 ASNA1O43681 348 aa17.1■□□□□ 0.33
RTN4-204ENST00000357732 GALTP07902 379 aa17.1■□□□□ 0.33
RTN4-204ENST00000357732 POLR2EP19388 210 aaKnown RBP17.1■□□□□ 0.33
RTN4-204ENST00000357732 GADD45AP24522 165 aa17.1■□□□□ 0.33
RTN4-204ENST00000357732 RRM2P31350 389 aa17.1■□□□□ 0.33
RTN4-204ENST00000357732 SELENOWP63302 87 aa17.1■□□□□ 0.33
RTN4-204ENST00000357732 PCDH1Q08174 1060 aa17.1■□□□□ 0.33
RTN4-204ENST00000357732 SYT16Q17RD7 645 aa17.1■□□□□ 0.33
RTN4-204ENST00000357732 ATAD3BQ5T9A4 648 aa17.1■□□□□ 0.33
RTN4-204ENST00000357732 FAM124AQ86V42 546 aa17.1■□□□□ 0.33
RTN4-204ENST00000357732 FAM217AQ8IXS0 508 aa17.1■□□□□ 0.33
RTN4-204ENST00000357732 GPR26Q8NDV2 337 aa17.1■□□□□ 0.33
RTN4-204ENST00000357732 NPAP1Q9NZP6 1156 aa17.1■□□□□ 0.33
RTN4-204ENST00000357732 ZNF282Q9UDV7 671 aaPredicted RBP17.1■□□□□ 0.33
RTN4-204ENST00000357732 PNMA8BQ9ULN7 279 aaPredicted RBP17.1■□□□□ 0.33
RTN4-204ENST00000357732 FZD4Q9ULV1 537 aa17.1■□□□□ 0.33
RTN4-204ENST00000357732 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.1■□□□□ 0.331e-12■■□□□ 13.7
RTN4-204ENST00000357732 LYVE1Q9Y5Y7 322 aa17.1■□□□□ 0.33
RTN4-204ENST00000357732 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.09■□□□□ 0.332e-6■□□□□ 8.9
RTN4-204ENST00000357732 CHIT1Q13231 466 aa17.09■□□□□ 0.33
RTN4-204ENST00000357732 SLX4IPQ5VYV7 408 aa17.09■□□□□ 0.33
RTN4-204ENST00000357732 PRR23CQ6ZRP0 262 aa17.09■□□□□ 0.33
RTN4-204ENST00000357732 WDR20Q8TBZ3 569 aa17.09■□□□□ 0.33
RTN4-204ENST00000357732 GGHQ92820 318 aa17.09■□□□□ 0.33
RTN4-204ENST00000357732 SCRN2Q96FV2 425 aa17.09■□□□□ 0.33
RTN4-204ENST00000357732 TPD52L3Q96J77 140 aa17.09■□□□□ 0.33
RTN4-204ENST00000357732 CDADC1Q9BWV3 514 aa17.09■□□□□ 0.33
RTN4-204ENST00000357732 C6orf62Q9GZU0 229 aaPredicted RBP17.09■□□□□ 0.33
RTN4-204ENST00000357732 POLE4Q9NR33 117 aa17.09■□□□□ 0.33
RTN4-204ENST00000357732 SLC22A14Q9Y267 594 aa17.09■□□□□ 0.33
RTN4-204ENST00000357732 TNFRSF11BO00300 401 aa17.09■□□□□ 0.33
RTN4-204ENST00000357732 NBNO60934 754 aa17.09■□□□□ 0.33
RTN4-204ENST00000357732 AOC2O75106 756 aa17.09■□□□□ 0.33
RTN4-204ENST00000357732 ITGA2P17301 1181 aa17.09■□□□□ 0.33
RTN4-204ENST00000357732 ACSM2AQ08AH3 577 aa17.09■□□□□ 0.33
RTN4-204ENST00000357732 SLC13A2Q13183 592 aa17.09■□□□□ 0.33
RTN4-204ENST00000357732 RGNQ15493 299 aa17.09■□□□□ 0.33
RTN4-204ENST00000357732 COLEC12Q5KU26 742 aa17.09■□□□□ 0.33
RTN4-204ENST00000357732 ACSM2BQ68CK6 577 aa17.09■□□□□ 0.33
RTN4-204ENST00000357732 GPR153Q6NV75 609 aa17.09■□□□□ 0.33
RTN4-204ENST00000357732 USP45Q70EL2 814 aa17.09■□□□□ 0.33
RTN4-204ENST00000357732 ZNF367Q7RTV3 350 aa17.09■□□□□ 0.33
RTN4-204ENST00000357732 ZNF605Q86T29 641 aa17.09■□□□□ 0.33
RTN4-204ENST00000357732 RASGRP3Q8IV61 690 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms