RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 H7C417 338 aa12.51□□□□□ -0.41
SMC4-202ENST00000357388 CLIC1O00299 241 aa12.51□□□□□ -0.41
SMC4-202ENST00000357388 TGFB1I1O43294 461 aa12.51□□□□□ -0.41
SMC4-202ENST00000357388 NUDT7P0C024 238 aa12.51□□□□□ -0.41
SMC4-202ENST00000357388 BCKDHAP12694 445 aa12.51□□□□□ -0.41
SMC4-202ENST00000357388 FNTBP49356 437 aa12.51□□□□□ -0.41
SMC4-202ENST00000357388 CDH11P55287 796 aa12.51□□□□□ -0.41
SMC4-202ENST00000357388 ST3GAL3Q11203 375 aa12.51□□□□□ -0.41
SMC4-202ENST00000357388 MARVELD2Q8N4S9 558 aa12.51□□□□□ -0.41
SMC4-202ENST00000357388 OR5B17Q8NGF7 314 aa12.51□□□□□ -0.41
SMC4-202ENST00000357388 GPR152Q8TDT2 470 aa12.51□□□□□ -0.41
SMC4-202ENST00000357388 TSPEARQ8WU66 669 aa12.51□□□□□ -0.41
SMC4-202ENST00000357388 ZNF514Q96K75 400 aaPredicted RBP12.51□□□□□ -0.41
SMC4-202ENST00000357388 KREMEN1Q96MU8 473 aa12.51□□□□□ -0.41
SMC4-202ENST00000357388 CYP2S1Q96SQ9 504 aa12.51□□□□□ -0.41
SMC4-202ENST00000357388 C2orf74A8MZ97 194 aa12.5□□□□□ -0.41
SMC4-202ENST00000357388 HTRA2O43464 458 aaPredicted RBP12.5□□□□□ -0.41
SMC4-202ENST00000357388 PDYNP01213 254 aa12.5□□□□□ -0.41
SMC4-202ENST00000357388 H2AFB2P0C5Z0 115 aa12.5□□□□□ -0.41
SMC4-202ENST00000357388 PABPC4LP0CB38 370 aaKnown RBP12.5□□□□□ -0.41
SMC4-202ENST00000357388 MPIP34949 423 aa12.5□□□□□ -0.41
SMC4-202ENST00000357388 ZNF630Q2M218 657 aaPredicted RBP12.5□□□□□ -0.41
SMC4-202ENST00000357388 FUT10Q6P4F1 479 aa12.5□□□□□ -0.41
SMC4-202ENST00000357388 COMMD7Q86VX2 200 aa12.5□□□□□ -0.41
SMC4-202ENST00000357388 GID4Q8IVV7 300 aa12.5□□□□□ -0.41
SMC4-202ENST00000357388 ZNF527Q8NB42 609 aa12.5□□□□□ -0.41
SMC4-202ENST00000357388 SHKBP1Q8TBC3 707 aa12.5□□□□□ -0.41
SMC4-202ENST00000357388 TBX5Q99593 518 aa12.5□□□□□ -0.41
SMC4-202ENST00000357388 FAIMQ9NVQ4 179 aa12.5□□□□□ -0.41
SMC4-202ENST00000357388 MADDQ8WXG6 1647 aa12.5□□□□□ -0.41
SMC4-202ENST00000357388 RFPL2O75678 378 aa12.5□□□□□ -0.41
SMC4-202ENST00000357388 HTR1AP08908 422 aa12.5□□□□□ -0.41
SMC4-202ENST00000357388 HSD11B1P28845 292 aa12.5□□□□□ -0.41
SMC4-202ENST00000357388 HTR2BP41595 481 aa12.5□□□□□ -0.41
SMC4-202ENST00000357388 GSK3BP49841 420 aa12.5□□□□□ -0.41
SMC4-202ENST00000357388 SLC3A1Q07837 685 aa12.5□□□□□ -0.41
SMC4-202ENST00000357388 GANABQ14697 944 aaKnown RBP12.5□□□□□ -0.41
SMC4-202ENST00000357388 GTF2IRD2BQ6EKJ0 949 aa12.5□□□□□ -0.41
SMC4-202ENST00000357388 GTF2IRD2Q86UP8 949 aa12.5□□□□□ -0.41
SMC4-202ENST00000357388 FOXRED2Q8IWF2 684 aa12.5□□□□□ -0.41
SMC4-202ENST00000357388 TSTD1Q8NFU3 115 aa12.5□□□□□ -0.41
SMC4-202ENST00000357388 POTEKPQ9BYX7 375 aa12.5□□□□□ -0.41
SMC4-202ENST00000357388 ZNF696Q9H7X3 374 aa12.5□□□□□ -0.41
SMC4-202ENST00000357388 PAQR5Q9NXK6 330 aaPredicted RBP12.5□□□□□ -0.41
SMC4-202ENST00000357388 ARHGAP23Q9P227 1491 aa12.5□□□□□ -0.41
SMC4-202ENST00000357388 TRBV23OR9-2A0A075B6M9 112 aa12.5□□□□□ -0.41
SMC4-202ENST00000357388 A0A0G2JMP0 313 aa12.5□□□□□ -0.41
SMC4-202ENST00000357388 PCDH7O60245 1069 aa12.5□□□□□ -0.41
SMC4-202ENST00000357388 NMBRP28336 390 aa12.5□□□□□ -0.41
SMC4-202ENST00000357388 NSG1P42857 185 aa12.5□□□□□ -0.41
SMC4-202ENST00000357388 GBE1Q04446 702 aa12.5□□□□□ -0.41
SMC4-202ENST00000357388 SPIN3Q5JUX0 258 aa12.5□□□□□ -0.41
SMC4-202ENST00000357388 UBXN11Q5T124 520 aa12.5□□□□□ -0.41
SMC4-202ENST00000357388 OTOP2Q7RTS6 562 aa12.5□□□□□ -0.41
SMC4-202ENST00000357388 WDR53Q7Z5U6 358 aaPredicted RBP12.5□□□□□ -0.41
SMC4-202ENST00000357388 SLC22A15Q8IZD6 547 aa12.5□□□□□ -0.41
SMC4-202ENST00000357388 OR4M2Q8NGB6 313 aa12.5□□□□□ -0.41
SMC4-202ENST00000357388 OR10A4Q9H209 315 aa12.5□□□□□ -0.41
SMC4-202ENST00000357388 C12orf65Q9H3J6 166 aaKnown RBP12.5□□□□□ -0.41
SMC4-202ENST00000357388 DNAJC5Q9H3Z4 198 aa12.5□□□□□ -0.41
SMC4-202ENST00000357388 ZFP57Q9NU63 452 aa12.5□□□□□ -0.41
SMC4-202ENST00000357388 PADI3Q9ULW8 664 aa12.5□□□□□ -0.41
SMC4-202ENST00000357388 USP32Q8NFA0 1604 aa12.5□□□□□ -0.41
SMC4-202ENST00000357388 SMIM28A0A1B0GU29 152 aa12.5□□□□□ -0.41
SMC4-202ENST00000357388 EIF1AYO14602 144 aaKnown RBP12.5□□□□□ -0.41
SMC4-202ENST00000357388 CILPO75339 1184 aa12.5□□□□□ -0.41
SMC4-202ENST00000357388 EIF1AXP47813 144 aaKnown RBP12.5□□□□□ -0.41
SMC4-202ENST00000357388 RABL3Q5HYI8 236 aa12.5□□□□□ -0.41
SMC4-202ENST00000357388 KANK2Q63ZY3 851 aa12.5□□□□□ -0.41
SMC4-202ENST00000357388 EEF1DP3Q658K8 133 aa12.5□□□□□ -0.41
SMC4-202ENST00000357388 FAM198BQ6UWH4 519 aa12.5□□□□□ -0.41
SMC4-202ENST00000357388 IFNL1Q8IU54 200 aa12.5□□□□□ -0.41
SMC4-202ENST00000357388 MFSD3Q96ES6 412 aa12.5□□□□□ -0.41
SMC4-202ENST00000357388 TMEM185BQ9H7F4 350 aa12.5□□□□□ -0.41
SMC4-202ENST00000357388 EXTL2Q9UBQ6 330 aa12.5□□□□□ -0.41
SMC4-202ENST00000357388 NOX1Q9Y5S8 564 aa12.5□□□□□ -0.41
SMC4-202ENST00000357388 H0YGN5 161 aa12.49□□□□□ -0.41
SMC4-202ENST00000357388 CA12O43570 354 aa12.49□□□□□ -0.41
SMC4-202ENST00000357388 OR1F1O43749 312 aa12.49□□□□□ -0.41
SMC4-202ENST00000357388 GSTM2P28161 218 aa12.49□□□□□ -0.41
SMC4-202ENST00000357388 WDR4P57081 412 aaKnown RBP12.49□□□□□ -0.41
SMC4-202ENST00000357388 IL10RBQ08334 325 aa12.49□□□□□ -0.41
SMC4-202ENST00000357388 HNRNPA0Q13151 305 aaKnown RBP12.49□□□□□ -0.41
SMC4-202ENST00000357388 SFT2D3Q587I9 215 aa12.49□□□□□ -0.41
SMC4-202ENST00000357388 EPGNQ6UW88 154 aa12.49□□□□□ -0.41
SMC4-202ENST00000357388 SSX6Q7RTT6 188 aa12.49□□□□□ -0.41
SMC4-202ENST00000357388 P4HA3Q7Z4N8 544 aa12.49□□□□□ -0.41
SMC4-202ENST00000357388 SLC51AQ86UW1 340 aa12.49□□□□□ -0.41
SMC4-202ENST00000357388 NUDT13Q86X67 352 aa12.49□□□□□ -0.41
SMC4-202ENST00000357388 ARL14Q8N4G2 192 aa12.49□□□□□ -0.41
SMC4-202ENST00000357388 OSTF1Q92882 214 aa12.49□□□□□ -0.41
SMC4-202ENST00000357388 SLC35A5Q9BS91 424 aa12.49□□□□□ -0.41
SMC4-202ENST00000357388 EFCAB11Q9BUY7 163 aa12.49□□□□□ -0.41
SMC4-202ENST00000357388 SLC5A7Q9GZV3 580 aa12.49□□□□□ -0.41
SMC4-202ENST00000357388 EIF5A2Q9GZV4 153 aaKnown RBP12.49□□□□□ -0.41
SMC4-202ENST00000357388 BIN3Q9NQY0 253 aa12.49□□□□□ -0.41
SMC4-202ENST00000357388 TRBC2A0A5B9 178 aa12.49□□□□□ -0.41
SMC4-202ENST00000357388 TRAPPC13A5PLN9 417 aa12.49□□□□□ -0.41
SMC4-202ENST00000357388 ENGP17813 658 aa12.49□□□□□ -0.41
SMC4-202ENST00000357388 RAB39AQ14964 217 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms