RNA–Protein interactions for RNA: ENST00000356887.11

GYPC-202, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPC, Length 2,067 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-202ENST00000356887 SPOUT1Q5T280 376 aaKnown RBP17.07■□□□□ 0.32
GYPC-202ENST00000356887 CCDC81Q6ZN84 652 aa17.07■□□□□ 0.32
GYPC-202ENST00000356887 PRSS48Q7RTY5 328 aa17.07■□□□□ 0.32
GYPC-202ENST00000356887 ATG16L2Q8NAA4 619 aa17.07■□□□□ 0.32
GYPC-202ENST00000356887 DYNC2LI1Q8TCX1 351 aa17.07■□□□□ 0.32
GYPC-202ENST00000356887 GLMNQ92990 594 aa17.07■□□□□ 0.32
GYPC-202ENST00000356887 UBE2FQ969M7 185 aa17.07■□□□□ 0.32
GYPC-202ENST00000356887 TMEM169Q96HH4 297 aa17.07■□□□□ 0.32
GYPC-202ENST00000356887 ABHD8Q96I13 439 aa17.07■□□□□ 0.32
GYPC-202ENST00000356887 SPATA9Q9BWV2 254 aa17.07■□□□□ 0.32
GYPC-202ENST00000356887 ALOXE3Q9BYJ1 711 aa17.07■□□□□ 0.32
GYPC-202ENST00000356887 TPT1P8Q9HAU6 139 aa17.07■□□□□ 0.32
GYPC-202ENST00000356887 PCDH12Q9NPG4 1184 aa17.07■□□□□ 0.32
GYPC-202ENST00000356887 FBXO8Q9NRD0 319 aa17.07■□□□□ 0.32
GYPC-202ENST00000356887 THUMPD1Q9NXG2 353 aaKnown RBP17.07■□□□□ 0.32
GYPC-202ENST00000356887 KIF17Q9P2E2 1029 aa17.07■□□□□ 0.32
GYPC-202ENST00000356887 MTX2O75431 263 aa17.06■□□□□ 0.32
GYPC-202ENST00000356887 WBP4O75554 376 aaKnown RBP17.06■□□□□ 0.32
GYPC-202ENST00000356887 FADS2O95864 444 aaKnown RBP17.06■□□□□ 0.32
GYPC-202ENST00000356887 C9P02748 559 aa17.06■□□□□ 0.32
GYPC-202ENST00000356887 EFNA1P20827 205 aaPredicted RBP17.06■□□□□ 0.32
GYPC-202ENST00000356887 PSMB9P28065 219 aa17.06■□□□□ 0.32
GYPC-202ENST00000356887 HLA-FP30511 346 aa17.06■□□□□ 0.32
GYPC-202ENST00000356887 KRT20P35900 424 aa17.06■□□□□ 0.32
GYPC-202ENST00000356887 ST13P50502 369 aaKnown RBP17.06■□□□□ 0.32
GYPC-202ENST00000356887 NPRL3Q12980 569 aa17.06■□□□□ 0.32
GYPC-202ENST00000356887 DOC2AQ14183 400 aa17.06■□□□□ 0.32
GYPC-202ENST00000356887 SF1Q15637 639 aaKnown RBP17.06■□□□□ 0.32
GYPC-202ENST00000356887 DEFB128Q7Z7B8 93 aa17.06■□□□□ 0.32
GYPC-202ENST00000356887 THOC6Q86W42 341 aaKnown RBP17.06■□□□□ 0.32
GYPC-202ENST00000356887 CMTM8Q8IZV2 173 aa17.06■□□□□ 0.32
GYPC-202ENST00000356887 MFSD4AQ8N468 514 aa17.06■□□□□ 0.32
GYPC-202ENST00000356887 IPCEF1Q8WWN9 437 aaPredicted RBP17.06■□□□□ 0.32
GYPC-202ENST00000356887 ELMO1Q92556 727 aa17.06■□□□□ 0.32
GYPC-202ENST00000356887 MRPS31Q92665 395 aaKnown RBP17.06■□□□□ 0.32
GYPC-202ENST00000356887 SIGLEC11Q96RL6 698 aa17.06■□□□□ 0.32
GYPC-202ENST00000356887 MTERF1Q99551 399 aaKnown RBP17.06■□□□□ 0.32
GYPC-202ENST00000356887 EPYCQ99645 322 aa17.06■□□□□ 0.32
GYPC-202ENST00000356887 DUSP26Q9BV47 211 aa17.06■□□□□ 0.32
GYPC-202ENST00000356887 SLCO2B1O94956 709 aa17.06■□□□□ 0.32
GYPC-202ENST00000356887 ALDH4A1P30038 563 aa17.06■□□□□ 0.32
GYPC-202ENST00000356887 HPCAL1P37235 193 aa17.06■□□□□ 0.32
GYPC-202ENST00000356887 MNX1P50219 401 aaPredicted RBP17.06■□□□□ 0.32
GYPC-202ENST00000356887 CRYBA2P53672 197 aa17.06■□□□□ 0.32
GYPC-202ENST00000356887 ATN1P54259 1190 aaPredicted RBP17.06■□□□□ 0.32
GYPC-202ENST00000356887 RAE1P78406 368 aaKnown RBP17.06■□□□□ 0.32
GYPC-202ENST00000356887 KCNJ10P78508 379 aa17.06■□□□□ 0.32
GYPC-202ENST00000356887 BCL2A1Q16548 175 aa17.06■□□□□ 0.32
GYPC-202ENST00000356887 PROX2Q3B8N5 592 aa17.06■□□□□ 0.32
GYPC-202ENST00000356887 HS6ST3Q8IZP7 471 aa17.06■□□□□ 0.32
GYPC-202ENST00000356887 OR6Q1Q8NGQ2 317 aa17.06■□□□□ 0.32
GYPC-202ENST00000356887 PHF10Q8WUB8 498 aaKnown RBP17.06■□□□□ 0.32
GYPC-202ENST00000356887 SH3KBP1Q96B97 665 aa17.06■□□□□ 0.32
GYPC-202ENST00000356887 METTL2AQ96IZ6 378 aaKnown RBP17.06■□□□□ 0.32
GYPC-202ENST00000356887 BTBD2Q9BX70 525 aa17.06■□□□□ 0.32
GYPC-202ENST00000356887 CRISPLD2Q9H0B8 497 aa17.06■□□□□ 0.32
GYPC-202ENST00000356887 DAPK2Q9UIK4 370 aa17.06■□□□□ 0.32
GYPC-202ENST00000356887 BTNL2Q9UIR0 455 aa17.06■□□□□ 0.32
GYPC-202ENST00000356887 FZD4Q9ULV1 537 aa17.06■□□□□ 0.32
GYPC-202ENST00000356887 COL4A6Q14031 1691 aa17.05■□□□□ 0.32
GYPC-202ENST00000356887 C1orf226A1L170 272 aa17.05■□□□□ 0.32
GYPC-202ENST00000356887 GABRR3A8MPY1 467 aa17.05■□□□□ 0.32
GYPC-202ENST00000356887 E7EQ34 232 aa17.05■□□□□ 0.32
GYPC-202ENST00000356887 SCAMP2O15127 329 aaKnown RBP17.05■□□□□ 0.32
GYPC-202ENST00000356887 PQBP1O60828 265 aaKnown RBP17.05■□□□□ 0.32
GYPC-202ENST00000356887 URODP06132 367 aa17.05■□□□□ 0.32
GYPC-202ENST00000356887 NUDT7P0C024 238 aa17.05■□□□□ 0.32
GYPC-202ENST00000356887 GRK3P35626 688 aa17.05■□□□□ 0.32
GYPC-202ENST00000356887 SERPINB10P48595 397 aa17.05■□□□□ 0.32
GYPC-202ENST00000356887 CREMQ03060 361 aa17.05■□□□□ 0.32
GYPC-202ENST00000356887 ACSM2AQ08AH3 577 aa17.05■□□□□ 0.32
GYPC-202ENST00000356887 ACSM2BQ68CK6 577 aa17.05■□□□□ 0.32
GYPC-202ENST00000356887 CHST14Q8NCH0 376 aa17.05■□□□□ 0.32
GYPC-202ENST00000356887 CDC26Q8NHZ8 85 aa17.05■□□□□ 0.32
GYPC-202ENST00000356887 APH1BQ8WW43 257 aa17.05■□□□□ 0.32
GYPC-202ENST00000356887 ASZ1Q8WWH4 475 aa17.05■□□□□ 0.32
GYPC-202ENST00000356887 STARD8Q92502 1023 aa17.05■□□□□ 0.32
GYPC-202ENST00000356887 TPD52L3Q96J77 140 aa17.05■□□□□ 0.32
GYPC-202ENST00000356887 ZNF558Q96NG5 402 aa17.05■□□□□ 0.32
GYPC-202ENST00000356887 RASSF1Q9NS23 344 aa17.05■□□□□ 0.32
GYPC-202ENST00000356887 KIAA0100Q14667 2235 aaKnown RBP17.05■□□□□ 0.32
GYPC-202ENST00000356887 OR2A25A4D2G3 310 aa17.05■□□□□ 0.32
GYPC-202ENST00000356887 TRIM43BA6NCK2 446 aa17.05■□□□□ 0.32
GYPC-202ENST00000356887 ARHGEF33A8MVX0 844 aa17.05■□□□□ 0.32
GYPC-202ENST00000356887 TMEM229AB2RXF0 380 aa17.05■□□□□ 0.32
GYPC-202ENST00000356887 H0YIV9 168 aa17.05■□□□□ 0.32
GYPC-202ENST00000356887 PCDHGA12O60330 932 aa17.05■□□□□ 0.32
GYPC-202ENST00000356887 MYO1DO94832 1006 aa17.05■□□□□ 0.32
GYPC-202ENST00000356887 AP2A2O94973 939 aa17.05■□□□□ 0.32
GYPC-202ENST00000356887 GSTM1P09488 218 aa17.05■□□□□ 0.32
GYPC-202ENST00000356887 HSD3B1P14060 373 aa17.05■□□□□ 0.32
GYPC-202ENST00000356887 HSD3B2P26439 372 aa17.05■□□□□ 0.32
GYPC-202ENST00000356887 NCS1P62166 190 aa17.05■□□□□ 0.32
GYPC-202ENST00000356887 FADDQ13158 208 aa17.05■□□□□ 0.32
GYPC-202ENST00000356887 DDX39BQ13838 428 aaKnown RBP17.05■□□□□ 0.32
GYPC-202ENST00000356887 DGCR6Q14129 220 aa17.05■□□□□ 0.32
GYPC-202ENST00000356887 INAQ16352 499 aa17.05■□□□□ 0.32
GYPC-202ENST00000356887 PAGE2BQ5JRK9 111 aa17.05■□□□□ 0.32
GYPC-202ENST00000356887 CPTPQ5TA50 214 aa17.05■□□□□ 0.32
GYPC-202ENST00000356887 GRHL2Q6ISB3 625 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms