RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 ZNF701M0R085 212 aaPredicted RBP5.38□□□□□ -1.55
PTPRD-202ENST00000356435 TLR4O00206 839 aa5.38□□□□□ -1.55
PTPRD-202ENST00000356435 CCL22O00626 93 aa5.38□□□□□ -1.55
PTPRD-202ENST00000356435 HRH2P25021 359 aa5.38□□□□□ -1.55
PTPRD-202ENST00000356435 SHMT2P34897 504 aa5.38□□□□□ -1.55
PTPRD-202ENST00000356435 MAGEA2P43356 314 aa5.38□□□□□ -1.55
PTPRD-202ENST00000356435 ACSBG2Q5FVE4 666 aa5.38□□□□□ -1.55
PTPRD-202ENST00000356435 ARL9Q6T311 187 aa5.38□□□□□ -1.55
PTPRD-202ENST00000356435 ZNF782Q6ZMW2 699 aaPredicted RBP5.38□□□□□ -1.55
PTPRD-202ENST00000356435 ZNF709Q8N972 641 aa5.38□□□□□ -1.55
PTPRD-202ENST00000356435 DBF4BQ8NFT6 615 aa5.38□□□□□ -1.55
PTPRD-202ENST00000356435 SLC22A8Q8TCC7 542 aa5.38□□□□□ -1.55
PTPRD-202ENST00000356435 TMEM174Q8WUU8 243 aa5.38□□□□□ -1.55
PTPRD-202ENST00000356435 NANOS1Q8WY41 292 aaKnown RBP5.38□□□□□ -1.55
PTPRD-202ENST00000356435 RBP7Q96R05 134 aa5.38□□□□□ -1.55
PTPRD-202ENST00000356435 WDR77Q9BQA1 342 aaPredicted RBP5.38□□□□□ -1.55
PTPRD-202ENST00000356435 MND1Q9BWT6 205 aa5.38□□□□□ -1.55
PTPRD-202ENST00000356435 ANKRA2Q9H9E1 313 aa5.38□□□□□ -1.55
PTPRD-202ENST00000356435 FLRT1Q9NZU1 646 aa5.38□□□□□ -1.55
PTPRD-202ENST00000356435 MED11Q9P086 117 aa5.38□□□□□ -1.55
PTPRD-202ENST00000356435 CYTH4Q9UIA0 394 aa5.38□□□□□ -1.55
PTPRD-202ENST00000356435 INSL5Q9Y5Q6 135 aa5.38□□□□□ -1.55
PTPRD-202ENST00000356435 RAD51DO75771 328 aa5.38□□□□□ -1.55
PTPRD-202ENST00000356435 CLPXO76031 633 aa5.38□□□□□ -1.55
PTPRD-202ENST00000356435 HBQ1P09105 142 aa5.38□□□□□ -1.55
PTPRD-202ENST00000356435 PRPS1L1P21108 318 aa5.38□□□□□ -1.55
PTPRD-202ENST00000356435 MMP8P22894 467 aa5.38□□□□□ -1.55
PTPRD-202ENST00000356435 ASPAP45381 313 aa5.38□□□□□ -1.55
PTPRD-202ENST00000356435 YAP1P46937 504 aaKnown RBP5.38□□□□□ -1.55
PTPRD-202ENST00000356435 PRRT3Q5FWE3 981 aa5.38□□□□□ -1.55
PTPRD-202ENST00000356435 ZC3HC1Q86WB0 502 aaKnown RBP5.38□□□□□ -1.55
PTPRD-202ENST00000356435 ARHGAP12Q8IWW6 846 aa5.38□□□□□ -1.55
PTPRD-202ENST00000356435 FTMTQ8N4E7 242 aa5.38□□□□□ -1.55
PTPRD-202ENST00000356435 OR10Q1Q8NGQ4 319 aa5.38□□□□□ -1.55
PTPRD-202ENST00000356435 TMCO6Q96DC7 493 aa5.38□□□□□ -1.55
PTPRD-202ENST00000356435 OR2M4Q96R27 311 aa5.38□□□□□ -1.55
PTPRD-202ENST00000356435 SYT11Q9BT88 431 aa5.38□□□□□ -1.55
PTPRD-202ENST00000356435 MECRQ9BV79 373 aa5.38□□□□□ -1.55
PTPRD-202ENST00000356435 OR10A4Q9H209 315 aa5.38□□□□□ -1.55
PTPRD-202ENST00000356435 ELAC1Q9H777 363 aaKnown RBP5.38□□□□□ -1.55
PTPRD-202ENST00000356435 BRD7Q9NPI1 651 aa5.38□□□□□ -1.55
PTPRD-202ENST00000356435 SLC17A7Q9P2U7 560 aa5.38□□□□□ -1.55
PTPRD-202ENST00000356435 PACSIN3Q9UKS6 424 aa5.38□□□□□ -1.55
PTPRD-202ENST00000356435 POFUT2Q9Y2G5 429 aa5.38□□□□□ -1.55
PTPRD-202ENST00000356435 A0A1B0GVC2 190 aa5.38□□□□□ -1.55
PTPRD-202ENST00000356435 RAB28P51157 221 aa5.38□□□□□ -1.55
PTPRD-202ENST00000356435 CAV3P56539 151 aa5.38□□□□□ -1.55
PTPRD-202ENST00000356435 GNG2P59768 71 aa5.38□□□□□ -1.55
PTPRD-202ENST00000356435 HERVK_113P63132 956 aa5.38□□□□□ -1.55
PTPRD-202ENST00000356435 GRM2Q14416 872 aa5.38□□□□□ -1.55
PTPRD-202ENST00000356435 TMEM35AQ53FP2 167 aa5.38□□□□□ -1.55
PTPRD-202ENST00000356435 ZNF613Q6PF04 617 aa5.38□□□□□ -1.55
PTPRD-202ENST00000356435 ISLR2Q6UXK2 745 aa5.38□□□□□ -1.55
PTPRD-202ENST00000356435 TMPPEQ6ZT21 453 aa5.38□□□□□ -1.55
PTPRD-202ENST00000356435 LDB1Q86U70 411 aaPredicted RBP5.38□□□□□ -1.55
PTPRD-202ENST00000356435 DEFB119Q8N690 84 aa5.38□□□□□ -1.55
PTPRD-202ENST00000356435 FANK1Q8TC84 345 aa5.38□□□□□ -1.55
PTPRD-202ENST00000356435 SLC5A11Q8WWX8 675 aa5.38□□□□□ -1.55
PTPRD-202ENST00000356435 STRA6Q9BX79 667 aa5.38□□□□□ -1.55
PTPRD-202ENST00000356435 ERVK-6Q9BXR3 956 aa5.38□□□□□ -1.55
PTPRD-202ENST00000356435 ZNF69Q9UC07 566 aa5.38□□□□□ -1.55
PTPRD-202ENST00000356435 CNOT11Q9UKZ1 510 aaKnown RBP5.38□□□□□ -1.55
PTPRD-202ENST00000356435 FAM227AF5H4B4 570 aa5.38□□□□□ -1.55
PTPRD-202ENST00000356435 C2P06681 752 aa5.38□□□□□ -1.55
PTPRD-202ENST00000356435 HNRNPA1P09651 372 aaKnown RBP eCLIP5.38□□□□□ -1.55
PTPRD-202ENST00000356435 BCKDHAP12694 445 aa5.38□□□□□ -1.55
PTPRD-202ENST00000356435 TM4SF1P30408 202 aa5.38□□□□□ -1.55
PTPRD-202ENST00000356435 MAGEA12P43365 314 aa5.38□□□□□ -1.55
PTPRD-202ENST00000356435 GJA8P48165 433 aa5.38□□□□□ -1.55
PTPRD-202ENST00000356435 RORCP51449 518 aa5.38□□□□□ -1.55
PTPRD-202ENST00000356435 GRIK2Q13002 908 aa5.38□□□□□ -1.55
PTPRD-202ENST00000356435 ZFP69Q49AA0 526 aa5.38□□□□□ -1.55
PTPRD-202ENST00000356435 MRPL41Q8IXM3 137 aaKnown RBP5.38□□□□□ -1.55
PTPRD-202ENST00000356435 OR2AP1Q8NGE2 309 aa5.38□□□□□ -1.55
PTPRD-202ENST00000356435 ADAMTS18Q8TE60 1221 aa5.38□□□□□ -1.55
PTPRD-202ENST00000356435 RELTQ969Z4 430 aa5.38□□□□□ -1.55
PTPRD-202ENST00000356435 MKS1Q9NXB0 559 aa5.38□□□□□ -1.55
PTPRD-202ENST00000356435 EURLQ9NYK6 297 aa5.38□□□□□ -1.55
PTPRD-202ENST00000356435 ABCD2Q9UBJ2 740 aa5.38□□□□□ -1.55
PTPRD-202ENST00000356435 TNFRSF10DQ9UBN6 386 aa5.38□□□□□ -1.55
PTPRD-202ENST00000356435 AASSQ9UDR5 926 aa5.38□□□□□ -1.55
PTPRD-202ENST00000356435 GPR25O00155 361 aa5.38□□□□□ -1.55
PTPRD-202ENST00000356435 MMP20O60882 483 aa5.38□□□□□ -1.55
PTPRD-202ENST00000356435 GPR37L1O60883 481 aa5.38□□□□□ -1.55
PTPRD-202ENST00000356435 TRMUO75648 421 aaKnown RBP5.38□□□□□ -1.55
PTPRD-202ENST00000356435 FAM155BO75949 473 aa5.38□□□□□ -1.55
PTPRD-202ENST00000356435 NMBRP28336 390 aa5.38□□□□□ -1.55
PTPRD-202ENST00000356435 SLC10A7Q0GE19 358 aa5.38□□□□□ -1.55
PTPRD-202ENST00000356435 KCNC3Q14003 757 aa5.38□□□□□ -1.55
PTPRD-202ENST00000356435 DSG2Q14126 1118 aa5.38□□□□□ -1.55
PTPRD-202ENST00000356435 ALG10BQ5I7T1 473 aa5.38□□□□□ -1.55
PTPRD-202ENST00000356435 KIAA0319Q5VV43 1072 aa5.38□□□□□ -1.55
PTPRD-202ENST00000356435 OR4E2Q8NGC2 313 aa5.38□□□□□ -1.55
PTPRD-202ENST00000356435 OR5K1Q8NHB7 308 aa5.38□□□□□ -1.55
PTPRD-202ENST00000356435 NKD2Q969F2 451 aaPredicted RBP5.38□□□□□ -1.55
PTPRD-202ENST00000356435 KLHL15Q96M94 604 aa5.38□□□□□ -1.55
PTPRD-202ENST00000356435 DEFB126Q9BYW3 111 aa5.38□□□□□ -1.55
PTPRD-202ENST00000356435 IGSF9Q9P2J2 1179 aa5.38□□□□□ -1.55
PTPRD-202ENST00000356435 PIGBOS1A0A0B4J2F0 54 aa5.38□□□□□ -1.55
PTPRD-202ENST00000356435 PEPDP12955 493 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms