RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 RAET1GQ6H3X3 334 aa13.65□□□□□ -0.22
SREBF1-202ENST00000355815 OR4F3Q6IEY1 312 aa13.65□□□□□ -0.22
SREBF1-202ENST00000355815 ADGRG2Q8IZP9 1017 aa13.65□□□□□ -0.22
SREBF1-202ENST00000355815 FAM110BQ8TC76 370 aa13.65□□□□□ -0.22
SREBF1-202ENST00000355815 XAGE5Q8WWM1 108 aa13.65□□□□□ -0.22
SREBF1-202ENST00000355815 RASSF5Q8WWW0 418 aa13.65□□□□□ -0.22
SREBF1-202ENST00000355815 ITPAQ9BY32 194 aa13.65□□□□□ -0.22
SREBF1-202ENST00000355815 NANSQ9NR45 359 aa13.65□□□□□ -0.22
SREBF1-202ENST00000355815 KIAA1522Q9P206 1035 aaPredicted RBP13.65□□□□□ -0.22
SREBF1-202ENST00000355815 AGXTP21549 392 aa13.65□□□□□ -0.22
SREBF1-202ENST00000355815 MRPL10Q7Z7H8 261 aaKnown RBP13.65□□□□□ -0.22
SREBF1-202ENST00000355815 SVOPLQ8N434 492 aa13.65□□□□□ -0.22
SREBF1-202ENST00000355815 ZNF461Q8TAF7 563 aa13.65□□□□□ -0.22
SREBF1-202ENST00000355815 SLC22A17Q8WUG5 538 aa13.65□□□□□ -0.22
SREBF1-202ENST00000355815 PCNPQ8WW12 178 aaKnown RBP13.65□□□□□ -0.22
SREBF1-202ENST00000355815 NLNQ9BYT8 704 aa13.65□□□□□ -0.22
SREBF1-202ENST00000355815 MEAF6Q9HAF1 191 aa13.65□□□□□ -0.22
SREBF1-202ENST00000355815 CCM2LQ9NUG4 571 aaPredicted RBP13.65□□□□□ -0.22
SREBF1-202ENST00000355815 MAT2BQ9NZL9 334 aa13.65□□□□□ -0.22
SREBF1-202ENST00000355815 NUP50Q9UKX7 468 aa13.65□□□□□ -0.22
SREBF1-202ENST00000355815 STON1Q9Y6Q2 735 aa13.65□□□□□ -0.22
SREBF1-202ENST00000355815 TBC1D3BA6NDS4 549 aa13.65□□□□□ -0.22
SREBF1-202ENST00000355815 H3BM21 787 aa13.65□□□□□ -0.22
SREBF1-202ENST00000355815 ZNF195O14628 629 aa13.65□□□□□ -0.22
SREBF1-202ENST00000355815 C8AP07357 584 aa13.65□□□□□ -0.22
SREBF1-202ENST00000355815 POLR2LP62875 67 aaKnown RBP13.65□□□□□ -0.22
SREBF1-202ENST00000355815 HKDC1Q2TB90 917 aa13.65□□□□□ -0.22
SREBF1-202ENST00000355815 IDNKQ5T6J7 187 aa13.65□□□□□ -0.22
SREBF1-202ENST00000355815 DESI1Q6ICB0 168 aa13.65□□□□□ -0.22
SREBF1-202ENST00000355815 CERS6Q6ZMG9 384 aa13.65□□□□□ -0.22
SREBF1-202ENST00000355815 LMNTD1Q8N9Z9 388 aa13.65□□□□□ -0.22
SREBF1-202ENST00000355815 TBX5Q99593 518 aa13.65□□□□□ -0.22
SREBF1-202ENST00000355815 ZSCAN32Q9NX65 697 aa13.65□□□□□ -0.22
SREBF1-202ENST00000355815 COMMD9Q9P000 198 aa13.65□□□□□ -0.22
SREBF1-202ENST00000355815 BRWD3Q6RI45 1802 aa13.65□□□□□ -0.22
SREBF1-202ENST00000355815 KDELR3O43731 214 aa13.64□□□□□ -0.23
SREBF1-202ENST00000355815 PAPSS2O95340 614 aaPredicted RBP13.64□□□□□ -0.23
SREBF1-202ENST00000355815 STATHP02808 62 aa13.64□□□□□ -0.23
SREBF1-202ENST00000355815 SGSHP51688 502 aa13.64□□□□□ -0.23
SREBF1-202ENST00000355815 ERVPABLB-1P60509 514 aa13.64□□□□□ -0.23
SREBF1-202ENST00000355815 NFKB2Q00653 900 aa13.64□□□□□ -0.23
SREBF1-202ENST00000355815 SF1Q15637 639 aaKnown RBP13.64□□□□□ -0.23
SREBF1-202ENST00000355815 PTCHD3Q3KNS1 767 aa13.64□□□□□ -0.23
SREBF1-202ENST00000355815 XKR4Q5GH76 650 aa13.64□□□□□ -0.23
SREBF1-202ENST00000355815 NADSYN1Q6IA69 706 aa13.64□□□□□ -0.23
SREBF1-202ENST00000355815 FAM180BQ6P0A1 224 aa13.64□□□□□ -0.23
SREBF1-202ENST00000355815 Q6ZVL8 140 aa13.64□□□□□ -0.23
SREBF1-202ENST00000355815 CFAP206Q8IYR0 622 aa13.64□□□□□ -0.23
SREBF1-202ENST00000355815 ZNF486Q96H40 463 aaPredicted RBP13.64□□□□□ -0.23
SREBF1-202ENST00000355815 FCRL4Q96PJ5 515 aa13.64□□□□□ -0.23
SREBF1-202ENST00000355815 SLC22A12Q96S37 553 aa13.64□□□□□ -0.23
SREBF1-202ENST00000355815 FNDC11Q9BVV2 318 aa13.64□□□□□ -0.23
SREBF1-202ENST00000355815 DERL2Q9GZP9 239 aa13.64□□□□□ -0.23
SREBF1-202ENST00000355815 NLE1Q9NVX2 485 aaPredicted RBP13.64□□□□□ -0.23
SREBF1-202ENST00000355815 NUFIP1Q9UHK0 495 aaKnown RBP13.64□□□□□ -0.23
SREBF1-202ENST00000355815 SLC28A1O00337 649 aa13.64□□□□□ -0.23
SREBF1-202ENST00000355815 PLD2O14939 933 aa13.64□□□□□ -0.23
SREBF1-202ENST00000355815 SOX14O95416 240 aa13.64□□□□□ -0.23
SREBF1-202ENST00000355815 SBK3P0C264 359 aa13.64□□□□□ -0.23
SREBF1-202ENST00000355815 CKMT1AP12532 417 aa13.64□□□□□ -0.23
SREBF1-202ENST00000355815 RPA4Q13156 261 aa13.64□□□□□ -0.23
SREBF1-202ENST00000355815 SF3B4Q15427 424 aaKnown RBP eCLIP13.64□□□□□ -0.234e-10■■■■■ 29.4
SREBF1-202ENST00000355815 FNDC3BQ53EP0 1204 aaKnown RBP13.64□□□□□ -0.23
SREBF1-202ENST00000355815 TOR1AIP1Q5JTV8 583 aa13.64□□□□□ -0.23
SREBF1-202ENST00000355815 LRRC66Q68CR7 880 aa13.64□□□□□ -0.23
SREBF1-202ENST00000355815 CES5AQ6NT32 575 aa13.64□□□□□ -0.23
SREBF1-202ENST00000355815 LETMD1Q6P1Q0 360 aa13.64□□□□□ -0.23
SREBF1-202ENST00000355815 RSPO2Q6UXX9 243 aaPredicted RBP13.64□□□□□ -0.23
SREBF1-202ENST00000355815 DPY19L3Q6ZPD9 716 aa13.64□□□□□ -0.23
SREBF1-202ENST00000355815 OR6C4Q8NGE1 309 aa13.64□□□□□ -0.23
SREBF1-202ENST00000355815 NDNFQ8TB73 568 aa13.64□□□□□ -0.23
SREBF1-202ENST00000355815 YTHDF1Q9BYJ9 559 aaKnown RBP13.64□□□□□ -0.23
SREBF1-202ENST00000355815 IGFLR1Q9H665 355 aa13.64□□□□□ -0.23
SREBF1-202ENST00000355815 ELAC1Q9H777 363 aaKnown RBP13.64□□□□□ -0.23
SREBF1-202ENST00000355815 ABCG2Q9UNQ0 655 aa13.64□□□□□ -0.23
SREBF1-202ENST00000355815 CFAP20Q9Y6A4 193 aaKnown RBP13.64□□□□□ -0.23
SREBF1-202ENST00000355815 PER2O15055 1255 aa13.64□□□□□ -0.23
SREBF1-202ENST00000355815 FDXRP22570 491 aa13.64□□□□□ -0.23
SREBF1-202ENST00000355815 MYL9P24844 172 aa13.64□□□□□ -0.23
SREBF1-202ENST00000355815 PPP2R2BQ00005 443 aa13.64□□□□□ -0.23
SREBF1-202ENST00000355815 OR4A15Q8NGL6 344 aa13.64□□□□□ -0.23
SREBF1-202ENST00000355815 ZNF431Q8TF32 576 aaPredicted RBP13.64□□□□□ -0.23
SREBF1-202ENST00000355815 TNFAIP8L1Q8WVP5 186 aa13.64□□□□□ -0.23
SREBF1-202ENST00000355815 ZNF419Q96HQ0 510 aaPredicted RBP13.64□□□□□ -0.23
SREBF1-202ENST00000355815 SGIP1Q9BQI5 828 aa13.64□□□□□ -0.23
SREBF1-202ENST00000355815 FAM83DQ9H4H8 585 aa13.64□□□□□ -0.23
SREBF1-202ENST00000355815 SGK2Q9HBY8 427 aa13.64□□□□□ -0.23
SREBF1-202ENST00000355815 NUDT4Q9NZJ9 180 aa13.64□□□□□ -0.23
SREBF1-202ENST00000355815 AP3M1Q9Y2T2 418 aa13.64□□□□□ -0.23
SREBF1-202ENST00000355815 PCDHB1Q9Y5F3 818 aa13.64□□□□□ -0.23
SREBF1-202ENST00000355815 VIPP01282 170 aa13.64□□□□□ -0.23
SREBF1-202ENST00000355815 ITGA2P17301 1181 aa13.64□□□□□ -0.23
SREBF1-202ENST00000355815 ADRA1AP35348 466 aa13.64□□□□□ -0.23
SREBF1-202ENST00000355815 STAT5AP42229 794 aa13.64□□□□□ -0.23
SREBF1-202ENST00000355815 RORCP51449 518 aa13.64□□□□□ -0.23
SREBF1-202ENST00000355815 RPS14P62263 151 aaKnown RBP13.64□□□□□ -0.23
SREBF1-202ENST00000355815 A0A1B0GTL3 188 aa13.63□□□□□ -0.23
SREBF1-202ENST00000355815 FAM234BA2RU67 622 aa13.63□□□□□ -0.23
SREBF1-202ENST00000355815 TNFRSF10BO14763 440 aa13.63□□□□□ -0.23
SREBF1-202ENST00000355815 MITFO75030 526 aaPredicted RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms