RNA–Protein interactions for RNA: ENST00000355451.7

NUDCD3-202, Transcript of NudC domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUDCD3, Length 8,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-202ENST00000355451 ARNT2Q9HBZ2 717 aa11.21□□□□□ -0.61
NUDCD3-202ENST00000355451 PCDHB14Q9Y5E9 798 aa11.21□□□□□ -0.61
NUDCD3-202ENST00000355451 MYH8P13535 1937 aa11.21□□□□□ -0.61
NUDCD3-202ENST00000355451 ZNF705EA8MWA4 302 aaPredicted RBP11.21□□□□□ -0.61
NUDCD3-202ENST00000355451 KCNC1P48547 511 aa11.21□□□□□ -0.61
NUDCD3-202ENST00000355451 RNF4P78317 190 aa11.21□□□□□ -0.61
NUDCD3-202ENST00000355451 CHIT1Q13231 466 aa11.21□□□□□ -0.61
NUDCD3-202ENST00000355451 ELOCQ15369 112 aa11.21□□□□□ -0.61
NUDCD3-202ENST00000355451 C3orf38Q5JPI3 329 aa11.21□□□□□ -0.61
NUDCD3-202ENST00000355451 CYB5D2Q8WUJ1 264 aa11.21□□□□□ -0.61
NUDCD3-202ENST00000355451 CNTNAP1P78357 1384 aa11.21□□□□□ -0.61
NUDCD3-202ENST00000355451 A8MXE2 369 aa11.21□□□□□ -0.61
NUDCD3-202ENST00000355451 BOLA2-SMG1P6H3BVE0 249 aa11.21□□□□□ -0.61
NUDCD3-202ENST00000355451 OXSR1O95747 527 aaPredicted RBP11.21□□□□□ -0.61
NUDCD3-202ENST00000355451 C8GP07360 202 aa11.21□□□□□ -0.61
NUDCD3-202ENST00000355451 EFNA1P20827 205 aaPredicted RBP11.21□□□□□ -0.61
NUDCD3-202ENST00000355451 HSPA7P48741 367 aa11.21□□□□□ -0.61
NUDCD3-202ENST00000355451 NDUFA6P56556 154 aa11.21□□□□□ -0.61
NUDCD3-202ENST00000355451 DLG4P78352 724 aa11.21□□□□□ -0.61
NUDCD3-202ENST00000355451 ZPBP2Q6X784 338 aa11.21□□□□□ -0.61
NUDCD3-202ENST00000355451 SLC24A5Q71RS6 500 aa11.21□□□□□ -0.61
NUDCD3-202ENST00000355451 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.21□□□□□ -0.612e-6■■□□□ 11.5
NUDCD3-202ENST00000355451 PFDN5Q99471 154 aa11.21□□□□□ -0.61
NUDCD3-202ENST00000355451 PSAT1Q9Y617 370 aa11.21□□□□□ -0.61
NUDCD3-202ENST00000355451 H0Y8G0 127 aa11.21□□□□□ -0.62
NUDCD3-202ENST00000355451 APOC4-APOC2K7ER74 178 aa11.21□□□□□ -0.62
NUDCD3-202ENST00000355451 APOC2P02655 101 aa11.21□□□□□ -0.62
NUDCD3-202ENST00000355451 PTGS2P35354 604 aa11.21□□□□□ -0.62
NUDCD3-202ENST00000355451 DAGLBQ8NCG7 672 aa11.21□□□□□ -0.62
NUDCD3-202ENST00000355451 OR9A4Q8NGU2 314 aa11.21□□□□□ -0.62
NUDCD3-202ENST00000355451 VCPIP1Q96JH7 1222 aa11.21□□□□□ -0.62
NUDCD3-202ENST00000355451 TMED9Q9BVK6 235 aa11.21□□□□□ -0.62
NUDCD3-202ENST00000355451 EURLQ9NYK6 297 aa11.21□□□□□ -0.62
NUDCD3-202ENST00000355451 ARHGEF40Q8TER5 1519 aa11.21□□□□□ -0.62
NUDCD3-202ENST00000355451 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.21□□□□□ -0.62
NUDCD3-202ENST00000355451 ABLIM1O14639 778 aa11.21□□□□□ -0.62
NUDCD3-202ENST00000355451 VILLO15195 856 aa11.21□□□□□ -0.62
NUDCD3-202ENST00000355451 MSI1O43347 362 aaKnown RBP11.21□□□□□ -0.62
NUDCD3-202ENST00000355451 TNFSF12O43508 249 aa11.21□□□□□ -0.62
NUDCD3-202ENST00000355451 DUX1O43812 170 aa11.21□□□□□ -0.62
NUDCD3-202ENST00000355451 H2BFMP0C1H6 154 aa11.21□□□□□ -0.62
NUDCD3-202ENST00000355451 TMEM71Q6P5X7 295 aa11.21□□□□□ -0.62
NUDCD3-202ENST00000355451 UNC93AQ86WB7 457 aa11.21□□□□□ -0.62
NUDCD3-202ENST00000355451 ARL14EPQ8N8R7 260 aaPredicted RBP11.21□□□□□ -0.62
NUDCD3-202ENST00000355451 TMIEQ8NEW7 156 aa11.21□□□□□ -0.62
NUDCD3-202ENST00000355451 OR51D1Q8NGF3 324 aa11.21□□□□□ -0.62
NUDCD3-202ENST00000355451 S100A16Q96FQ6 103 aaKnown RBP11.21□□□□□ -0.62
NUDCD3-202ENST00000355451 P2RX2Q9UBL9 471 aa11.21□□□□□ -0.62
NUDCD3-202ENST00000355451 CFAP20Q9Y6A4 193 aaKnown RBP11.21□□□□□ -0.62
NUDCD3-202ENST00000355451 STATHP02808 62 aa11.21□□□□□ -0.62
NUDCD3-202ENST00000355451 DEFA4P12838 97 aa11.21□□□□□ -0.62
NUDCD3-202ENST00000355451 AMY2BP19961 511 aa11.21□□□□□ -0.62
NUDCD3-202ENST00000355451 MAPK3P27361 379 aaPredicted RBP11.21□□□□□ -0.62
NUDCD3-202ENST00000355451 CHPT1Q8WUD6 406 aa11.21□□□□□ -0.62
NUDCD3-202ENST00000355451 STYXQ8WUJ0 223 aa11.21□□□□□ -0.62
NUDCD3-202ENST00000355451 TRIB2Q92519 343 aa11.21□□□□□ -0.62
NUDCD3-202ENST00000355451 C7orf50Q9BRJ6 194 aaKnown RBP11.21□□□□□ -0.62
NUDCD3-202ENST00000355451 CLK4Q9HAZ1 481 aaKnown RBP11.21□□□□□ -0.62
NUDCD3-202ENST00000355451 COPZ2Q9P299 210 aa11.21□□□□□ -0.62
NUDCD3-202ENST00000355451 A0A0A6YYH2 397 aa11.2□□□□□ -0.62
NUDCD3-202ENST00000355451 A6NJ64 397 aa11.2□□□□□ -0.62
NUDCD3-202ENST00000355451 CDK2AP1O14519 115 aa11.2□□□□□ -0.62
NUDCD3-202ENST00000355451 AXIN1O15169 862 aa11.2□□□□□ -0.62
NUDCD3-202ENST00000355451 CLCN4P51793 760 aa11.2□□□□□ -0.62
NUDCD3-202ENST00000355451 PAN3Q58A45 887 aaKnown RBP11.2□□□□□ -0.62
NUDCD3-202ENST00000355451 CPNE9Q8IYJ1 553 aa11.2□□□□□ -0.62
NUDCD3-202ENST00000355451 TBC1D21Q8IYX1 336 aa11.2□□□□□ -0.62
NUDCD3-202ENST00000355451 TRAM1L1Q8N609 369 aa11.2□□□□□ -0.62
NUDCD3-202ENST00000355451 MBOAT7Q96N66 472 aa11.2□□□□□ -0.62
NUDCD3-202ENST00000355451 OR2M4Q96R27 311 aa11.2□□□□□ -0.62
NUDCD3-202ENST00000355451 PITX2Q99697 317 aa11.2□□□□□ -0.62
NUDCD3-202ENST00000355451 FZD1Q9UP38 647 aa11.2□□□□□ -0.62
NUDCD3-202ENST00000355451 TMX2Q9Y320 296 aa11.2□□□□□ -0.62
NUDCD3-202ENST00000355451 NPFFR2Q9Y5X5 522 aa11.2□□□□□ -0.62
NUDCD3-202ENST00000355451 RNF215Q9Y6U7 377 aa11.2□□□□□ -0.62
NUDCD3-202ENST00000355451 ZNF891A8MT65 544 aaPredicted RBP11.2□□□□□ -0.62
NUDCD3-202ENST00000355451 RORCP51449 518 aa11.2□□□□□ -0.62
NUDCD3-202ENST00000355451 PLA2G7Q13093 441 aa11.2□□□□□ -0.62
NUDCD3-202ENST00000355451 TIGD2Q4W5G0 525 aa11.2□□□□□ -0.62
NUDCD3-202ENST00000355451 CYP2U1Q7Z449 544 aa11.2□□□□□ -0.62
NUDCD3-202ENST00000355451 ATF6BQ99941 703 aa11.2□□□□□ -0.62
NUDCD3-202ENST00000355451 TUBB1Q9H4B7 451 aa11.2□□□□□ -0.62
NUDCD3-202ENST00000355451 CDK12Q9NYV4 1490 aaPredicted RBP11.2□□□□□ -0.62
NUDCD3-202ENST00000355451 MAGEB17A8MXT2 336 aa11.2□□□□□ -0.62
NUDCD3-202ENST00000355451 TP53P04637 393 aaPredicted RBP11.2□□□□□ -0.62
NUDCD3-202ENST00000355451 ST3GAL1Q11201 340 aa11.2□□□□□ -0.62
NUDCD3-202ENST00000355451 GANABQ14697 944 aaKnown RBP11.2□□□□□ -0.62
NUDCD3-202ENST00000355451 RFWD3Q6PCD5 774 aa11.2□□□□□ -0.62
NUDCD3-202ENST00000355451 PIWIL4Q7Z3Z4 852 aaKnown RBP11.2□□□□□ -0.62
NUDCD3-202ENST00000355451 ADGRD2Q7Z7M1 963 aa11.2□□□□□ -0.62
NUDCD3-202ENST00000355451 RANBP3Q9H6Z4 567 aaPredicted RBP11.2□□□□□ -0.62
NUDCD3-202ENST00000355451 SMCO4Q9NRQ5 59 aa11.2□□□□□ -0.62
NUDCD3-202ENST00000355451 EMC3Q9P0I2 261 aa11.2□□□□□ -0.62
NUDCD3-202ENST00000355451 MYEF2Q9P2K5 600 aaKnown RBP11.2□□□□□ -0.62
NUDCD3-202ENST00000355451 PEX16Q9Y5Y5 336 aa11.2□□□□□ -0.62
NUDCD3-202ENST00000355451 B3GALT1Q9Y5Z6 326 aa11.2□□□□□ -0.62
NUDCD3-202ENST00000355451 D6RAR5 112 aa11.2□□□□□ -0.62
NUDCD3-202ENST00000355451 IFI30P13284 250 aa11.2□□□□□ -0.62
NUDCD3-202ENST00000355451 HOXA9P31269 272 aa11.2□□□□□ -0.62
NUDCD3-202ENST00000355451 DGKQP52824 942 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms